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Oryza sativa
cluster # 13437 cluster # 13437       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13437#0 length = 1088 sequences # 10  
consensus_13437#1 length = 510 sequences # 2  
consensus_13437#2 length = 171 sequences # 1  

consensusID : consensus_13437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1088
fasta sequence
                              [GCGAAGCTCCTCGTCGTCAGAATCCGCGAAAACATCGCCACCACCACGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGCGGCGGAGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCTCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGATGCCAGCA-CCGTACCCACAAGCACCAC-TTGCCCCCTTCCACCATGCCCAGGGGCAAG-CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAA-CCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTG--CAAAAAACTAAAAAGA]

[+] EMBL AK102951             [GCGAAGCTCCTCGTCGTCAGAATCCGCGAAAACATCGCCACCACCACGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGCGGCGGAGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCTCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGATGCCAGCA CCGTACCCACAAGCACCAC TTGCCCCCTTCCACCATGCCCAGGGGCAAG CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAA CCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCT                           ]
[+] EMBL CA758908             [                                   CGCCACCACCACGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGCGGCGGAGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCTCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB672177             [                                                                                       CCCGGCCTACGGCGGCGGCGGAGGCGGCGGAGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCTCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGATGCCAGCA CCGTACCCACAAGCACCAC TTGCCCCCTTCCACCATGCCCAGGGGCAAG CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAACCCTG AACCGCTTAGTTGCTCAATCC                                                                                                                                                                                               ]
[+] EMBL C99352               [                                                                                                                                                                                                  CCTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTNTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTNATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAA CAGCTAAAGGATACTAACGAGAGTNTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCANCCCACATTGATGCCAGCA CCGTACCCACAAG                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU094305             [                                                                                                                                                                                                   CTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTTCAGCCTACATGCCTNACCCCACATTGATGCCAGCACCCGTACCCACAAGCACCACTTTGCCCCCTTCCACCATGCCCAAGGGCAAGCCCGCGGGGCAGAAGCTGATGATGCCTTTTGGTGGATACCCGGGGTACCCGATGTGGCAAGTCATGCCGGCTTtcc                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AY224458             [                                                                                                                                                                                                    TTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGATGCCAGCA CCGTACCCACAAGCACCAC TTGCCCCCTTCCACCATGCCCAGGGGCAAG CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCC                                                                                                                                                                                                                                                                       ]
[-] EMBL CB672178             [                                                                                                                                                                                                                                                                                                          CGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGATGCCAGCA CCGTACCCACAAGCACCAC TTGCCCCCTTCCACCATGCCCAGGGGCAAG CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAA CCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTG  CAAAAAACTAAAAAGA]
[+] EMBL BE228248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cgcgcacGAGGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGATGCCAGCA CCGTACCCACAAGCACCAC TTGCCCCCTTCCACCATGCCCAGGGGCAAG CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAA CCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTNCAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCT                           ]
[+] EMBL OS0905A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACATGCCTCACCCCACATTGATGCCAGCA CCGTACCCACAAGCACCAC TTGCCCCCTTCCACCATGCCCAGGGGCAAG CCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGTNGNCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAA CCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGT                                                                                                                                             ]
[+] EMBL C99004               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         aAAACTGATGATGCCTTTTGGTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAACGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAA CCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTGGNGAAAAAAa        ]


>consensus_13437#0 GCGAAGCTCCTCGTCGTCAGAATCCGCGAAAACATCGCCACCACCACGAGAGGAGGAGGA GGAGAGCGCGGCGGCGATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGCGGCGGAGG CGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCTCGAGGACCTCCCGGC GGCCGCGTGCGGGGCCTTCCCGTGGGACGCATCCCCGTCCTGCTCCAACCCGAGTGTGGA AGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAACCTGGCAGTAATAAACG TGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCCAGGGAAAAGATCAGAAG AGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTGGAGCCTGGGAAGCCAGT AAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATGGTAATTCAACTTCGTGC TGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGATAAGATTAAAGAACTGAA GGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAAGTAGAGAAGGAGACATT AGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATGCCTCACCCCACATTGAT GCCAGCACCGTACCCACAAGCACCACTTGCCCCCTTCCACCATGCCCAGGGGCAAGCCGC GGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCAT GCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATG CTTCATCGGTTGCGTTATGTGAATTAATCGTAACCTGAAACCGCTTAGTTGCTCAATCCA TTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGT TTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAA TGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTGCAAAAAAC TAAAAAGA



consensusID : consensus_13437#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 510
fasta sequence
                              [CCACTTGCCCCCTTCCACCATGCCCAGGGGNAAGCCGCGGGGCAGAAGCTGATGATGCC-TTTTGTTGGANACCCGGGGTACCCGATNTGGCAGTTCATGCCGCCTTCCCGAAGTCGACACCTCCAAGGACNGCGAAGCGTGCCCNCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAACCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTGCAGACACCCGGTGTCAAATTCAGTAGCATCATATACACCATTTCTTATCACCCAAAAACTGTTTGTCTTGTATGCTGTTTTATGTAATTTAACCAATCGATACAAATCTTGTTAAAAAA]

[+] EMBL C98165               [CCACTTGCCCCCTTCCACCATGCCCAGGGGNAAGCCGCGGGGCAGAAGCTGATGATGCC TTTTGTTGGANACCCGGGGTACCCGATNTGGCAGTTCATGCCGCCTTCCCGAAGTCGACACCTCCAAGGACNGCGAAGCGTGCCCNCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAACCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTGCAGACACCCGGTGTCAAATTCAGTAGCATCATATACACCATTTCTTATCACCCAAAAA                                                             ]
[+] EMBL C99351               [           CTTCCACNATGCCCNGGGGCAAGCCGCGGGGCAGAAGCTGATGATGCCTTTTTGTTGGATACCCGGGGTACCCGATGTGGCAGTTCATGCCGCCTT CCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGCCCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAACCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCTTGTTCTCTGCAGACACCCGGTGTCAAATTCAGTAGCATNATATACACCATTTCTTATCACCCAAATTCTGTTTGTCTTGTATGCTGTTTTATGTAATTTAACCAATCGATACAAATCTTGTTAAAAAA]


>consensus_13437#1 CCACTTGCCCCCTTCCACCATGCCCAGGGGNAAGCCGCGGGGCAGAAGCTGATGATGCCT TTTGTTGGANACCCGGGGTACCCGATNTGGCAGTTCATGCCGCCTTCCCGAAGTCGACAC CTCCAAGGACNGCGAAGCGTGCCCNCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTG AATTAATCGTAACCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCC TGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGA CATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGG AGAAAGGAAGAATGCTCATTCTTGTTCTCTGCAGACACCCGGTGTCAAATTCAGTAGCAT CATATACACCATTTCTTATCACCCAAAAACTGTTTGTCTTGTATGCTGTTTTATGTAATT TAACCAATCGATACAAATCTTGTTAAAAAA



consensusID : consensus_13437#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 171
fasta sequence
                              [GTCAGAATCCGCGAAAACATCGCCACCACCACGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCNCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTG]

[+] EMBL CF196933             [GTCAGAATCCGCGAAAACATCGCCACCACCACGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCNCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTG]


>consensus_13437#2 GTCAGAATCCGCGAAAACATCGCCACCACCACGAGAGGAGGAGGAGGAGAGCGCGGCGGC GATGTCCGGTACCCCGGCGGACGGCGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGA CTGCGGCATCCNCGAGGACCTCCCGGCGGCCGCGTGCGGGGCCTTCCCGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13437#0      -----------GCGAAGCTCCTCGTCGTCAGAATCCGCGA---AAACATCGCCACCACCA 46
consensus_13437#2      --------------------------GTCAGAATCCGCGA---AAACATCGCCACCACCA 31
consensus_13437#1      CCACTTGCCCCCTTCCACCATGCCCAGGGGNAAGCCGCGGGGCAGAAGCTGATGATGCCT 60
                                                 *    ** *****    * *    *      ** 

consensus_13437#0      CGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCG-GTACCCCGGCGGACGGCGGCGG 105
consensus_13437#2      CGAGAGGAGGAGGAGGAGAGCGCGGCGGCGATGTCCG-GTACCCCGGCGGACGGCGGCGG 90
consensus_13437#1      TTTGTTGGANACCCGGGGTACCCGATNTGGCAGTTCATGCCGCCTTCCCGAAGTCGACAC 120
                          *  *   *   ** *  * **     *  ** *  *   **   * ** * ** *  

consensus_13437#0      CGGAGGCGGCGGAGGCGGCGGAGGGAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCT 165
consensus_13437#2      CGGAGG------------------GAGCGGGGACGACTGGTTCCTCGACTGCGGCATCCN 132
consensus_13437#1      CTCCAAGGACNGCGAAGCGTGCCCNCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTG 180
                       *                           *  *   * ** *** ***  ****  **   

consensus_13437#0      CGAGGACCTC--CCGGCGGCCGCGTGCGGGGCCTTCCCGTGGGACGCATCCCCGTCCTGC 223
consensus_13437#2      CGAGGACCTC--CCGGCGGCCGCGTGCGGGGCCTTCCCGTG------------------- 171
consensus_13437#1      AATTAATCGTAACCTGAAACCGCTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCC 240
                            * *    ** *   **** *    *  *   ** *                    

consensus_13437#0      TCCAACCCGAGTGTGGAAGTAAGCAGCTATGTGAACACCACCTCTTATGTCCTCAAGGAA 283
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      TGATTCACATTCACTATTGTTCTTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGA 300
                                                                                   

consensus_13437#0      CCTGGCAGTAATAAACGTGTAAGGTCAGGGTCTTGTGGTAGGCCAACATCAAAAGCTTCC 343
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      CATTTGTGGCGCTCTATAGAGGCTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGG 360
                                                                                   

consensus_13437#0      AGGGAAAAGATCAGAAGAGATAAGATGAATGATAGGTTTCTTGAATTGGGGACTACTTTG 403
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      AGAAAGGAAGAATGCTCATTCTTGTTCTCTGCAGACACCCGGTGTCAAATTCAGTAGCAT 420
                                                                                   

consensus_13437#0      GAGCCTGGGAAGCCAGTAAAATCTGACAAAGCTGCTATCCTAAGTGATGCCACTCGCATG 463
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      CATATACACCATTTCTTATCACCCAAAAACTGTTTGTCTTGTATGCTGTTTTATGTAATT 480
                                                                                   

consensus_13437#0      GTAATTCAACTTCGTGCTGAAGCGAAGCAGCTAAAGGATACTAACGAGAGTCTTGAAGAT 523
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      TAACCAATCGATACAAATCTTGTTAAAAAA------------------------------ 510
                                                                                   

consensus_13437#0      AAGATTAAAGAACTGAAGGCAGAGAAGGACGAGCTTCGTGATGAGAAGCAGAAGCTGAAA 583
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      GTAGAGAAGGAGACATTAGAGCAGCAGGTGAAGATTCTGACTGCAACTCCAGCCTACATG 643
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      CCTCACCCCACATTGATGCCAGCACCGTACCCACAAGCACCACTTGCCCCCTTCCACCAT 703
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      GCCCAGGGGCAAGCCGCGGGGCAGAAGCTGATGATGCCTTTTGTTGGATACCCGGGGTAC 763
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      CCGATGTGGCAGTTCATGCCGCCTTCCGAAGTCGACACCTCCAAGGACAGCGAAGCGTGC 823
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      CCGCCTGTCGCGTAATGCTTCATCGGTTGCGTTATGTGAATTAATCGTAACCTGAAACCG 883
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      CTTAGTTGCTCAATCCATTGGTTGGGCATCGTCGTCCCTGATTCACATTCACTATTGTTC 943
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      TTGTGTTAGTAGTTCGTTTTTGTATGGAAGTAAGCTGACATTTGTGGCGCTCTATAGAGG 1003
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      CTACTGCCCCCTTTTAATGTACAATACAATTTTTCCGGAGAAAGGAAGAATGCTCATTCT 1063
consensus_13437#2      ------------------------------------------------------------
consensus_13437#1      ------------------------------------------------------------
                                                                                   

consensus_13437#0      TGTTCTCTGCAAAAAACTAAAAAGA 1088
consensus_13437#2      -------------------------
consensus_13437#1      -------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)