These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2078 fasta sequence [GCTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGA-TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT-CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT-CGCCTCCGCCGCCTACT-CCTTCGTCCGCCT-CGACGT-CATCTACCGCTCCAT-CGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT-CACCGT-CTACTACTTCAA-GCGCCCGCGCCCGGTGTACCTCGTCGAGT-T-CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCC-TCATCG-TCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCA-TGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGG-ACGCACAAGGGCGCCACCGACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCGTGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCCTGGAGGACAGGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCAGCAGCTCGCTGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCAACCGCGTGTGGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCGCGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGGGAAGAC-TTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAG-CAGTGCCATTCTTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGGGGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGAACAATATTGCCAAGTGTAAATTATAAACGAGAAATCAATGTTACACG] [+] EMBL AK119222 [GCTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGA TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT CGCCTCCGCCGCCTACT CCTTCGTCCGCCT CGACGT CATCTACCGCTCCAT CGACCCGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT CACCGT CTACTACTTCAA GCGCCCGCGCCCGGTGTACCTCGTCGAGT T CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCC TCATCG TCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCA TGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGG ACGCACAAGGGCGCCACCGACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCGTGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCCTGGAGGACAGGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCAGCAGCTCGCTGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCAACCGCGTGTGGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCGCGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGGGAAGACTTTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAG CAGTGCCATTCTTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGGGGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGAACAATATTGCCAAGTGTAAATTATAAACGAGAAATCAATGTTACACG] [+] EMBL AK112059 [GCTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGA TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT CGCCTCCGCCGCCTACT CCTTCGTCCGCCT CGACGT CATCTACCGCTCCAT CGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT CACCGT CTACTACTTCAA GCGCCCGCGCCCGGTGTACCTCGTCGAGT T CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCC TCATCG TCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCA TGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCGTATGGGCGGCGTGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGG ACGCACAAGGGCGCCACCGACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCGTGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCCTGGAGGACAGGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCAGCAGCTCGCTGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCAACCGCGTGTGGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCGCGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGATTACGTTTTCGTGACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGGGAAGAC TTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAG CAGTGCCATTCTTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGGGGAAACAGAATGGAGGACATCACAAC ] [+] EMBL CB684513 [ CCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGA TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT CGCCTCCGCCGCCTACT CCTTCGTCCGCCT CGACGT CATCTACCGCTCCAT CGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT CACCGT CTACTACTTCAA GCGCCCGCGCCCGGTGTACCTCGTCGAGT T CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCGAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGATGCTCAACATGGCCGAGGCGAGGATGGAGGCCGACGCCGTCATGTTCG ] [-] EMBL CB967432 [ GCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGA TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT CGCCTCCGCCGCCTACT CCTTCGTCCGCCT CGACGT CATCTACCGCTCCAT CGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT CACCGT CTACTACTTCAA GCGCCCGCGCCCGGTGTACCTCGTCGAGT T CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGT ] [-] EMBL CB966562 [ GCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGCCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGNCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGA TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT CGCCTCCGCCGCCTACT CCTTCGTCCGCCT CGACGT CATCTACCGCTCCAT CGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT CACCGT CTACTACTTCAA GCGCCCGCGCCCGGTGTACCTCGTCGAGT T CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGC ] [-] EMBL CB964952 [ tCTTATCTGTGAGCTCCATGGAGTCGCCTTTCATGTATTGGGAGCGGCTCCCGTCGGAGAT GCGTTCCGCGACGACGCTCGGTCGGCCGGGGGGGAGTGGGCTCCGAGCATCGTGATCAAGATTCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGTGCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTGCGCCTCCGCCGCCTACTGCCTTCGTCCGCCTGCGACGTGCATCTACCGCTCCATGCGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCTGCACCGTGCTACTACTTCAA GCGCCCGCGCCCGGTGTACCTCGTCGAGTGTGCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCG ] [-] EMBL CB964806 [ gtAGATGTCTTTCCGCGCCGACGCTCGGGCGCCCGGGCGGGAGTGGGCGCCGAGCATCGTGATCAAGA TCCGGCGCCGCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGT CACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCT CGCCTCCGCCGCCTACT CCTTCGTCCGCCT CGACGT CATCTACCGCTCCAT CGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCT CACCGT CTACTACTTCAAGGCGCCCGCGCCCGGTGTACCTCGTCGAGT T CGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGAC AGACGTACCTCCCTCCCGGC ] [-] EMBL CB967193 [ gaGCGA GAT GA GCCGA GCCGTCATGTTC GGT CCTCGACGCGTTC TCGAGTCC CCGGGATC ACCCGGAACGCGACGTGGGCATCCTTCATCGTTCAACTGCACCCTTTTCAACCCGACCCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATTGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGG ACGCACAAGGGCGCCACCGACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCGT ] [+] EMBL AU071146 [ CAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGGAACGCACAAGGGCGCCACCGACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGC ] [+] EMBL AU163490 [ TCGAATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGG ACGCACAAGGGCGCCACCGACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAA GGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCGTGCAC ] [-] EMBL CB684514 [ TCCTCCCGCTCACGGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCGTGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCCTGGAGGACAGGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCAGCAGCTCGCTGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCAACCGCGTGTGGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCGCGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGTTGGGGAAGAC TTTTTTTTTTCGTCGTTTTTTCTTGTTCGCATAGGTTTGCTGTAGACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGTTAGCCAGTGCCATTCTTAAGGGTTTTTGTACTACCAtg ] consensusID : consensus_13489#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1537 fasta sequence [CTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGATCCGGCGCCGCCTCCCGAACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGTCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTCGCCTCCGCCGCCTACTCCTTCGTCCGCCTCGACGTCATCTACCGCTCCATCGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCTCACCGTCTACTACTTCAAGCGCCCGCGCCCGGTGTACCTCGTCGAGTTCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCCTCATCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCTCTGGCGCGCGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGGGAAGACTTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAGCAGTGCCATTCTTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGGGGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGAACAATATTGCCAAGTGTAAATTATAAACGAGAAATCAATGTTACACGTTGTTTGTGTAAGATTCTGAATTTATGTTCAAT] [+] EMBL AK111566 [CTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGATCCGGCGCCGCCTCCCGAACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCGTCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTCGCCTCCGCCGCCTACTCCTTCGTCCGCCTCGACGTCATCTACCGCTCCATCGACCTGCTCACCTGCGTCGCCTGGCTCGGGACCGCCGTGCTGCTGCTCACCGTCTACTACTTCAAGCGCCCGCGCCCGGTGTACCTCGTCGAGTTCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCCTCATCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATTGCATCTTCCTCTGGCGCGCGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGGGAAGACTTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAGCAGTGCCATTCTTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGGGGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGAACAATATTGCCAAGTGTAAATTATAAACGAGAAATCAATGTTACACGTTGTTTGTGTAAGATTCTGAATTTATGTTCAAT] [+] EMBL CB640933 [ ATTCACGCCAAA GCAACCTCGAGTTCAGCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGCGGGC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13489#0 GCTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTAC 60 consensus_13489#1 -CTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCAGCTCGGTAC 59 *********************************************************** consensus_13489#0 GTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGG 120 consensus_13489#1 GTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGAGCTCCATGG 119 ************************************************************ consensus_13489#0 AGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGC 180 consensus_13489#1 AGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGACGCGC 179 ************************************************************ consensus_13489#0 GGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGATCCGGCGCCGCCTCCCGG 240 consensus_13489#1 GGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGATCCGGCGCCGCCTCCCGA 239 *********************************************************** consensus_13489#0 ACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCG 300 consensus_13489#1 ACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCG 299 ************************************************************ consensus_13489#0 TCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTCGCCTCCGCCGCCTACTCCTTCG 360 consensus_13489#1 TCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTCGCCTCCGCCGCCTACTCCTTCG 359 ************************************************************ consensus_13489#0 TCCGCCTCGACGTCATCTACCGCTCCATCGACCTGCTCACCTGCGTCGCCTGGCTCGGGA 420 consensus_13489#1 TCCGCCTCGACGTCATCTACCGCTCCATCGACCTGCTCACCTGCGTCGCCTGGCTCGGGA 419 ************************************************************ consensus_13489#0 CCGCCGTGCTGCTGCTCACCGTCTACTACTTCAAGCGCCCGCGCCCGGTGTACCTCGTCG 480 consensus_13489#1 CCGCCGTGCTGCTGCTCACCGTCTACTACTTCAAGCGCCCGCGCCCGGTGTACCTCGTCG 479 ************************************************************ consensus_13489#0 AGTTCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGA 540 consensus_13489#1 AGTTCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTCGAGA 539 ************************************************************ consensus_13489#0 TGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCA 600 consensus_13489#1 TGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATCACCA 599 ************************************************************ consensus_13489#0 ATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGA 660 consensus_13489#1 ATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCGCCGA 659 ************************************************************ consensus_13489#0 GGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACG 720 consensus_13489#1 GGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTCGACG 719 ************************************************************ consensus_13489#0 CGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCCTCATCGTCAACT 780 consensus_13489#1 CGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCCTCATCGTCAACT 779 ************************************************************ consensus_13489#0 GCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGC 840 consensus_13489#1 GCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAGATGC 839 ************************************************************ consensus_13489#0 GGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATGGGGTGCAGCGCCGGCCTCATCGCCA 900 consensus_13489#1 GGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATGGGGTGCAGCGCCGGCCTCATCGCCA 899 ************************************************************ consensus_13489#0 TCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCA 960 consensus_13489#1 TCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTCAGCA 959 ************************************************************ consensus_13489#0 CGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATT 1020 consensus_13489#1 CGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCGAATT 1019 ************************************************************ consensus_13489#0 GCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCCGGCC 1080 consensus_13489#1 GCATCTTCC--------------------------------------------------- 1028 ********* consensus_13489#0 GCGCCAAGTACCGGTTGCTGCACACCGTGCGGACGCACAAGGGCGCCACCGACGAGTGCT 1140 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 TCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCGCGGG 1200 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 AGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCCCTCG 1260 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 TCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTGTTCC 1320 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 GCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTCTGCG 1380 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 TGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCCTGGAGGACA 1440 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 GGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCAGCAGCTCGC 1500 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 TGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCAACCGCGTGT 1560 consensus_13489#1 ------------------------------------------------------------ consensus_13489#0 GGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCGCGCTCCGCG 1620 consensus_13489#1 ------------------------------------------TCTGGCGCGCGCTCCGCG 1046 ****************** consensus_13489#0 ACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACT 1680 consensus_13489#1 ACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTGGACT 1106 ************************************************************ consensus_13489#0 GCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCAC 1740 consensus_13489#1 GCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTGACCTCGCAC 1166 ************************************************************ consensus_13489#0 AAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGG 1800 consensus_13489#1 AAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCATATGCTGGG 1226 ************************************************************ consensus_13489#0 GAAGACTTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCG 1860 consensus_13489#1 GAAGACTTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAGACATTGCCG 1286 ************************************************************ consensus_13489#0 GTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAGCAGTGCCATTC 1920 consensus_13489#1 GTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAGCAGTGCCATTC 1346 ************************************************************ consensus_13489#0 TTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGG 1980 consensus_13489#1 TTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAGAAGTTGGGG 1406 ************************************************************ consensus_13489#0 GGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGAACAATATTG 2040 consensus_13489#1 GGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGAACAATATTG 1466 ************************************************************ consensus_13489#0 CCAAGTGTAAATTATAAACGAGAAATCAATGTTACACG---------------------- 2078 consensus_13489#1 CCAAGTGTAAATTATAAACGAGAAATCAATGTTACACGTTGTTTGTGTAAGATTCTGAAT 1526 ************************************** consensus_13489#0 ----------- consensus_13489#1 TTATGTTCAAT 1537 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||