These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13470#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2555 fasta sequence [CGCGTTTCCATCCCCATCTCCATCTCCTCCTCCTCGCCGCATTCGCATCTCCCTCCTCTCGCCGCCGCCGCCACCGCCACCGCCGCCGCTCCCTTCCTGCCATTACCGCCCGTGCCCCTCACCCCCCTTTGCCCCTCGATCTCTCCCCCCTAGGGTAGGGTAGGGGCTTGCCTCCGATTCCGTACGGACACACCCTACCTAGGGTAGGGTAGGGGTAGGGGTAGGGTTGATAGAGAGAGGTTCCGGGATGACGGCCGGCGAGGGCTGCGCGGCCCGACGCGGGTGATCCGCTCTCACGCGGGGAGCACCTCTCGCGCGCGCTTGCTTCACGTGGGGGATCCCGTCGCGGCTATCCCTCCTCTCCTCTCTTCTTCCCCCTTCTAGTCTAGTTTAGGGTTTTCTATCTATCCATCTAGATTTTGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCACGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCACGCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTGGACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATGCAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGATGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGGAAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCATCACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAATGTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG-CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC-TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAAAAAAAAAGAAGAGAAACTATTGGATATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAACCCTGTACCACCCTGATTTTTATGTCTAAACCGCAGCTTACTCAAAAAAAAAAGGA] [+] EMBL AK111501 [CGCGTTTCCATCCCCATCTCCATCTCCTCCTCCTCGCCGCATTCGCATCTCCCTCCTCTCGCCGCCGCCGCCACCGCCACCGCCGCCGCTCCCTTCCTGCCATTACCGCCCGTGCCCCTCACCCCCCTTTGCCCCTCGATCTCTCCCCCCTAGGGTAGGGTAGGGGCTTGCCTCCGATTCCGTACGGACACACCCTACCTAGGGTAGGGTAGGGGTAGGGGTAGGGTTGATAGAGAGAGGTTCCGGGATGACGGCCGGCGAGGGCTGCGCGGCCCGACGCGGGTGATCCGCTCTCACGCGGGGAGCACCTCTCGCGCGCGCTTGCTTCACGTGGGGGATCCCGTCGCGGCTATCCCTCCTCTCCTCTCTTCTTCCCCCTTCTAGTCTAGTTTAGGGTTTTCTATCTATCCATCTAGATTTTGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCACGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCACGCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTGGACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATGCAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGATGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGGAAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCATCACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAATGTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAATCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAA ] [+] EMBL AK102647 [ ATCTAGATTTTGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCACGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCACGCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTGGACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATGCAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGATGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGGAAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCATCACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAATGTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTCTTTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACTGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAAA ] [+] EMBL CF302989 [ aggGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCC ] [+] EMBL CF325983 [ AAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGNGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCC ] [+] EMBL AU225355 [ gccgcTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACT ] [+] EMBL CA759437 [ TGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATG ] [+] EMBL CA757096 [ TGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATG ] [-] EMBL CB629262 [ GACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAGAAAAAAAAGAAGAGAAACTATTGGATATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAACCCTGTACCACCCTGATTTTTATGTCTAAACCGCAGCTTACTCA ] [-] EMBL CB629264 [ GCAAATTCGCCCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCCCTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGCCATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAGAAAAAAAAGAAGAGAAACTATTGGATATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAA CCTGTACCA CGGGATTTTTATGTCTAATCCGCAGCTTACTCAAAAAAAAAAGGA] [+] EMBL CB664119 [ GATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTG ] [+] EMBL BM420510 [ ACAGGTTTCTTTTCCCGATAATGCCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACC AAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCCAGAAGGATGAATTC ATGTGTTGTTTTTGCTCAACCACCGTTTTTTTGGC GGCAGTGTT CAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAA ] [+] EMBL BM420113 [ CCTTCGTTACC AAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCCACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAA ] consensusID : consensus_13470#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence [TTTTTTTTTTTTTTAAAAAATCTGAAGCAGTGTAATATCATTCTTTGACAGTATTTAGTTATTGACCTAGAAGCTTATTTCACATGAATTATAAAGACGACTGGTTCATTAATGGAATGTGGGAGTCTATGCATTTGAACAATGTACCTGCTTCGTAATCCCGATTCTGCTGTATCACTTAGTAACCATGCATCTCAGGGAACTTTGTTTGGGTGACCACAAGAAGTTCAGCCAAGATAGTGATCATGTTGAACTGTTTTTCCCTTAATTGGAAGTGTTCAGTTAGTAAAACCTCCAAAAATTTGAAATCGTATCTTTTGGAAGGGGGACTCTAGAAAATAGAAATAAATATGCTAGTAGTAGCGACTGCATCATGATACTTTATTTTTATGCTGTTTGAATTGTTTCTGCTTCCAGGTAAAGGATTATTAATCCTGACCATGTGATTTGTTACTTGAAACAATTTGTGAGCATATTCCAACAGAGTAGCATTTAATATCTTGTTTATATTGCAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGTGAGTTGTCCACTG] [+] EMBL CA759438 [TTTTTTTTTTTTTTAAAAAATCTGAAGCAGTGTAATATCATTCTTTGACAGTATTTAGTTATTGACCTAGAAGCTTATTTCACATGAATTATAAAGACGACTGGTTCATTAATGGAATGTGGGAGTCTATGCATTTGAACAATGTACCTGCTTCGTAATCCCGATTCTGCTGTATCACTTAGTAACCATGCATCTCAGGGAACTTTGTTTGGGTGACCACAAGAAGTTCAGCCAAGATAGTGATCATGTTGAACTGTTTTTCCCTTAATTGGAAGTGTTCAGTTAGTAAAACCTCCAAAAATTTGAAATCGTATCTTTTGGAAGGGGGACTCTAGAAAATAGAAATAAATATGCTAGTAGTAGCGACTGCATCATGATACTTTATTTTTATGCTGTTTGAATTGTTTCTGCTTCCAGGTAAAGGATTATTAATCCTGACCATGTGATTTGTTACTTGAAACAATTTGTGAGCATATTCCAACAGAGTAGCATTTAATATCTTGTTTATATTGCAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGTGAGTTGTCCACTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13470#0 CGCGTTTCCATCCCCATCTCCATCTCCTCCTCCTCGCCGCATTCGCATCTCCCTCCTCTC 60 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GCCGCCGCCGCCACCGCCACCGCCGCCGCTCCCTTCCTGCCATTACCGCCCGTGCCCCTC 120 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 ACCCCCCTTTGCCCCTCGATCTCTCCCCCCTAGGGTAGGGTAGGGGCTTGCCTCCGATTC 180 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 CGTACGGACACACCCTACCTAGGGTAGGGTAGGGGTAGGGGTAGGGTTGATAGAGAGAGG 240 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TTCCGGGATGACGGCCGGCGAGGGCTGCGCGGCCCGACGCGGGTGATCCGCTCTCACGCG 300 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GGGAGCACCTCTCGCGCGCGCTTGCTTCACGTGGGGGATCCCGTCGCGGCTATCCCTCCT 360 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 CTCCTCTCTTCTTCCCCCTTCTAGTCTAGTTTAGGGTTTTCTATCTATCCATCTAGATTT 420 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCA 480 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 CGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCAC 540 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTG 600 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATG 660 consensus_13470#1 --------------TTTTTTTTTTTTTTAAAAAATCTGAAGCAGTGT--AATATCATTCT 44 * * * * ** ** * * * ** * * *** consensus_13470#0 CAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGA 720 consensus_13470#1 TTGACAGTATTTAGTTATTGACC--TAGAAGCTTATTTCACATGAATTATA-----AAGA 97 * ** * *** * * ** *** ** * *** ** * ** consensus_13470#0 TGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAG 780 consensus_13470#1 CGACTGGTTCATTAATGGAATGTGGGAGTCTA-TGCATTTGA-ACAATGTACCTGCTTCG 155 ** ** ** ** * ** * * ** ** * ** * * * ** * * consensus_13470#0 GGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACAT 840 consensus_13470#1 TAATCCCGATT---CTGCTGTATCACTTAGTAACCATGCATCTCAGGGAACTTTG--TTT 210 * ** * * * * ** * ** ** * * ** * consensus_13470#0 GGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGA 900 consensus_13470#1 GGGTGACCACAAGAAGTTCAGCCAAGATAGTGATCAT--GTTGAACTGTTTTTCCCTTAA 268 ** ** **** * *** ** ** * * ** * * ** * * consensus_13470#0 AGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTT 960 consensus_13470#1 ------TTGGAAGTGTTCAG------TTAGTAAAACCTCCAAAAATTTGAAATCGTATCT 316 * ** ***** ** * * *** * * * ** ** * consensus_13470#0 TCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAA-GGTCATTGCTCTAG 1019 consensus_13470#1 TTTGGAAGGG-GGACTCTAGAAAATAGAAATAAATATGCTAGTAGTAGCGACTGCATC-- 373 * ** * ** *** * ** * * ** ** * * * * *** consensus_13470#0 ACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTC-TTCATGAACAGGGAATTCCTGTG 1078 consensus_13470#1 ATGATACTTTATTTTTATGCTGTTTGAATTGTTTCTGCTTCCAGGTAAAGGATTATTA-A 432 * * ** *** * * * * * * * * * *** * consensus_13470#0 GCACCTCTATGGGATTCATT-CAGGGGCCAGTTTGTTGGCCT-TTTGAGCCCACTGGATT 1136 consensus_13470#1 TCCTGACCATGTGATTTGTTACTTGAAACAATTTGTGAGCATATTCCAACAGAGTAGCAT 492 * * *** **** ** * * ** ***** ** * ** * * * * * * consensus_13470#0 TTATACTCATATTGAGAG---AGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGC 1193 consensus_13470#1 TTAATATCTTGTTTATATTGCAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGC 552 *** ** * ** * * *************************************** consensus_13470#0 TTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACG 1253 consensus_13470#1 TTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACG 612 ************************************************************ consensus_13470#0 AGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGG 1313 consensus_13470#1 AGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGTGAGTTGTCCACTG---------- 662 ************************************ * * consensus_13470#0 AAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCAT 1373 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 CACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAAT 1433 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTAT 1493 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGG 1553 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 CTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTG 1613 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTG 1673 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 ACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCA 1733 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCGCCCTTTGGATTCTTTAACGGGC 1793 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 AAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTA 1853 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 ATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAA 1913 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTG 1973 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAAC 2033 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 ATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAG 2093 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TCTGTAAAGTCTTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTA 2153 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCT 2213 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGA 2273 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 AGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTG 2333 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 TTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTAC 2393 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 AGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAAAAAAAAAGAAGAGAAACTATTGGAT 2453 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 ATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAACCCTGTACCACCCT 2513 consensus_13470#1 ------------------------------------------------------------ consensus_13470#0 GATTTTTATGTCTAAACCGCAGCTTACTCAAAAAAAAAAGGA 2555 consensus_13470#1 ------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||