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Oryza sativa
cluster # 13478 cluster # 13478       Sequences # 13       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13478#0 length = 1837 sequences # 3  
consensus_13478#1 length = 1804 sequences # 7  
 consensus_13478#2 length = 598 sequences # 1  
consensus_13478#3 length = 297 sequences # 1  
consensus_13478#4 length = 232 sequences # 1  
consensusID : consensus_13478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1837
fasta sequence 
                              [TTGGACGGAGAGGGCCACCGGAGACAGGAAGGCAGAAAGAAAAAATGGCGATAGGATGGCATAGGTCACAGAGCCTGGCGTCTGCAGGGCTCGGGCTGCACGTCCTCCTCTGCTCGTCGTTGCTGCTCAACGCCGTCTTCATCGCGCACCAATTCCTCGGGGCCTCACCGCCGGCAACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCACTGCAGGCGGCCAAGGAGGCCGAGGACGTGGCCGCCGTCGACTGCTCCGGCCACGGGAGCGTGTTCCTGGATGGCGTCACCGGCGAGGACGGGCGGCCCGGGTGCGAGTGCAACAGCTGCTTCTCCGGTCCGGACTGCTCCGTCCGAATCCCCAACTGCGCCGCCGACGGTCAAGGCGGGGACCCGTTGTTCCTGGAGCCGTATTGGAAGCGCCACGCCGCGGCCAGCGCCGTGGTGTTCTCCGGGTGGCATCGCTTGAGCTACATCACCACCGATGGCCACTTAAAGTCCGTTGAGCTCGATCGCCAGATCCGGCGGCTCCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGACCGGCTCCACCCACCTGATCAACGCGCTGGTGTACGCGCTCTCCCCGGAAGGCAACGCCGCCTCGCCGCCGGCCAGCGTCGTCGCCACCGTGCCGTATTTCGCGATGTACAAGTCACAGACCGTCATGTTCGACGGCCGGGAGTACAGATGGGACGGGACAACCGCTGCGTGGGCAAACAACAACAGCTCACGGAACCCCACCAGGGGTTTCATTGAGTTCGTCACCTCGCCGAACAACCCCGACAGCACGTTGCACGAGCCCATCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCACGTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATGCCACCGCAGTACTGCACTTACTTCAACCGGATCAAAGAACCA-TCGCCAGCCTACGCTTGGGTG-AAATGCGAGTGGGTGGAAGACGACGACTGCTACGAGACGCTG-CTGGCGGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCGGCACTCGGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGGAGAGGATCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGCTCCATGTGAAAATCGTGAATTGGGACCGGGACAAAAGCTTTCGTCTAGCTGGCTTCGATGGCCACTGTGCCGGAACGATCAGCTGCTAGCTGATTGTAGGCAATAAATACAAGGCAACGTGGAAAATC-AAGACTGGAATGATCAGCTACGCGTTAATCGTTCATTCGTTCGCTGTCGACCTTTCGACGGACAGGTGTAATTATGTGGATCTACACAATCAATTAGGTGGACACTATGTGATTATGTTT-CACGTGACTAATAATTGAGTATGTAAATAAATGAAGATCATACATGTTACTGATTCAAAACTCGTCATTCTTGGAATCAAAGGGCCAAAAAAAAAA]

[+] EMBL AK072165             [TTGGACGGAGAGGGCCACCGGAGACAGGAAGGCAGAAAGAAAAAATGGCGATAGGATGGCATAGGTCACAGAGCCTGGCGTCTGCAGGGCTCGGGCTGCACGTCCTCCTCTGCTCGTCGTTGCTGCTCAACGCCGTCTTCATCGCGCACCAATTCCTCGGGGCCTCACCGCCGGCAACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCACTGCAGGCGGCCAAGGAGGCCGAGGACGTGGCCGCCGTCGACTGCTCCGGCCACGGGAGCGTGTTCCTGGATGGCGTCACCGGCGAGGACGGGCGGCCCGGGTGCGAGTGCAACAGCTGCTTCTCCGGTCCGGACTGCTCCGTCCGAATCCCCAACTGCGCCGCCGACGGTCAAGGCGGGGACCCGTTGTTCCTGGAGCCGTATTGGAAGCGCCACGCCGCGGCCAGCGCCGTGGTGTTCTCCGGGTGGCATCGCTTGAGCTACATCACCACCGATGGCCACTTAAAGTCCGTTGAGCTCGATCGCCAGATCCGGCGGCTCCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGACCGGCTCCACCCACCTGATCAACGCGCTGGTGTACGCGCTCTCCCCGGAAGGCAACGCCGCCTCGCCGCCGGCCAGCGTCGTCGCCACCGTGCCGTATTTCGCGATGTACAAGTCACAGACCGTCATGTTCGACGGCCGGGAGTACAGATGGGACGGGACAACCGCTGCGTGGGCAAACAACAACAGCTCACGGAACCCCACCAGGGGTTTCATTGAGTTCGTCACCTCGCCGAACAACCCCGACAGCACGTTGCACGAGCCCATCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCACGTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATGCCACCGCAGTACTGCACTTACTTCAACCGGATCAAAGAACCA TCGCCAGCCTACGCTTGGGTG AAATGCGAGTGGGTGGAAGACGACGACTGCTACGAGACGCTG CTGGCGGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCGGCACTCGGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGGAGAGGATCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGCTCCATGTGAAAATCGTGAATTGGGACCGGGACAAAAGCTTTCGTCTAGCTGGCTTCGATGGCCACTGTGCCGGAACGATCAGCTGCTAGCTGATTGTAGGCAATAAATACAAGGCAACGTGGAAAATC AAGACTGGAATGATCAGCTACGCGTTAATCGTTCATTCGTTCGCTGTCGACCTTTCGACGGACAGGTGTAATTATGTGGATCTACACAATCAATTAGGTGGACACTATGTGATTATGTTTGCA GTGACTAATAATTGAGTATGTAAATAAATGAAGATCATACATG                                                  ]
[+] EMBL BM039049             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATCAAAGAACCATTCGCCACGCTACCCTTGGTTGTAAATGCGAGT GGTGGAAGACGACGACTGCTACGAGACGCTGTCTGGCAGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCGGCACTCGGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGGAGAGGATCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGCTCCATGTGAAAATCGTGAATTGGGACCGGGACNAAAGCTTTCGTCTAGCTGGCTTCGATGGCCACTGTGCCGGAACGATCAGCTGCTAGCTGATTGTAGGCAATAAATACAAGGC ACGTGGAAAATCNCAGACTGGAATGATCAGCTACGCGTTAATCGTTCATTCGTTCGCTGTCGACCTTTCGACGGACAGGTGTAATTATGTGGATCTATACAATCAATTAGGTGGACACTATGTGATTATGTTT CACGTGACTAATAATTGAGTATGTAAATAAATGAAGATCATACATGTTACTGATTCAAAA                                    ]
[+] EMBL BI805009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GACATGCTCCTGGAGAGGATCACCGAATTTGTCGATCCCGAGAAGCAC GCAGAGCTCCCGCTGCCTCCAGCTCCATGTGAAAATCGTGAATTGGGACCGGGACCAAAGCTTTCGTCTAGCTGGCTTCGATGGCCCCTGTGCCGGAACGATCAGCTGCTAGCTGATTGTAGCCAATAAATACAAGGCAACGTGGAAAATC AAGACTGGAATGATCAGCTACGCGTTAATCGTTCATTCGTTCGCTGTCGACCTTTCGACGGACAGGTGTAATTATGTGGATCTACACCATCAATTAGGTGGACCCTATGTGATTATGTTT CCAGTGACTAATAATTGAGTATGTAAATAAATGAAGATCATACATGTTACTGATTCAGCACTCGTCATTCTTGGAATCAAAGGGCCAAAAAAAAAA]




>consensus_13478#0
TTGGACGGAGAGGGCCACCGGAGACAGGAAGGCAGAAAGAAAAAATGGCGATAGGATGGC
ATAGGTCACAGAGCCTGGCGTCTGCAGGGCTCGGGCTGCACGTCCTCCTCTGCTCGTCGT
TGCTGCTCAACGCCGTCTTCATCGCGCACCAATTCCTCGGGGCCTCACCGCCGGCAACGC
CGGAGCGGCTCGGCGACGGGCTGAGCTGGGCACTGCAGGCGGCCAAGGAGGCCGAGGACG
TGGCCGCCGTCGACTGCTCCGGCCACGGGAGCGTGTTCCTGGATGGCGTCACCGGCGAGG
ACGGGCGGCCCGGGTGCGAGTGCAACAGCTGCTTCTCCGGTCCGGACTGCTCCGTCCGAA
TCCCCAACTGCGCCGCCGACGGTCAAGGCGGGGACCCGTTGTTCCTGGAGCCGTATTGGA
AGCGCCACGCCGCGGCCAGCGCCGTGGTGTTCTCCGGGTGGCATCGCTTGAGCTACATCA
CCACCGATGGCCACTTAAAGTCCGTTGAGCTCGATCGCCAGATCCGGCGGCTCCACAGGG
CCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGACCGGCTCCACCCACC
TGATCAACGCGCTGGTGTACGCGCTCTCCCCGGAAGGCAACGCCGCCTCGCCGCCGGCCA
GCGTCGTCGCCACCGTGCCGTATTTCGCGATGTACAAGTCACAGACCGTCATGTTCGACG
GCCGGGAGTACAGATGGGACGGGACAACCGCTGCGTGGGCAAACAACAACAGCTCACGGA
ACCCCACCAGGGGTTTCATTGAGTTCGTCACCTCGCCGAACAACCCCGACAGCACGTTGC
ACGAGCCCATCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCACC
TGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCACGTCCAAGCTCT
CCGGCCACGCCGGCAGCAGATTCGGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCA
GGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGG
TGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCT
TCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCA
CCCGGATCTCGCTGCAGAAGATGCCACCGCAGTACTGCACTTACTTCAACCGGATCAAAG
AACCATCGCCAGCCTACGCTTGGGTGAAATGCGAGTGGGTGGAAGACGACGACTGCTACG
AGACGCTGCTGGCGGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCGGCACTC
GGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGGAGAGGA
TCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGCTCCATGT
GAAAATCGTGAATTGGGACCGGGACAAAAGCTTTCGTCTAGCTGGCTTCGATGGCCACTG
TGCCGGAACGATCAGCTGCTAGCTGATTGTAGGCAATAAATACAAGGCAACGTGGAAAAT
CAAGACTGGAATGATCAGCTACGCGTTAATCGTTCATTCGTTCGCTGTCGACCTTTCGAC
GGACAGGTGTAATTATGTGGATCTACACAATCAATTAGGTGGACACTATGTGATTATGTT
TCACGTGACTAATAATTGAGTATGTAAATAAATGAAGATCATACATGTTACTGATTCAAA
ACTCGTCATTCTTGGAATCAAAGGGCCAAAAAAAAAA

consensusID : consensus_13478#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1804
fasta sequence 
                              [CCAGTGGCCGACGGTGAGGTCATTGGAGACACCCCGAGACAGGAAAGCAATGGAGACGGGACGACATAGGTCACAGAGCCTGGGATCTGCAGGGCTCGCGTTCCACGCACTCCTCTGCTCGTCGTTGCTGCTCAACGCCGTCTTCTTCGCGCACCACCTCCTCAGGTCCTCGCCGACGGCAACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCGCTGCAGGCGGCCAGGGAGGCCGAGGCCGTGGCCGCCGCCGACTGCTCCGGCCACGGCAACGTGTTCCTGGATGGCGTCACCGGCGAGGATGGGCGGCCCGGGTGCGAGTGCAACCGCTGCTTCTCCGGGCCGGACTGCTCCGTCCGGACGCCCAACTGCACCGCCGACGCCGACAGCGGGAACCCGTTGTTCCTGGAGCCGTACTGGAGACGGCACGCGGCAGCCAGCGCCGTGGTGTTCTCCGGGTGGCACCGCTTGAGCTACATCACCACCGGCGGCCGCTTCCATTCCGTCGAGCTCGATCGCCACATCCGGCTGCTGCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCATGCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGA-CGGCAACGCCGACTCGCCGCCGGCAAGCGTCGTCGCCACCGTGCCGTA-TTACCCGGCGTACAAGTCACAAACCGACATGTTTGACGGCCGGGAGTACAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCGAAACTCCACCAAAGGCTTCATCGAGTTCGTCAC-CTCGCCG--AACAACCCCGACA-CCGCGTTGCGCAAGCCC-GTCCT--CGCCGGCTCGTCGGCGATCGTCGACCACGCGT-ACTACTGG---CCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCGCTTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGATGGGCGCTGATAAGGGACGAGAAGGTGGCGAAAAGAGCACTTTCGTACGTAGAGCAGAGCATCATGGGCGCGTCCCGGGACACCCAGCTCCGGATGCTGAAGATCCTAAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTATGACGTGATGAGGAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATACCGCCCCAGTACTGCACTTACTTCAACCGGATCAAAGAGCCATCGCCAGCCTACGCGTGGGTGAAATGCGAGTGGGAGGAAGACGTCGACTGCTACGAGACGCTGCTGGCGGCGGGGATCATCTCGCGGTCCGGCACTTTATCCGAGGCCGAAGCTCGGTACACGCGGATGAGCCTCCTCAAGGCGCAGGACGACTTCGACGTGCTCCTGGAGAGGATCACCGAATTCGTCGATGCCGAGGAGCACGGCAGAGCTCCCGGTGGCTCCAGCTCCATGTGAGAAATCGTGAATTGAGAGGGTGCCAAGCTTCGTCTAGCTGGCTTCGATGGGCGCTGTGCCGGAACGATCAGCTCTACTATCTGATTGTTCTTGGGTAAGTTCATGGGTACAATAATCAAGGGGAATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGACGAACAGGTAGATATTGATTTGTGTGTATTGACGAATGATGTAGATATACACAAGCAATTATGTGTTTCAGTGATCAACAATTGAATATGTAATTAAATGAATATCATACATGTTACATTTACTACTTAAGGCAG]

[+] EMBL AK064938             [CCAGTGGCCGACGGTGAGGTCATTGGAGACACCCCGAGACAGGAAAGCAATGGAGACGGGACGACATAGGTCACAGAGCCTGGGATCTGCAGGGCTCGCGTTCCACGCACTCCTCTGCTCGTCGTTGCTGCTCAACGCCGTCTTCTTCGCGCACCACCTCCTCAGGTCCTCGCCGACGGCAACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCGCTGCAGGCGGCCAGGGAGGCCGAGGCCGTGGCCGCCGCCGACTGCTCCGGCCACGGCAACGTGTTCCTGGATGGCGTCACCGGCGAGGATGGGCGGCCCGGGTGCGAGTGCAACCGCTGCTTCTCCGGGCCGGACTGCTCCGTCCGGACGCCCAACTGCACCGCCGACGCCGACAGCGGGAACCCGTTGTTCCTGGAGCCGTACTGGAGACGGCACGCGGCAGCCAGCGCCGTGGTGTTCTCCGGGTGGCACCGCTTGAGCTACATCACCACCGGCGGCCGCTTCCATTCCGTCGAGCTCGATCGCCACATCCGGCTGCTGCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCATGCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGA CGGCAACGCCGACTCGCCGCCGGCAAGCGTCGTCGCCACCGTGCCGTA TTACCCGGCGTACAAGTCACAAACCGACATGTTTGACGGCCGGGAGTACAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCGAAACTCCACCAAAGGCTTCATCGAGTTCGTCAC CTCGCCG  AACAACCCCGACA CCGCGTTGCGCAAGCCC GTCCT  CGCCGGCTCGTCGGCGATCGTCGACCACGCGT ACTACTGG   CCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCGCTTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGATGGGCGCTGATAAGGGACGAGAAGGTGGCGAAAAGAGCACTTTCGTACGTAGAGCAGAGCATCATGGGCGCGTCCCGGGACACCCAGCTCCGGATGCTGAAGATCCTAAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTATGACGTGATGAGGAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATACCGCCCCAGTACTGCACTTACTTCAACCGGATCAAAGAGCCATCGCCAGCCTACGCGTGGGTGAAATGCGAGTGGGAGGAAGACGTCGACTGCTACGAGACGCTGCTGGCGGCGGGGATCATCTCGCGGTCCGGCACTTTATCCGAGGCCGAAGCTCGGTACACGCGGATGAGCCTCCTCAAGGCGCAGGACGACTTCGACGTGCTCCTGGAGAGGATCACCGAATTCGTCGATGCCGAGGAGCACGGCAGAGCTCCCGGTGGCTCCAGCTCCATGTGAGAAATCGTGAATTGAGAGGGTGCCAAGCTTCGTCTAGCTGGCTTCGATGGGCGCTGTGCCGGAACGATCAGCTCTACTATCTGATTGTTCTTGGGTAAGTTCATGGGTACAATAATCAAGGGGAATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGACGAACAGGTAGATATTGATTTGTGTGTATTGACGAATGATGTAGATATACACAAGCAATTATGTGTTTCAGTGATCAACAATTGAATATGTAATTAAATGAATATCATACATGTTACATTTACTACTTAAG    ]
[+] EMBL CB656373             [                                                                                                                                                                                                                                                                                                             GAGGATGGGCGGCCCGGGTGCGAGTGCAACCGCTGCTTCTCCGGGCCGGACTGCTCCGTCCGGACGCCCAACTGCACCGCCGACGCCGACAGCGGGAACCCGTTGTTCCTGGAGCCGTACTGGAGACGGCACGCGGCAGCCAGCGCCGTGGTGTTCTCCGGGTGGCACCGCTTGAGCTACATCACCACCGGCGGCCGCTTCCATTCCGTCGAGCTCGATCGCCACATCCGGCTGCTGCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCATGCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGA CGGCAACGCCGACTCGCCGCCGGCAAGCGTCGTCGCCACCGTGCCGTA TTACCCGGCGTACAAGTCACAAACCGACATGTTTGACGGCCGGGAGTACAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCGAAACTCCACCAAAGGCTTCATCGAGTTCGTCAC CTCGCCG  AACAACCCCGACA CCGCGTTGCGCAAGCCC GTCCT  CGCCGGCTCGTCGGCGATCGTCGACCACGCGT ACTACTGG   CCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCGCTTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGATGGGCGCTGATAAGGGACGAGAAGGTGGCGAAAAGAGCACTTTCGTACGTAGAGCAGAGCATCATGGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB966367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cgttcaTCCG C AGCTCGATCG CACATCCGG TGCTGCACA GGCCGTCGG AACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCATGCAGCTCATCAACGCG TGGTGTACGCGCTCTCCCCCGA CGGCAACGCCGACTCGCCGCCGGCAAGCGTCGTCGCCACCGTGCCGTA TTACCCGGCGTACAAGTCACAAACCGACATGTTTGACGGCCGGGAGT CAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCGAAACTCCACCAAAGGCTTCATCGAGTTCGTCACNCTCGCCGNNAACAACCCCGACA CCGCGTTGCGCAAGCCCNGTCCTNNCGCCGGCTCATCGGCGATCGTCGACCACGCGTAACTACTGGGNNCCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCGCTTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGATGGGCGCTGATAAGGGACGAGAAGGTGGCGAAAAGAGCACTTTCGTACGTAGAGCAGAGCATCATGGGCGCGTCCCGGGACACCCAGCTCCGGATGCTGAAGATCCTAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB965721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGTCGAGCTCGATCGCCACATCCGGCTGCTGCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCCTGCAGCTCCTCAACGCGTTGGTGTCCGCGCTCTCCCCCGACCGGC ACGCCGCCTCGCCGCCGGCACGCGTCGTCGCCACCGTGCCGTACTTACCCGGCGTACACGTCCCAAACCGACATGTTTGCCGGCCGGGAGTACAGATGGGCCGGCACCCCCGCTACGTGGTCAAACAACGGCTCGCGAAACTCCACCAAAGGCTTCATCGCGTTCGTCCC CTCGCCG  AACAACCCCGACACCCGCGTTGCGCAAGGCC GT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU066073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGTCGAGCTCGATCGCCACATCCGGCTGCTGCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCATGCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGA CGGCAACGCCGACTCGCCGCCGGCAAGCGTCGTCGCCACCGTGCCGTA TTACCCGGCGTACAAGTCACAAACCGACATGTTTGACGGCCGGGAGTACAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCGAAACTCCACCAAAGGCTTCATCGAGTTCGTCAC CTCGCCG  AACAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU070527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTCGAGCTCGATCGCCACATCCGGCTGCTGCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCATGCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGA CGGCAACGCCGACTCGCCGCCGGCAAGCGTCGTCGCCACCGTGCCGTA TTACCCGGCGTACAAGTNACAAACCGACATGTTTGACGGCCGGGAGTACAGATGGGACGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB656374             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCATGGGCGCGTCCCGGGACACCCAGCTCCGGATGCTGAAGATCCTAAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTATGACGTGATGAGGAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATACCGCCCCAGTACTGCACTTACTTCAACCGGATCAAAGAGCCATCGCCAGCCTACGCGTGGGTGAAATGCGAGTGGGAGGAAGACGTCGACTGCTACGAGACGCTGCTGGCGGCGGGGATCATCTCGCGGTCCGGCACTTTATCCGAGGCCGAAGCTCGGTACACGCGGATGAGCCTCCTCAAGGCGCAGGACGACTTCGACGTGCTCCTGGAGAGGATCACCGAATTCGTCGATGCCGAGGAGCACGGCAGAGCTCCCGGTGGCTCCAGCTCCATGTGAGAAATCGTGAATTGAGAGGGTGCCAAGCTTCGTCTAGCTGGCTTCGATGGGCGCTGTGCCGGAACGATCAGCTCTACTATCTGATTGTTCTTGGGTAAGTTCATGGGTACAATAATCAAGGGGAATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGACGAACAGGTAGATATTGATTTGTGTGTATTGACGAATGATGTAGATATACACAAGCAATTATGTGTTTCAGTGATCAACAATTGAATATGTAATTAAATGAATATCATACATGTTACAGTTACTACTTAAGGCAG]




>consensus_13478#1
CCAGTGGCCGACGGTGAGGTCATTGGAGACACCCCGAGACAGGAAAGCAATGGAGACGGG
ACGACATAGGTCACAGAGCCTGGGATCTGCAGGGCTCGCGTTCCACGCACTCCTCTGCTC
GTCGTTGCTGCTCAACGCCGTCTTCTTCGCGCACCACCTCCTCAGGTCCTCGCCGACGGC
AACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCGCTGCAGGCGGCCAGGGAGGCCGA
GGCCGTGGCCGCCGCCGACTGCTCCGGCCACGGCAACGTGTTCCTGGATGGCGTCACCGG
CGAGGATGGGCGGCCCGGGTGCGAGTGCAACCGCTGCTTCTCCGGGCCGGACTGCTCCGT
CCGGACGCCCAACTGCACCGCCGACGCCGACAGCGGGAACCCGTTGTTCCTGGAGCCGTA
CTGGAGACGGCACGCGGCAGCCAGCGCCGTGGTGTTCTCCGGGTGGCACCGCTTGAGCTA
CATCACCACCGGCGGCCGCTTCCATTCCGTCGAGCTCGATCGCCACATCCGGCTGCTGCA
CAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCAT
GCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGACGGCAACGCCGACTCGCCGCC
GGCAAGCGTCGTCGCCACCGTGCCGTATTACCCGGCGTACAAGTCACAAACCGACATGTT
TGACGGCCGGGAGTACAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCG
AAACTCCACCAAAGGCTTCATCGAGTTCGTCACCTCGCCGAACAACCCCGACACCGCGTT
GCGCAAGCCCGTCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCA
CCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCGCTTCCAAGCT
CTCCGGCCACGCCGGCAGCAGATTCGGATGGGCGCTGATAAGGGACGAGAAGGTGGCGAA
AAGAGCACTTTCGTACGTAGAGCAGAGCATCATGGGCGCGTCCCGGGACACCCAGCTCCG
GATGCTGAAGATCCTAAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGC
CTTCGGCTATGACGTGATGAGGAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTC
CACCCGGATCTCGCTGCAGAAGATACCGCCCCAGTACTGCACTTACTTCAACCGGATCAA
AGAGCCATCGCCAGCCTACGCGTGGGTGAAATGCGAGTGGGAGGAAGACGTCGACTGCTA
CGAGACGCTGCTGGCGGCGGGGATCATCTCGCGGTCCGGCACTTTATCCGAGGCCGAAGC
TCGGTACACGCGGATGAGCCTCCTCAAGGCGCAGGACGACTTCGACGTGCTCCTGGAGAG
GATCACCGAATTCGTCGATGCCGAGGAGCACGGCAGAGCTCCCGGTGGCTCCAGCTCCAT
GTGAGAAATCGTGAATTGAGAGGGTGCCAAGCTTCGTCTAGCTGGCTTCGATGGGCGCTG
TGCCGGAACGATCAGCTCTACTATCTGATTGTTCTTGGGTAAGTTCATGGGTACAATAAT
CAAGGGGAATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGACGAACAGGTAG
ATATTGATTTGTGTGTATTGACGAATGATGTAGATATACACAAGCAATTATGTGTTTCAG
TGATCAACAATTGAATATGTAATTAAATGAATATCATACATGTTACATTTACTACTTAAG
GCAG

consensusID : consensus_13478#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence 
                              [CAGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATGCCACCCCAGTACTGCACTTACTTCAACCGGATCAAAGAACCATCGCCAGGTTAAAACGGCACATTATCTCTGCAGATCATGGCATTTCAATTTCTCTCGCTACCTCTCAATCGAATTCTTTAAGGTGATGCGATGGCGTGTCTGGTCTACCCTGATCTGCACTCTACCGCTTGGGTGAAATGCGAGTGGGTGGAAAACGACGACTGCTACCACACCCCGCTGGCAGCGGGGATCACTCCCTTACCGGCACTGTTAACGAGGCCCGCACCCGGTACACGCGGCTGACCCTCATCAGGACCCAGGACAATTCCAAATGCCTCGGAGAGGATCACCAATTGTTGATCCCAAAACCCCGGA]

[+] EMBL CA753203             [CAGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATGCCACCCCAGTACTGCACTTACTTCAACCGGATCAAAGAACCATCGCCAGGTTAAAACGGCACATTATCTCTGCAGATCATGGCATTTCAATTTCTCTCGCTACCTCTCAATCGAATTCTTTAAGGTGATGCGATGGCGTGTCTGGTCTACCCTGATCTGCACTCTACCGCTTGGGTGAAATGCGAGTGGGTGGAAAACGACGACTGCTACCACACCCCGCTGGCAGCGGGGATCACTCCCTTACCGGCACTGTTAACGAGGCCCGCACCCGGTACACGCGGCTGACCCTCATCAGGACCCAGGACAATTCCAAATGCCTCGGAGAGGATCACCAATTGTTGATCCCAAAACCCCGGA]




>consensus_13478#2
CAGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGA
GAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGAT
ACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAG
CCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGAT
GCCACCCCAGTACTGCACTTACTTCAACCGGATCAAAGAACCATCGCCAGGTTAAAACGG
CACATTATCTCTGCAGATCATGGCATTTCAATTTCTCTCGCTACCTCTCAATCGAATTCT
TTAAGGTGATGCGATGGCGTGTCTGGTCTACCCTGATCTGCACTCTACCGCTTGGGTGAA
ATGCGAGTGGGTGGAAAACGACGACTGCTACCACACCCCGCTGGCAGCGGGGATCACTCC
CTTACCGGCACTGTTAACGAGGCCCGCACCCGGTACACGCGGCTGACCCTCATCAGGACC
CAGGACAATTCCAAATGCCTCGGAGAGGATCACCAATTGTTGATCCCAAAACCCCGGA

consensusID : consensus_13478#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 297
fasta sequence 
                              [CCTCGATGGCCCCTGTCCCGGAACGATCAGCCCTACTATCTGATTGTTCTTGGGTAAGTTCNTGGGTACAATAATCNAGGGGAATGATCAGCTAGNCGTTGATTGTTCCCCNTCNATATTTGGNCGAACNGGTAGATATTGATTTGTGTGTATTGNCNAATGATGTAGATATACNCAANCAATTNTGTGTTTCAGTGATCNACAATTGAATNTGTNATTAAATGAATATCATACATGTTNCATTTNCTNCTTNAGGNNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL OSC6271              [CCTCGATGGCCCCTGTCCCGGAACGATCAGCCCTACTATCTGATTGTTCTTGGGTAAGTTCNTGGGTACAATAATCNAGGGGAATGATCAGCTAGNCGTTGATTGTTCCCCNTCNATATTTGGNCGAACNGGTAGATATTGATTTGTGTGTATTGNCNAATGATGTAGATATACNCAANCAATTNTGTGTTTCAGTGATCNACAATTGAATNTGTNATTAAATGAATATCATACATGTTNCATTTNCTNCTTNAGGNNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13478#3
CCTCGATGGCCCCTGTCCCGGAACGATCAGCCCTACTATCTGATTGTTCTTGGGTAAGTT
CNTGGGTACAATAATCNAGGGGAATGATCAGCTAGNCGTTGATTGTTCCCCNTCNATATT
TGGNCGAACNGGTAGATATTGATTTGTGTGTATTGNCNAATGATGTAGATATACNCAANC
AATTNTGTGTTTCAGTGATCNACAATTGAATNTGTNATTAAATGAATATCATACATGTTN
CATTTNCTNCTTNAGGNNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13478#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 232
fasta sequence 
                              [TTGGGTAAGTTCATGGGNCCAATAATCAAGGGGAATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGNCGAACAGGTAGATATTGATTTGTGNGTATTGACGAATGATGTAGATATACCCNAGCAATTNTGTGTTTCAGTGATCNNCNATTGAATATGTAATTAAATGAATNTCATACATGTTNCNTTTNCTCCTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU174578             [TTGGGTAAGTTCATGGGNCCAATAATCAAGGGGAATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGNCGAACAGGTAGATATTGATTTGTGNGTATTGACGAATGATGTAGATATACCCNAGCAATTNTGTGTTTCAGTGATCNNCNATTGAATATGTAATTAAATGAATNTCATACATGTTNCNTTTNCTCCTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13478#4
TTGGGTAAGTTCATGGGNCCAATAATCAAGGGGAATGATCAGCTAGACGTTGATTGTTCC
CCGTCAATATTTGGNCGAACAGGTAGATATTGATTTGTGNGTATTGACGAATGATGTAGA
TATACCCNAGCAATTNTGTGTTTCAGTGATCNNCNATTGAATATGTAATTAAATGAATNT
CATACATGTTNCNTTTNCTCCTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CCAGTGGCCGACGGTGAGGTCATTGGAGACACCCCGAGACAGGAAAGCAATGGAGACGGG 60
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ACGACATAGGTCACAGAGCCTGGGATCTGCAGGGCTCGCGTTCCACGCACTCCTCTGCTC 120
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GTCGTTGCTGCTCAACGCCGTCTTCTTCGCGCACCACCTCCTCAGGTCCTCGCCGACGGC 180
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      AACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCGCTGCAGGCGGCCAGGGAGGCCGA 240
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GGCCGTGGCCGCCGCCGACTGCTCCGGCCACGGCAACGTGTTCCTGGATGGCGTCACCGG 300
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CGAGGATGGGCGGCCCGGGTGCGAGTGCAACCGCTGCTTCTCCGGGCCGGACTGCTCCGT 360
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CCGGACGCCCAACTGCACCGCCGACGCCGACAGCGGGAACCCGTTGTTCCTGGAGCCGTA 420
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CTGGAGACGGCACGCGGCAGCCAGCGCCGTGGTGTTCTCCGGGTGGCACCGCTTGAGCTA 480
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CATCACCACCGGCGGCCGCTTCCATTCCGTCGAGCTCGATCGCCACATCCGGCTGCTGCA 540
consensus_13478#0      ------------------------------------------------------------
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGGCCGGCTCCAT 600
consensus_13478#0      -----TTGGACGGAGAGGGCCACCGGAGACAGGAAGGCAGAAAGAAAAAATGGCGATAGG 55
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GCAGCTCATCAACGCGTTGGTGTACGCGCTCTCCCCCGACGGCAACGCCGACTCGCCGCC 660
consensus_13478#0      ATGGCATAGGTCACAGAGCCTGGCGTCTGCAGGGCTCGGGCTGCACGTCCTCCTCTGCTC 115
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GGCAAGCGTCGTCGCCACCGTGCCGTATTACCCGGCGTACAAGTCACAAACCGACATGTT 720
consensus_13478#0      GTCGTTGCTGCTCAACGCCGTCTTCATCGCGCACCAATTCCTCGGGGCCTCACCGCCGGC 175
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      TGACGGCCGGGAGTACAGATGGGACGGCACCACCGCTACGTGGTCAAACAACGGCTCGCG 780
consensus_13478#0      AACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCACTGCAGGCGGCCAAGGAGGCCGA 235
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      AAACTCCACCAAAGGCTTCATCGAGTTCGTCACCTCGCCGAACAACCCCGACACCGCGTT 840
consensus_13478#0      GGACGTGGCCGCCGTCGACTGCTCCGGCCACGGGAGCGTGTTCCTGGATGGCGTCACCGG 295
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GCGCAAGCCCGTCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCA 900
consensus_13478#0      CGAGGACGGGCGGCCCGGGTGCGAGTGCAACAGCTGCTTCTCCGGTCCGGACTGCTCCGT 355
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCGCTTCCAAGCT 960
consensus_13478#0      CCGAATCCCCAACTGCGCCGCCGACGGTCAAGGCGGGGACCCGTTGTTCCTGGAGCCGTA 415
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CTCCGGCCACGCCGGCAGCAGATTCGGATGGGCGCTGATAAGGGACGAGAAGGTGGCGAA 1020
consensus_13478#0      TTGGAAGCGCCACGCCGCGGCCAGCGCCGTGGTGTTCTCCGGGTGGCATCGCTTGAGCTA 475
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      AAGAGCACTTTCGTACGTAGAGCAGAGCATCATGGGCGCGTCCCGGGACACCCAGCTCCG 1080
consensus_13478#0      CATCACCACCGATGGCCACTTAAAGTCCGTTGAGCTCGATCGCCAGATCCGGCGGCTCCA 535
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GATGCTGAAGATCCTAAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGC 1140
consensus_13478#0      CAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGACCGGCTCCAC 595
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CTTCGGCTATGACGTGATGAGGAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTC 1200
consensus_13478#0      CCACCTGATCAACGCGCTGGTGTACGCGCTCTCCCCGGAAGGCAACGCCGCCTCGCCGCC 655
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CACCCGGATCTCGCTGCAGAAGATACCGCCCCAGTACTGCACTTACTTCAACCGGATCAA 1260
consensus_13478#0      GGCCAGCGTCGTCGCCACCGTGCCGTATTTCGCGATGTACAAGTCACAGACCGTCATGTT 715
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      AGAGCCATCGCCAGCCTACGCGTGGGTGAAATGCGAGTGGGAGGAAGACGTCGACTGCTA 1320
consensus_13478#0      CGACGGCCGGGAGTACAGATGGGACGGGACAACCGCTGCGTGGGCAAACAACAACAGCTC 775
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      CGAGACGCTGCTGGCGGCGGGGATCATCTCGCGGTCCGGCACTTTATCCGAGGCCGAAGC 1380
consensus_13478#0      ACGGAACCCCACCAGGGGTTTCATTGAGTTCGTCACCTCGCCGAACAACCCCGACAGCAC 835
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      TCGGTACACGCGGATGAGCCTCCTCAAGGCGCAGGACGACTTCGACGTGCTCCTGGAGAG 1440
consensus_13478#0      GTTGCACGAGCCCATCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCC 895
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GATCACCGAATTCGTCGATGCCGAGGAGCACGGCAGAGCTCCCGGTGGCTCCAGCTCCAT 1500
consensus_13478#0      TCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCACGTCCAA 955
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ---------------------------------------------CCTCGATGGCCCCTG 15
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      GTGAGAAATCGTGAATTGAGAGGGTGCCAAGCTTCGTCTAGCTGGCTTCGATGGGCGCTG 1560
consensus_13478#0      GCTCTCCGGCCACGCCGGCAGCAGATTCGGGTGGGCGCTGGTAAGGGACGAGAAGGTCGC 1015
consensus_13478#2      ---------------------------CAGGTGGGCGCTGGTAAGGGACGAGAAGGTCGC 33
                                                                                   

consensus_13478#3      TCCCGGAACGATCAGCCCTACTATCTGATTGTTCTTGGGTAAGTTCNTGGGTACAATAAT 75
consensus_13478#4      ----------------------------------TTGGGTAAGTTCATGGGNCCAATAAT 26
consensus_13478#1      TGCCGGAACGATCAGCTCTACTATCTGATTGTTCTTGGGTAAGTTCATGGGTACAATAAT 1620
consensus_13478#0      GAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCT 1075
consensus_13478#2      GAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCT 93
                                                          **** * ** *  **   *     *

consensus_13478#3      CNAGGGG--AATGATCAGCTAGNCGTTGATTGTTCCCCNTCNATATTTGGNCGAACNGGT 133
consensus_13478#4      CAAGGGG--AATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGNCGAACAGGT 84
consensus_13478#1      CAAGGGG--AATGATCAGCTAGACGTTGATTGTTCCCCGTCAATATTTGGACGAACAGGT 1678
consensus_13478#0      CCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTT 1135
consensus_13478#2      CCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTT 153
                       *  ** *   * ****  * **  * *  * *    **  *       **  **     *

consensus_13478#3      AGATATTGATTTGTGTGTATTGN----CNAATGATGTAGATATACNCAANCAATTNTGTG 189
consensus_13478#4      AGATATTGATTTGTGNGTATTGA----CGAATGATGTAGATATACCCNAGCAATTNTGTG 140
consensus_13478#1      AGATATTGATTTGTGTGTATTGA----CGAATGATGTAGATATACACAAGCAATTATGTG 1734
consensus_13478#0      CGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCG 1195
consensus_13478#2      CGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCG 213
                        *   * *  *     **  **     *  ***  * **    *         *   * *

consensus_13478#3      TTTCAGTGATCNACAATTGAATNTGTNATTAAATGAATATCATACATGTTNCATTTNCTN 249
consensus_13478#4      TTTCAGTGATCNNCNATTGAATATGTAATTAAATGAATNTCATACATGTTNCNTTTNCTC 200
consensus_13478#1      TTTCAGTGATCAACAATTGAATATGTAATTAAATGAATATCATACATGTTACATTTACTA 1794
consensus_13478#0      GTCCACCCGGATCTCGCTGCAGAAGATGCCACCGCAGTACTGCACTTACTTCAACCGGAT 1255
consensus_13478#2      GTCCACCCGGATCTCGCTGCAGAAGATGCCACCCCAGTACTGCACTTACTTCAACCGGAT 273
                        * **            ** *   *     *    * *     ** *  * *        

consensus_13478#3      CTTNAGGNNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------ 297
consensus_13478#4      CTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 232
consensus_13478#1      CTTAAGGCAG-------------------------------------------------- 1804
consensus_13478#0      CAAAGAACCATCGCCAGCCTACGCTTGGGTGAAATGCGAGTGGGTGGAAG-ACGACGACT 1314
consensus_13478#2      CAAAGAACCATCGCCAGGTTAAAACGGCACATTATCTCTGCAGATCATGGCATTTCAATT 333
                       *                                                           

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      GCTACGAGACGCTGCTGGCGGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCG 1374
consensus_13478#2      TCTCT----CGCTACCTCTCA-----ATCGAATTCTTTAA-GGTGATG----CGATGGCG 379
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      GCACTCGGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGG 1434
consensus_13478#2      -TGTCTGGTCTACC---CTGATCTGCACTCTACCGCTTGG-----GTGAAATGCGAGTGG 430
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      A-GAGGATCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGC 1493
consensus_13478#2      GTGGAAAACGACGACTGCTACCACACCCCGCTG-GCAGCGGGGATCACTCCCTTACCGGC 489
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      TCCATGTGAAAATCGTGAATTGGGACCGGGACAAAAGCTTTCGTCTAG-CTGGCTTCGAT 1552
consensus_13478#2      ACTGTTAACGAGGCCCGCACCCGGTACACGCGGCTGACCCTCATCAGGACCCAGGACAAT 549
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      GGCCACTGTGCCGGAACGATCAGCTGCTAGCTGATTGTAGGCAATAAATACAAGGCAACG 1612
consensus_13478#2      TCCAAATGCCTCGGAGAGGATCACCAATTGTTGATCCCA------AAACCCCGGA----- 598
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      TGGAAAATCAAGACTGGAATGATCAGCTACGCGTTAATCGTTCATTCGTTCGCTGTCGAC 1672
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      CTTTCGACGGACAGGTGTAATTATGTGGATCTACACAATCAATTAGGTGGACACTATGTG 1732
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ------------------------------------------------------------
consensus_13478#4      ------------------------------------------------------------
consensus_13478#1      ------------------------------------------------------------
consensus_13478#0      ATTATGTTTCACGTGACTAATAATTGAGTATGTAAATAAATGAAGATCATACATGTTACT 1792
consensus_13478#2      ------------------------------------------------------------
                                                                                   

consensus_13478#3      ---------------------------------------------
consensus_13478#4      ---------------------------------------------
consensus_13478#1      ---------------------------------------------
consensus_13478#0      GATTCAAAACTCGTCATTCTTGGAATCAAAGGGCCAAAAAAAAAA 1837
consensus_13478#2      ---------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)