These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2384 fasta sequence [CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCTCTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT-GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC-AGACTTTCTACTAATACCATTC-AAGTCAAC-TGGAAGC-TTGTTC-AACAACAGTCGGGGAGTGG-TAAGCGGGATGCAT-GGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT-GGTAAGTTGAACTCGCACTCGCCGCGTAC-ACAAAGGCCAACCCAT-GCTGGTGGCAAAGA--GGGA-GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT-CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG-CGCAACATTCGGGTGGATG-ACG-ACG-ATG-ATGGCGTCTGCAGTTTGATCCA-ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT-TG-TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT-CCT-CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT-GATTTCCCTG-CCTCCCCGAGACA-CCCTGCTTTTGTT-GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT-ATCCCATTTGGAAATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK101555 [CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCTCTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC AGACTTTCTACTAATACCATTC AAGTCAAC TGGAAGC TTGTTC AACAACAGTCGGGGAGTGG TAAGCGGGATGCAT GGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT GGTAAGTTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCAT GCTGGTGGCAAAGA GGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTC GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCATTTGGACATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTT ] [+] EMBL AK101539 [ CACTCTCTTCGCGTTCTCTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC AGACTTTCTACTAATACCATTC AAGTCAAC TGGAAGC TTGTTC AACAACAGTCGGGGAGTGG TAAGCGGGATGCAT GGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTAGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATCCAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGATAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT GGTAAGTTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCAT GCTGGTGGCAAAGA GGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAT ] [+] EMBL C73765 [ ngnanGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTCAAGACTTTCTACTAATACCATTCAAAGTCAACTTGGAAGCTTTGTTCAAACAACAGTCGGGGAGTGGTTAAGCGGGATTCATNGGAAGGNGAAATTTTCTTCAAATG ] [+] EMBL C99707 [ ggtngaagGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC AGACTTTCTACTAATACCATTC AAGTCAAC TGGAAGC TTGT ] [+] EMBL C73898 [ ttnggtGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGNGAAGCAGAATACTNTCGTTTCCGATGCGTCCAACGACCCCGNGAGGTTGAGANAGGAACAAGCGGCCGTCAAGGCACAAGGTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGGATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTNGTGC ] [+] EMBL CA765075 [ ACTGAAAAAT NAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAGAAGTTGCTGAACTGACTGTTGCTGATCCTGCGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTTACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTNCCATCCTCTAATGGGTAAGNTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCATGGCTGGTGGCAAAGAAGGGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACG ] [+] EMBL C99708 [ agnctaACATGGCTGCAACACAATNTGCGAAGGCGAAACTGCGGGGACAG ATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT GGTAAGTTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCAT GCTGGTGGCAAAGA GGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTTCCATCGATCGAGCACCAAAACCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAaaaaaaaa ] [+] EMBL BI805529 [ TGAACTCGCACTCGCCGCGTACAACAAAGGCCAACCCAT GCT GTGTCAAAGA GGGATGTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACC AATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTTGATCCCATTTGGACATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATGTCC ] [+] EMBL AU182700 [ CTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAaaaaaaaa ] [+] EMBL BI808906 [ AAACGCTGAAGAGTT CATCGATCGAGCACC AATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCT CAGTTTGATCCACATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTTCTGCTATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTTCCCTCCTCCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTTGGATTT CCTGCCCTCCCCGAGACACCCCTGCTTTTGTTGGACCAAG ] [+] EMBL C99553 [ GGGTTGNCGCAACATTCGGGTGGATGNACGCACGTATGNATGGCGTCTGCNGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAaaaaaaaa ] [+] EMBL AU033052 [ gnTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGNCCTTT CCT CTGCCATGTTCNTGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GNGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCATTTGGANATNTCTTCTGNGTTTTCTTCTTATAACTGACTANNNTNTTGTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_13510#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 471 fasta sequence [ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTTNGGAGGGGTNAAGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGCATTTAAGTAAGACCTGGAGAAGAGATACTTTCGTTTCNATGNGTCCACGACCCCAGAGTTTANAAAGACAAGGGCC] [+] EMBL OSS1762A [ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTTNGGAGGGGTNAAGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGCATTTAAGTAAGACCTGGAGAAGAGATACTTTCGTTTCNATGNGTCCACGACCCCAGAGTTTANAAAGACAAGGGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13510#0 CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCT 60 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 CTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGG 120 consensus_13510#1 -----------ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGG 49 ************************************************* consensus_13510#0 GAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAAC 180 consensus_13510#1 GAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAAC 109 ************************************************************ consensus_13510#0 CCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATC 240 consensus_13510#1 CCTTGGGCGTGCGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATC 169 ****************** ***************************************** consensus_13510#0 CGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAA 300 consensus_13510#1 CGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAA 229 ************************************************* ********** consensus_13510#0 GGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCC 360 consensus_13510#1 GGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCC 289 ************************************************************ consensus_13510#0 GGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAAT-GAGGCTGTCCAGGAGGTT- 418 consensus_13510#1 GGTGATATCGGAGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTT 349 **************************** *********** ***** **** ****** consensus_13510#0 GGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGT-GGTGCGCGATGTCAGTCAAGA 477 consensus_13510#1 NGGAGGGGTNAAGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGC-ATTTAAGT-AAGA 407 ******** * ****** ******* ******* ** *** *** ** * *** **** consensus_13510#0 CCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGA 537 consensus_13510#1 CCTGGAGAAG--AGATACTTTCGTTTCN-ATGNGTCCA-CGACCCC-AGAGTTT---ANA 459 ********** ***** ******* *** ***** ******* **** ** * * consensus_13510#0 GGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATT 597 consensus_13510#1 AAGACAAG-GGCC----------------------------------------------- 471 ***** **** consensus_13510#0 CCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGATTCGTGGGCATCTCGTAAGGAG 657 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 GCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCG 717 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TGGTAGGAATGTCAGACTTTCTACTAATACCATTCAAGTCAACTGGAAGCTTGTTCAACA 777 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 ACAGTCGGGGAGTGGTAAGCGGGATGCATGGAAGGAGAAATTGTCTTCAAATGCATTTGC 837 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TCGTAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAG 897 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 GGATACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCC 957 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 CATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAG 1017 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGC 1077 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 ACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCC 1137 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 AAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGA 1197 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 GAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATC 1257 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAAC 1317 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGA 1377 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 AAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTA 1437 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAAC 1497 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAG 1557 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 ATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATT 1617 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 CTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTA 1677 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 CATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAG 1737 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAATGG 1797 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TAAGTTGAACTCGCACTCGCCGCGTACACAAAGGCCAACCCATGCTGGTGGCAAAGAGGG 1857 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 AGTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGC 1917 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TGAATGGAAACGCTGAAGAGTTCATCGATCGAGCACCAAATCCTCCTGTTGGGTTGCGCA 1977 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 ACATTCGGGTGGATGACGACGATGATGGCGTCTGCAGTTTGATCCAATTGTTTTGCTTCC 2037 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 GATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTTTG 2097 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTTCCTCTGCCATGTTC 2157 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 ATGTATAGCTGAAGCGTTTCCGGTTTGCTTTTGATTTCCCTGCCTCCCCGAGACACCCTG 2217 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 CTTTTGTTGAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTTA 2277 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TCCCATTTGGAAATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATG 2337 consensus_13510#1 ------------------------------------------------------------ consensus_13510#0 TCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2384 consensus_13510#1 ----------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||