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Oryza sativa
cluster # 13533 cluster # 13533       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13533#0 length = 1382 sequences # 8  
consensus_13533#1 length = 752 sequences # 5  

consensusID : consensus_13533#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1382
fasta sequence
                              [CGACGCGAGAGGAGACGAGACGAAGCCATCCGATCCCCACCCTTCCCCCCCTCCCCCTCCCCCCTCTTCAGCGCTGGAGGCGGCGGCGGCGGCGTCCCCTGGATCCCTCGGCGGCGGCGGTGGCGCACGGTTATGCCGAGAGGCACCCAGGTTCCAACACCGTGCACTGCCAGGGCTCTAGCATTCTCAGTAAGGATATGGAGTACACCCTCTACACCACAAGTTCCTCTGTATTGCACATTTCGCTGCTCGAGGAAGTTCTTGGCTGGAGGTTTTCTCTTTACGGAGACTTCCTCGTTATCTCTTTTGTCAACTGCACTTGAAGATCGCACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTGCTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAATGAAGAAAAAATATTATTCATGGGAGGAGTGCATCAATCTCCGTGAAGTGAAGTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAACTCAAGGAAGTCATAAGGGAG-AATGATATGTTATTCTTTGTTTTTGAATACATGGAATGCAATCTCTACCAGCTGATGAAGAGCAGGGGGAAGCCCTTTTCAGAGACTGAAGTCCGAAATTGGTGTTTTCAGATATTTCAAGCTTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGAAAATTTG-CTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCTGAACCACCATACACAGAATATGTGTCAACTCGCTGGTACCGTGCCCCTGAAGTTCTGCTCCA]

[+] EMBL CB631836             [CGACGCGAGAGGAGACGAGACGAAGCCATCCGATCCCCACCCTTCCCCCCCTCCCCCTCCCCCCTCTTCAGCGCTGGAGGCGGCGGCGGCGGCGTCCCCTGGATCCCTCGGCGGCGGCGGTGGCGCACGGTTATGCCGAGAGGCACCCAGGTTCCAACACCGTGCACTGCCAGGGCTCTAGCATTCTCAGTAAGGATATGGAGTACACCCTCTACACCACAAGTTCCTCTGTATTGCACATTTCGCTGCTCGAGGAAGTTCTTGGCTGGAGGTTTTCTCTTTACGGAGACTTCCTCGTTATCTCTTTTGTCAACTGCACTTGAAGATCGCACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTGCTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTCGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB631880             [CGACGCGAGAGGAGACGAGACGAAGCCATCCGATCCCCACCCTTCCCCCCCTCCCCCTCCCCCCTCTTCAGCGCTGGAGGCGGCGGCGGCGGCGTCCCCTGGATCCCTCGGCGGCGGCGGTGGCGCACGGTTATGCCGAGAGGCACCCAGGTTCCAACACCGTGCACTGCCAGGGCTCTAGCATTCTCAGTAAGGATATGGAGTACACCCTCTACACCACAAGTTCCTCTGTATTGCACATTTCGCTGCTCGAGGAAGTTCTTGGCTGGAGGTTTTCTCTTTACGGAGACTTCCTCGTTATCTCTTTTGTCAACTGCACTTGAAGATCGCACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTGCTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTCGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGNCATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB640002             [                             CCGATCCCCACCCTTCCCCCCCTCCCCCTCCCCCCTCTTCAGCGCTGGAGGCGGCGGCGGCGGCGTCCCCTGGATCCCTCGGCGGCGGCGGTGGCGCACGGTTATGCCGAGAGGCACCCAGGTTCCAACACCGTGCACTGCCAGGGCTCTAGCATTCTCATTAAGGATATGGAGTACACCCTCTACACCACAAGTTCCTCTGTATTGCACATTTCGCTGCTCGAGGAAGTTCTTGGCTGGAGGTTTTCTCTTTACGGAGACTTCCTCGTTATCTCTTTTGTCAACTGCACCTGAAGATCACACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAAGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF322895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAATGAAGAAAAAATATTATTCATGGGAGGAGTGCATCAATCTCCGTGAAGTGAAGTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAACTCAAGGAAGTCATAAGGGAGAAATGATATG TATTCTTTGGTTTTGAATACATGGA                                                                                                                                                                                                                                                                            ]
[+] EMBL CB643217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAATGAAGAAAAAATATTATTCATGGGAGGAGTGCATCAATCTCCGTGAAGTGAAGTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAACTCAAGGAAGTCATAAGGGAG AATGATATGTTATTCTTTGTTTTTGAATACATGGAATGCAATCTCTACCAGCTGATGAAGAGCAGGGGGAAGCCCTTTTCAGAGACTGAAGTCCGAAATTGGTGTTTTCAGATATTTCAAGCTTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGAAAATTTG CTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCTGAACCACCATACACAGAATATGTGTCAACTCGCTGGTACCGTGCCCCTGAAGTTCTGCTCCA]
[+] EMBL CB637175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAACAAAATGAAGAAAAATTATTATTCATGGGAGGAGTGCATCAATCTCCGTGAAGTGAACTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAAC                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB646493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGTGAAGTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAACTCAAGGAAGTCATAAGGGAG AATGATATGTTATTCTTTGTTTTTGAATACATGGAATGCAATCTCTACCAGCTGATGAAGAGCAGGGGGAAGCCCTTTTCAGAGACTGAAGTCCGAAATTGGTGTTTTCAGATATTTCAAGCTTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGAAAATTTG CTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCTGAACCACCATACACAGAATATGTGTCAACTCGCTGGTACCGTGCCCCTGAAGTTCTGC    ]
[+] EMBL CB654303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGAAAATTTGCCTAGTTACCAAGGAGCTCCTCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCTGAACCACCATACACAGAATATGTGTCAACTCGCTGGTACCGTGCCCCTGAAGTTCTGC    ]


>consensus_13533#0 CGACGCGAGAGGAGACGAGACGAAGCCATCCGATCCCCACCCTTCCCCCCCTCCCCCTCC CCCCTCTTCAGCGCTGGAGGCGGCGGCGGCGGCGTCCCCTGGATCCCTCGGCGGCGGCGG TGGCGCACGGTTATGCCGAGAGGCACCCAGGTTCCAACACCGTGCACTGCCAGGGCTCTA GCATTCTCAGTAAGGATATGGAGTACACCCTCTACACCACAAGTTCCTCTGTATTGCACA TTTCGCTGCTCGAGGAAGTTCTTGGCTGGAGGTTTTCTCTTTACGGAGACTTCCTCGTTA TCTCTTTTGTCAACTGCACTTGAAGATCGCACCTCATTCAGCAGCCGTCTTGCCTGGTCC CATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCG AGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAG CCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATT GTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTGCTTCCGTTTGCTCTCTTCTCCCCTAC ACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCA GGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGT ATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTC AAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAG ACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGT GACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCA ATCAAGAAAATGAAGAAAAAATATTATTCATGGGAGGAGTGCATCAATCTCCGTGAAGTG AAGTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAACTCAAGGAAGTCATAAGGGAG AATGATATGTTATTCTTTGTTTTTGAATACATGGAATGCAATCTCTACCAGCTGATGAAG AGCAGGGGGAAGCCCTTTTCAGAGACTGAAGTCCGAAATTGGTGTTTTCAGATATTTCAA GCTTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGAAAATTTG CTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCT GAACCACCATACACAGAATATGTGTCAACTCGCTGGTACCGTGCCCCTGAAGTTCTGCTC CA



consensusID : consensus_13533#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 752
fasta sequence
                              [AGGAAGTTCTTGCCTGTAGGTTTTCTCTTTACGGAGACTTCCTCAGTTATCTCTCTTTGTCAACTGCACCTGAAGATCACACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGT-AACAAACCGAGTGAAGGTGTTCAAGTTTTTTT-GTCAGAGTATGGGTATTGCTTATA-GAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAATGAAGAAAAAATATTATACCTCTCCATTTTTA]

[+] EMBL CB676130             [AGGAAGTTCTTGCCTGTAGGTTTTCTCTTTACGGAGACTTCCTCAGTTATCTCTCTTTGTCAACTGCACCTGAAGATCACACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGT AACAAACCGAGTGAAGGTGTTCAAGTTTTTTT GTCAGAGTATGGGTATTGCTTATA GAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAATGAAGAAAAAATATTATACCTCTCCATTTTTA]
[-] EMBL CB676129             [            gCTGGAGGTTTTCTCTTTACGGAGACTTCCTC GTTATCTCT TTTGTCAACTGCACCTGAAGATCACACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGT AACAAACCGAGTGAAGGTGTTCAAGTTTTTTT GTCAGAGTATGGGTATTGCTTATA GAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAATGAAGAAAAAATATTATGCCTCTC        ]
[+] EMBL C71810               [                                                                                                 TCTTGCCTGGTCCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTNTNCGAGCATGGTGCATCTNATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTNAGGCTTAATCTCTAGGTTCTGGTTTNCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTGGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTNAGGCTTTGTGTTTGATGGCGTAAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTNGTCAGAGTATGGGTATTGCTTATAGGAGTTTTTCCAGAAGCGTTG                                                                                                                                                                                                                                                      ]
[+] EMBL CF324488             [                                                                                                                                                                  TTTCTTCGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGT AACAAACCGAGTGAAGGTGTTCAAGTTTTTTT GTCAGAGTATGGGTATTGCTTATA GAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGC                                                                                                                                               ]
[+] EMBL CF306840             [                                                                                                                                                                         GAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGTTTGATGGCGT AACAAACCGAGTGAAGGTGTTCAAGTTTTTTT GTCAGAGTATGGGTATTGCTTATA GAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTG                                                ]


>consensus_13533#1 AGGAAGTTCTTGCCTGTAGGTTTTCTCTTTACGGAGACTTCCTCAGTTATCTCTCTTTGT CAACTGCACCTGAAGATCACACCTCATTCAGCAGCCGTCTTGCCTGGTCCCATGCTATTG CACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTTCGAGCATGGTGC ATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATCAGCCAGCAAAAG TTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCATTGTCAGGCTTA ATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCTACACTGCTTGCT TTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGTCAGGCTTTGTGT TTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGAGTATGGGTATTG CTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCTTCAAAGGCATTT CAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATAAGACCAGCTTTA CTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTGGTGACGGAACAT TTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTGCAATCAAGAAAA TGAAGAAAAAATATTATACCTCTCCATTTTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13533#0      CGACGCGAGAGGAGACGAGACGAAGCCATCCGATCCCCACCCTTCCCCCCCTCCCCCTCC 60
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      CCCCTCTTCAGCGCTGGAGGCGGCGGCGGCGGCGTCCCCTGGATCCCTCGGCGGCGGCGG 120
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      TGGCGCACGGTTATGCCGAGAGGCACCCAGGTTCCAACACCGTGCACTGCCAGGGCTCTA 180
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      GCATTCTCAGTAAGGATATGGAGTACACCCTCTACACCACAAGTTCCTCTGTATTGCACA 240
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      TTTCGCTGCTCGAGGAAGTTCTTGGCTGGAGGTTTTCTCTTTACGGAGACTTCCTC-GTT 299
consensus_13533#1      ------------AGGAAGTTCTTGCCTGTAGGTTTTCTCTTTACGGAGACTTCCTCAGTT 48
                                   ************ *** *************************** ***

consensus_13533#0      ATCTCT-TTTGTCAACTGCACTTGAAGATCGCACCTCATTCAGCAGCCGTCTTGCCTGGT 358
consensus_13533#1      ATCTCTCTTTGTCAACTGCACCTGAAGATCACACCTCATTCAGCAGCCGTCTTGCCTGGT 108
                       ****** ************** ******** *****************************

consensus_13533#0      CCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTT 418
consensus_13533#1      CCCATGCTATTGCACATTAGAGTCGACTATTGATTACAGTGCAGCTGTAGCACATTTCTT 168
                       ************************************************************

consensus_13533#0      CGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATC 478
consensus_13533#1      CGAGCATGGTGCATCTCATCCTCTTGCATCCTTCCGGTAGTTTTTGTTGTGGCACTGATC 228
                       ************************************************************

consensus_13533#0      AGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCA 538
consensus_13533#1      AGCCAGCAAAAGTTACCATCGGAACTTCTTTGGACAATCGGATCTGACATTAGATCTTCA 288
                       ************************************************************

consensus_13533#0      TTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTGCTTCCGTTTGCTCTCTTCTCCCCT 598
consensus_13533#1      TTGTCAGGCTTAATCTCTAGGTTCTGGTTTTCTTTACTTCCGTTTGCTCTCTTCTCCCCT 348
                       *********************************** ************************

consensus_13533#0      ACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGT 658
consensus_13533#1      ACACTGCTTGCTTTTTGTTTGATCATCCCAAGATTTGGTGCATACTACGCAGTTCTTTGT 408
                       ************************************************************

consensus_13533#0      CAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGA 718
consensus_13533#1      CAGGCTTTGTGTTTGATGGCGTAACAAACCGAGTGAAGGTGTTCAAGTTTTTTTGTCAGA 468
                       ************************************************************

consensus_13533#0      GTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCT 778
consensus_13533#1      GTATGGGTATTGCTTATAGAGTTTTTCCAGAAGCGTTGAGTGGCTTTGCTGATCTACCCT 528
                       ************************************************************

consensus_13533#0      TCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATA 838
consensus_13533#1      TCAAAGGCATTTCAGCAATACACATATGAGTCTTGTTCACAACAGGGCTCTTCTAGAATA 588
                       ************************************************************

consensus_13533#0      AGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTG 898
consensus_13533#1      AGACCAGCTTTACTCTCCAGCTAGTAAAAATGGAGAGGTATAAGATTATTAAGGAAGTTG 648
                       ************************************************************

consensus_13533#0      GTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTG 958
consensus_13533#1      GTGACGGAACATTTGGGAGTGTTTGGCGCGCGATCAACAAAGAGAGTGGTGAAGTGGTTG 708
                       ************************************************************

consensus_13533#0      CAATCAAGAAAATGAAGAAAAAATATTATTCATGGGAGGAGTGCATCAATCTCCGTGAAG 1018
consensus_13533#1      CAATCAAGAAAATGAAGAAAAAATATTATACCTC-----------TCCATTTTTA----- 752
                       ***************************** * *            ** ** *        

consensus_13533#0      TGAAGTCTTTGCGAAGGATGAACCATCCGAACATTGTGAAACTCAAGGAAGTCATAAGGG 1078
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      AGAATGATATGTTATTCTTTGTTTTTGAATACATGGAATGCAATCTCTACCAGCTGATGA 1138
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      AGAGCAGGGGGAAGCCCTTTTCAGAGACTGAAGTCCGAAATTGGTGTTTTCAGATATTTC 1198
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      AAGCTTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGAAAATT 1258
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      TGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTT 1318
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      CTGAACCACCATACACAGAATATGTGTCAACTCGCTGGTACCGTGCCCCTGAAGTTCTGC 1378
consensus_13533#1      ------------------------------------------------------------
                                                                                   

consensus_13533#0      TCCA 1382
consensus_13533#1      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)