These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1967 fasta sequence [AGCTCGCCCCCCACCACCCCCTCGCGCGCGGCCCCCACCCACCCCACCCTCGCAGACATCACCGCCGCCCACCGTTCCCATCGCCGCCGCCGTCCTCTCCCCCGCCCGCGCCTATATCATCTTCTCCCCCCCACCCTCGCGTACAGCAACGCATGCCCCCCCTCCTCCCCTCCCCTCCCGCTCGCCGCCATTGACCGAGCGATCTGCTGCCTCGCTCGCGAACTCCTACCCCGCCCGAGCCCGAGCCCAGGCCGTGGCCGCCGCGAGATCTCCGGCTGCTTTTCAGGTATGGTCGCCGCCTCCGGCCTCGCGCCGCCGCGGCTGGCGGTCTCCTGCCCGCGTGCAGGCGGGGCGCGGCTGAGGCGGACACCACCGGGTTGGCTTCCTCCGATCCGCTCCCGTGGCGTTGGCGGGGCCCGCGGCCGCGCAGCTCCGGTGCTGCGCCTCCACCGTCGACGACGGCGTCGTCTCCGCCGCGGCGGCCCCCAAGCCCCGCCTCCCCAGGGTCGTCGGTATGGGTTCAAAACTCATTGGATGCGGATCGGCCACTCCATCGCTTAGCGTTTCAAATGATGACCTTTCTAAAATAGTTGAAACATCAGATGAATGGATCGCAGCACGGACTGGGATTCGGAATAGGCGAGTTCTTTCAGGAAATGAGACACTGCGCGAGCTTTCAGTACAGGCAGCAAAAAAAGCTCTTGAGATGGCTCAAGTAAATGCTGATGATGTTGACCTTGTTCTCCTTTGCACGTCTACCCCAGATGATCTGTTTGGAGGTGCTGCTCAGGTGCTGGCGGAGGTGGGATGCGCAAATGCATTTGGCTTTGATATCACTGCTGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGGCATCC-GGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGT-GGATTGG-ACAGACAGAGGTACATGCATCCTCTTTGGT-GAT-GCTGCTGGT-GCTGTTTTGGTTCA-GGCATG-CAGTGCTGAT-GAAGATGGCTTGCTAGGTTTTTGCGTTCAAAGTGAT-GGCAACGGACAAAAGCACTTAAATTGTGTCTCGTCGCATGTT-GAGTCTAT-CCTG-TCG-AAGACC-AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT-CATTCCGCG-CGGTAAACATTTG-CAACAA-CCAAACA-CCGTTCCGAGATTTCATGTAC-GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC-CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA-CAGCTTGGCTGTCA-GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA-TGCGTAGAAATATTTAAATCCGGGA-TTGAACTTAGCTGG-CCTTGAGGGAATATTAATATTGTAAAGTTA-CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA-GCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAATCATGAAAGAATG] [+] EMBL AK120067 [AGCTCGCCCCCCACCACCCCCTCGCGCGCGGCCCCCACCCACCCCACCCTCGCAGACATCACCGCCGCCCACCGTTCCCATCGCCGCCGCCGTCCTCTCCCCCGCCCGCGCCTATATCATCTTCTCCCCCCCACCCTCGCGTACAGCAACGCATGCCCCCCCTCCTCCCCTCCCCTCCCGCTCGCCGCCATTGACCGAGCGATCTGCTGCCTCGCTCGCGAACTCCTACCCCGCCCGAGCCCGAGCCCAGGCCGTGGCCGCCGCGAGATCTCCGGCTGCTTTTCAGGTATGGTCGCCGCCTCCGGCCTCGCGCCGCCGCGGCTGGCGGTCTCCTGCCCGCGTGCAGGCGGGGCGCGGCTGAGGCGGACACCACCGGGTTGGCTTCCTCCGATCCGCTCCCGTGGCGTTGGCGGGGCCCGCGGCCGCGCAGCTCCGGTGCTGCGCCTCCACCGTCGACGACGGCGTCGTCTCCGCCGCGGCGGCCCCCAAGCCCCGCCTCCCCAGGGTCGTCGGTATGGGTTCAAAACTCATTGGATGCGGATCGGCCACTCCATCGCTTAGCGTTTCAAATGATGACCTTTCTAAAATAGTTGAAACATCAGATGAATGGATCGCAGCACGGACTGGGATTCGGAATAGGCGAGTTCTTTCAGGAAATGAGACACTGCGCGAGCTTTCAGTACAGGCAGCAAAAAAAGCTCTTGAGATGGCTCAAGTAAATGCTGATGATGTTGACCTTGTTCTCCTTTGCACGTCTACCCCAGATGATCTGTTTGGAGGTGCTGCTCAGGTGCTGGCGGAGGTGGGATGCGCAAATGCATTTGGCTTTGATATCACTGCTGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGGCATCC GGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGT GGATTGG ACAGACAGAGGTACATGCATCCTCTTTGGT GAT GCTGCTGGT GCTGTTTTGGTTCA GGCATG CAGTGCTGAT GAAGATGGCTTGCTAGGTTTATGCGTTCAAAGTGAT GGCAACGGACAAAAGCACTTAAATTGTGTCTCGTCGCATGTT GAGTCTAT CCTG TCG AAGACC AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATGGATGTTT ] [+] EMBL AA751713 [ gGCGCAAATGCATTTGGCTTTGATATCACTGCTGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGGCATCCGGGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGTGGGATTGGNACAGACAGAGGTACATGCATCCTCTTTGGTGGATGGCTGCTGGTGGCTGTTTTGGTTCAGGGCATGTCAGTGCTGATGGAAGATGGCTTGCTAGGTTTTTGCGTTCAAAGTGATGGGCAACGGACAAAAGCACTTAAATTGGGTCTCGTCGCATGTTGGAGTCTATCCCTGATCGAAANNCCAAATGG ] [+] EMBL CF196810 [ CTAGGTTTTTGCGTTCAAAGTGAT GGCAACGGACAAAAGCACTTAAATTGTGTCTCGTCGCATGTT GAGTCTAT CCTG TCG AAGACC AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGNNNTCATGTAC GTGGCCNNNNNNTAAGTCTTnnnn ] [+] EMBL BE040300 [ C AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTACAGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCG TACA CAGCTTGGCTGTCA GTGTGG AACAAGTCTGGATTG CCTACTAGCTCTTTGTAGTT AAGCGA TGCGTA AAATATTT AATCCCGGA TTGAACCTATCTGG CCTTGAGGGAATATT ATATTGTAAAGTAC CTGGGCCTT TTACAAGGGTGCG CCTG AAATTTTAATTG ACT TGGgt ] [-] EMBL CB634848 [ TTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGTGGTCAGCGTTCT ] [-] EMBL CB622459 [ TGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAATCATGAATGAATG] [-] EMBL CB617791 [ CCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGGGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATGGATGTTTNTTGTAGGTCAATCTTTAAAGAAT ] [+] EMBL BI799751 [ TTGGT CTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAATCCATTCCGCGCCGGTAAACATTTGCCAACAACCCAAACACCCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTCGCGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACACCAGCTTGGCTGTCACGTGTGGTAACCAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGACTGCGTAGAAATATTTAAATCCGGGACTTGAACTTAGCTGGCCCTTGAGGGAATATTAATATTGTAAAGTTACCTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAACGCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAAaaaaaaaa ] [+] EMBL AA750082 [ CTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA C ] [+] EMBL AU058099 [ GCTTGGCTGTCA GTGTGGTAACAAGNCTGGATTGTACTACTAGCNCTTTGTAGTTCAANCGA TNCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA NTGGGCCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCANCGTTCTGGCACTGATAAAAAaaaaaaaaa ] [+] EMBL AA749662 [ CAAGCGA TGCGTAGAAATATTT AATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGNNCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATng ] consensusID : consensus_13454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 638 fasta sequence [TTTACCTGCTTCCAGAATTGATTGGTGGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCAGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAACATTCCGCGCGGTAAACATTTGCAACAACCAAACACCGTTCAAAAAAATCAGGTACGTGGCCTAGGTAAAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTCCGACATGGGGGAGAGGGTCAAGAGCTCCCCCTGGAGGAGGGGGGAGGGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCTCTCT] [-] EMBL CB634847 [TTTACCTGCTTCCAGAATTGATTGGTGGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCAGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAACATTCCGCGCGGTAAACATTTGCAACAACCAAACACCGTTCAAAAAAATCAGGTACGTGGCCTAGGTAAAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTCCGACATGGGGGAGAGGGTCAAGAGCTCCCCCTGGAGGAGGGGGGAGGGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCTCTCT] consensusID : consensus_13454#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence [GCTGCCGGGCCCTTCAAATGTCCCAAGTTAGCATTGTAGATGAGGCTGTTCGAGCTGGTCAAGCTGAAGGCAGCGATGTTATTGCAGCATCAGGTATTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAATCATCTCCGCCGCGGTAAACACTTTGCATACAACCAAACACCGCTTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCACTGTCCAGACATTGTTTTTTGGCGTTAAATCTCCGTCATTTTGGCTGGCACATGAAACAGTGGTGCGTCCTTATTCAATATAAAAAAA] [+] EMBL BI799901 [GCTGCCGGGCCCTTCAAATGTCCCAAGTTAGCATTGTAGATGAGGCTGTTCGAGCTGGTCAAGCTGAAGGCAGCGATGTTATTGCAGCATCAGGTATTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAATCATCTCCGCCGCGGTAAACACTTTGCATACAACCAAACACCGCTTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCACTGTCCAGACATTGTTTTTTGGCGTTAAATCTCCGTCATTTTGGCTGGCACATGAAACAGTGGTGCGTCCTTATTCAATATAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13454#0 AGCTCGCCCCCCACCACCCCCTCGCGCGCGGCCCCCACCCACCCCACCCTCGCAGACATC 60 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 ACCGCCGCCCACCGTTCCCATCGCCGCCGCCGTCCTCTCCCCCGCCCGCGCCTATATCAT 120 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CTTCTCCCCCCCACCCTCGCGTACAGCAACGCATGCCCCCCCTCCTCCCCTCCCCTCCCG 180 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CTCGCCGCCATTGACCGAGCGATCTGCTGCCTCGCTCGCGAACTCCTACCCCGCCCGAGC 240 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CCGAGCCCAGGCCGTGGCCGCCGCGAGATCTCCGGCTGCTTTTCAGGTATGGTCGCCGCC 300 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 TCCGGCCTCGCGCCGCCGCGGCTGGCGGTCTCCTGCCCGCGTGCAGGCGGGGCGCGGCTG 360 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 AGGCGGACACCACCGGGTTGGCTTCCTCCGATCCGCTCCCGTGGCGTTGGCGGGGCCCGC 420 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 GGCCGCGCAGCTCCGGTGCTGCGCCTCCACCGTCGACGACGGCGTCGTCTCCGCCGCGGC 480 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 GGCCCCCAAGCCCCGCCTCCCCAGGGTCGTCGGTATGGGTTCAAAACTCATTGGATGCGG 540 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 ATCGGCCACTCCATCGCTTAGCGTTTCAAATGATGACCTTTCTAAAATAGTTGAAACATC 600 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 AGATGAATGGATCGCAGCACGGACTGGGATTCGGAATAGGCGAGTTCTTTCAGGAAATGA 660 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 GACACTGCGCGAGCTTTCAGTACAGGCAGCAAAAAAAGCTCTTGAGATGGCTCAAGTAAA 720 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 TGCTGATGATGTTGACCTTGTTCTCCTTTGCACGTCTACCCCAGATGATCTGTTTGGAGG 780 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 TGCTGCTCAGGTGCTGGCGGAGGTGGGATGCGCAAATGCATTTGGCTTTGATATCACTGC 840 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 TGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGG 900 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CATCCGGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGTGGATTGGACAGA 960 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CAGAGGTACATGCATCCTCTTTGGTGATGCTGCTGGTGCTGTTTTGGTTCAGGCATGCAG 1020 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 TGCTGATGAAGATGGCTTGCTAGGTTTTTGCGTTCAAAGTGATGGCAACGGACAAAAGCA 1080 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CTTAAATTGTGTCTCGTCGCATGTTGAGTCTATCCTGTCGAAGACCAATGGTGTCCCTAG 1140 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCG 1200 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------------ consensus_13454#0 CTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACC 1260 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 ------------------------------------------------------TTTACC 6 consensus_13454#0 TGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGC 1320 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 TGCTTCCAGAATTGATTGGTGGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGC 66 consensus_13454#0 TGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAA 1380 consensus_13454#2 --------------------------------------------------GCTGCCGGGC 10 consensus_13454#1 TGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAA 126 * * * consensus_13454#0 CACCAGTGCGGCCTCAATTC-CATTAGCATTAGATGAGGCTGTTCGAGCTGG-CAAGGTG 1438 consensus_13454#2 CCTTCAAATGTCCCAAGTTAGCATTG----TAGATGAGGCTGTTCGAGCTGGTCAAGCTG 66 consensus_13454#1 CACCAGTGCGGCCTCAATTC-CATTAGCATTAGATGAGGCTGTTCGAGCTGG-CAAGGTG 184 * * ** * ** **** ********************** **** ** consensus_13454#0 AAGGCAGGCGATGTTATTGCAGCATCAGGT-TTTGGTGCTGGACTTACATGGGGTTCAGC 1497 consensus_13454#2 AAGGCAG-CGATGTTATTGCAGCATCAGGTATTTGGTGCTGGACTTACATGGGGTTCAGC 125 consensus_13454#1 AAGGCAGGCGATGTTATTGCAGCATCAGGT-TTTGGTGCAGGACTTACATGGGGTTCAGC 243 ******* ********************** ******** ******************** consensus_13454#0 TATTGTCAAATGGTGCTAATCAT-TCCGC-GCGGTAAACA-TTTGCA-ACAACCAAACAC 1553 consensus_13454#2 TATTGTCAAATGGTGCTAATCATCTCCGCCGCGGTAAACACTTTGCATACAACCAAACAC 185 consensus_13454#1 TATTGTCAAATGGTGCTAAACAT-TCCGC-GCGGTAAACA-TTTGCA-ACAACCAAACAC 299 ******************* *** ***** ********** ****** ************ consensus_13454#0 CG-TTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTT 1612 consensus_13454#2 CGCTTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTT 245 consensus_13454#1 CG-TTCAAAAAAATCAGGTACGTGGCCTAGGTAAAAGTCTTCCAGGGTCATTTGCCCTTT 358 ** *** * * *** *************** ************************** consensus_13454#0 CC-CTGTCC-GACATTGTTTTTTGG-GTTAAATCTCCGTCATTTTG-CTTGCACATGAAA 1668 consensus_13454#2 CCACTGTCCAGACATTGTTTTTTGGCGTTAAATCTCCGTCATTTTGGCTGGCACATGAAA 305 consensus_13454#1 CC-CTGTCC-GACATGGGGGAGAGGGTCAAGAGCTCC----CCCTG--GAGGAGGGGGGA 410 ** ****** ***** * ** * * **** ** * * * * consensus_13454#0 CAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACACAGCTTGGCTGTCAGTGT 1728 consensus_13454#2 CAGTGGTGCGTCCTTATTCA-ATATAAAAAAA---------------------------- 336 consensus_13454#1 GGGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 470 * * * ** * * * * consensus_13454#0 GGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGATGCGTAGAAATATT 1788 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 530 consensus_13454#0 TAAATCCGGGATTGAACTTAGCTGGCCTTGAGGGAATATTAATATTGTAAAGTTACTGGG 1848 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 TCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 590 consensus_13454#0 CCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCAC 1908 consensus_13454#2 ------------------------------------------------------------ consensus_13454#1 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCTCTCT------------ 638 consensus_13454#0 TGATAATAAGCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAATCATGAAAGAATG 1967 consensus_13454#2 ----------------------------------------------------------- consensus_13454#1 ----------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||