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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13467#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 765 fasta sequence
[TTCTACTTACTCACCACCAGCAAATGCGCATGCAT-AATGTCGCTGGCCGGGCGACCGTG-CGCCA-CAAATCAGCCATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC-AGCCGATATTGCGGATAAACATAGTGA-T-CACA-GGCGTAAACGTCG-CCGTTGTGCTCAACAAT-CACCGAGCGCCC-ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC-TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC-TCACCCTGAATATCACCAGGC-GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC-AGCCAGGCGCTCGACCACCGGAAT-AAACTGGATGAA-TTCGACTCCC-GCATCGCACAAAAAATCATATACCTGCAACGGGTGCTGCGCGCTGGTGCGATTAACGCAGACCAGCANGTTATAGTCGACTCGAGGGGGGGCCGGTANCC]
[-] EMBL AU175125 [TTCTACTTACTCACCACCAGCAAATGCGCATGCAT AATGTCGCTGGCCGGGCGACCGTG CGCCA CAAATCAGCCATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ANAGGTTGGCTGATGATGG ]
[+] EMBL AU069938 [ CTACTTACTCACCACCAGCAAATGCGCAT CAT AATGTCGCTGGCCGGGCGACCGTG CGCCA CAAATCAGCNATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCG ]
[+] EMBL AU069950 [ TACTTACTCACCACCAGCAAATGCGCATGCATAAATGTCGCTGGCCGGGCGACCGTGCCGCCAGCAAATCAGCCATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGCGGCATGTNACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCCGGCATCGCACAAAAAATCATATACCTGCAACGGGTGCTGCGCGCTGGTGCGATTTACGGCGACCAGCANGTTATAGTCGACTCGAGGGGGGGCCGGTANCC]
[-] EMBL AU175118 [ TTACTCACCACCAGCAAATGCGCATGCAT AATGTCGCTGGCCGGGCGACCGTG CGCCAGCAAATCAGCCATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATCAAGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTTCC GCATCGNACAAAAAATCATATACCTGCAACG ]
[-] EMBL AU077621 [ TTACTCACCACCAGCAAATGCGCATGCAT AATGTCGCTGGCCGGGCGACCGTG CGCCAGCAAATCAGCCATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGA ]
[+] EMBL AU069940 [ TACTCACCACCAGCAAATGCGCATGCAT AATGTCGCTGGCCGGGCGACCGTG CGCCA CAAATCAGCCATTGCTTTAAGATATGGCGGTAGATGGCGGAAATAACGCTGATACCCGGCACACAAATAATTCAGTCCCGGTTTGCCGCTGGCATCGAGCATGAAGCGGTGTTTCGGGCAGCCTCCCCAGCACGCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACAGGGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAACTTCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGCTTCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAATAAAACTGGATGAATTTCGACTCCCGGCATGGGACAAAAAATCATATACCTGCAA GGGTGCTGCGCGCTGGTGGGATTAANGGAGACCA ]
[-] EMBL AU175117 [ GCTTTTAACACGTTACAACTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAACGGTTGCTGCGCGCTGGTGCGATTAACGCAGACCAG ]
[-] EMBL AU077620 [ TTTTAACACG TACAATTGCGACACTGCGCCGGTAACTGCTTAAATTTATCTTCACCAAACGCCTGCTGTTGCGGGGAATCGATCATTTCTGCAATTGTTTGCTGGTGCATATTCCCC AGCCGATATTGCGGATAAACATAGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAACGGTTGCTGCGCGCTGGTGCGATTAACGCAGACCAG ]
[-] EMBL OSS4605A [ ntTTTCGGGAAATC NTCATTCCTGCAATTGTTT CTGGTGCATA TCCCC AACCGATATTGCGGATAAACATAGTGA T TACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGANAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAAC GGTTNTGCGCGCTGGTGCGATTAACGCAGACCAG ]
[-] EMBL AU175124 [ tTATTCCCCAAGCCGATATTGCGGATAAACATAGTGATT CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATT GCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGANCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAACGGTTG TGCG GCTGGTGCGATTA ]
[-] EMBL AU069927 [ ATATTGCGGATAAACATAGTGA TCCACA GGCGTAAACGTCGCCCGTTGTGCTCAACAATCCACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAAC GGTTNTGCGCGCTGGTGCGATTAACGCAGACCAG ]
[-] EMBL AU069735 [ GGATAAACATAGTGA T CANA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCCAACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAAC GGTTNTGCGCGCTGGTGCGATTA ]
[-] EMBL AU069771 [ AGTGA T CACA GGCGTAAACGTCG CCGTTGTGCTCAACAAT CACCGAGCGCCC ACAGGTTGGCTGATGATGGCAAACCGCACCCGGCGCACCGACAAAATTGGCAAACGCCCATTCGATATTCATCACGAAAATCTTGCCGACGTCGCGTTTGATCCAGTGGTCGAATATCGCCACCAGAAAC TCACCGAACTCCTCGGGGCGCACCGACCATTCCGTTAGC TCACCCTGAATATCACCAGGC GCATGTAACTTAAGTCCATCGCGGGCAGTTGTTTCATC AGCCAGGCGCTCGACCACCGGAAT AAACTGGATGAA TTCGACTCCC GCATCGCACAAAAAATCATATACCTGCAAC GGTTNTGCGCGCTGGTGCGATTAACGCAGACCAG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||