cluster # 13574

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Oryza sativa
cluster # 13574 cluster # 13574 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13574#0 length = 2279 sequences # 5
consensus_13574#1 length = 1127 sequences # 3

consensus_13574#2 length = 755 sequences # 4
consensus_13574#3 length = 396 sequences # 1

consensusID : consensus_13574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2279
fasta sequence

                              [CGGCGCAGGCTGCGGCGGAGGCGGCGGTGGGCGCGATCGGGTGCGGGTACGACCTCACGAGCGACCTCCGCCTCAGCCGCGTCAAGGCGGGCGGGAGGCTGGTGGACATCGACGGGGCGAGCGGCGCGGCGAGACGGGAGCTGGTCCTCCCCTGGGGAGCCGTCGTGGGGGGCGTGCCGGTGGGGATCGTCGCCGACAAGGGGGAGCGCACCCGGTTCCGCTCCGACGTCCTCTCCTTCGCTCAGATGGCGGAGCAGGTGAACCAGACGATGTCGGTGGCGGGGAAGATCCCGTCGGGCGCGTTCAACGCCATGTTCGACTATCACGGGTGCTGGCACAAGGACGCGGCCGCCACGGGGAGCCTCTGCTTCGACGGCCGCTTCATCGAGCTCTACGCCGTCGAGGCCCCCCGCGCGCACCTCGCCCTGCTCGACCGCGTCAAGCGCGACGTCCCGCCCTTCTGGGACCCCGCTGCTCTCGCCGAATTCATCGACAAGTACGGGACGCACGTCATCGCCGGGGTGAAGATGGGAGGGAAGGATGTGGTCTGCATCAAGCAGCTCAAGGGATCCAATCTCACACAGAGCGATGTGCAGTCTCGGCTCAAGAAACTCTCCGACGACAAGCTCGCTCAGGATTCACCTGAAAGTTTAACTGCAAGAGACGACAAGTTCTTGCTGGGATTAAACGGGAGTTTATTATTGGGTCCTGGATCTGCTGCTTGGCGGTCGTTCAGACCATCAGTCGTGTCACACAAAGATGACATCCTCAGTATCCACATCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCGGTTCACCGGACGTCATCTCTATGGCTT-TTGTGCCGATTACTTCTCT-GCTCACTGGTGTTCGAGGCTGCGGGTTCCT-GAATCATGCAGTGAACCTCTACCTCAGATACAAACCTCCAATAGAGGAACTCCATCAATTTCTGGAATTCCAGGTGCCACGACAATGGGCTCCAGAGTTTGGGGAGCTCCCTCTGGCTTTGGGCCCGAGAAAGAAGAAGAACAGCCTGCCATCTCTTCAGTTTACTCTCATGGGTCCTAAGCTTCATGTCACCACTGCCAAGGCTGATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCGGCGAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAG-AAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGATGTAACTGGTTCAATGGAAGGAGAGAGAGAAGACACCGGCATGGTTGAGGGTCGAAGAGGAGACGAGATCGTCCAATCGATGGCTAGTTGCAAGCGCATGATTAGTTATTTATGTAGTTCACAAATTTGTTGAATAAGGGGTTGAATCGAGATCTCCTATATGTTTTTTGTTCTAGGGTTTGAATGGTGCACCCACAAGGAGACACGGTCGTGGAATATTTCATCTTTCTAGGAATAAATCGATAAAATGTGTAACTTAAATCGATGCAAATCTTCGGTGATATTTTAACCAATCATGTTTGTGAAACACAATATAAATCTCTTCTTGTAAAACAAAATATATATCTCAAAAGAAATAAAGGGAGG]

[+] EMBL AK069566             [CGGCGCAGGCTGCGGCGGAGGCGGCGGTGGGCGCGATCGGGTGCGGGTACGACCTCACGAGCGACCTCCGCCTCAGCCGCGTCAAGGCGGGCGGGAGGCTGGTGGACATCGACGGGGCGAGCGGCGCGGCGAGACGGGAGCTGGTCCTCCCCTGGGGAGCCGTCGTGGGGGGCGTGCCGGTGGGGATCGTCGCCGACAAGGGGGAGCGCACCCGGTTCCGCTCCGACGTCCTCTCCTTCGCTCAGATGGCGGAGCAGGTGAACCAGACGATGTCGGTGGCGGGGAAGATCCCGTCGGGCGCGTTCAACGCCATGTTCGACTATCACGGGTGCTGGCACAAGGACGCGGCCGCCACGGGGAGCCTCTGCTTCGACGGCCGCTTCATCGAGCTCTACGCCGTCGAGGCCCCCCGCGCGCACCTCGCCCTGCTCGACCGCGTCAAGCGCGACGTCCCGCCCTTCTGGGACCCCGCTGCTCTCGCCGAATTCATCGACAAGTACGGGACGCACGTCATCGCCGGGGTGAAGATGGGAGGGAAGGATGTGGTCTGCATCAAGCAGCTCAAGGGATCCAATCTCACACAGAGCGATGTGCAGTCTCGGCTCAAGAAACTCTCCGACGACAAGCTCGCTCAGGATTCACCTGAAAGTTTAACTGCAAGAGACGACAAGTTCTTGCTGGGATTAAACGGGAGTTTATTATTGGGTCCTGGATCTGCTGCTTGGCGGTCGTTCAGACCATCAGTCGTGTCACACAAAGATGACATCCTCAGTATCCACATCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCGGTTCACCGGACGTCATCTCTATGGCTT TTGTGCCGATTACTTCTCT GCTCACTGGTGTTCGAGGCTGCGGGTTCCT GAATCATGCAGTGAACCTCTACCTCAGATACAAACCTCCAATAGAGGAACTCCATCAATTTCTGGAATTCCAGGTGCCACGACAATGGGCTCCAGAGTTTGGGGAGCTCCCTCTGGCTTTGGGCCCGAGAAAGAAGAAGAACAGCCTGCCATCTCTTCAGTTTACTCTCATGGGTCCTAAGCTTCATGTCACCACTGCCAAGGCTGATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCGGCGAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAG AAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGATGTAACTGGTTCAATGGAAGGAGAGAGAGAAGACACCGGCATGGTTGAGGGTCGAAGAGGAGACGAGATCGTCCAATCGATGGCTAGTTGCAAGCGCATGATTAGTTATTTATGTAGTTCACAAATTTGTTGAATAAGGGGTTGAATCGAGATCTCCTATATGTTTTTTGTTCTAGGGTTTGAATGGTGCACCCACAAGGAGACACGGTCGTGGAATATTTCATCTTTCTAGGAATAAATCGATAAAATGTGTAACTTAAATCGATGCAAATCTTCGGTGATATTTTAACCAATCATGTTTGTGAAACACAATATAAATCTCTTCTTGTAAAACAAAATATATATCTCAAAAGAAATAAAGGGAGG]
[+] EMBL CB637610             [                                                                                                                                                                                                                        TCCGCTCCGACGTCCTCTCCTTCGCTCAGATGGCGGAGCAGGTGAACCAGACGATGTCGGTGGCGGGGAAGATCCCGTCGGGCGCGTTCAACGCCATGTTCGACTACCACGGGTGCTGGCACAAGGACGCGGCCGCCACGGGGAGCCTCTGCTTCGACGGCCGCTTCATCGAGCTCTACGCCGTCGAGGCCCCCCGCGCGCACCTCGCCCTGCTCGACCGCGTCAAGCGCGACGTCCCGCCCTTCTGGGACCCCGCTGCTCTCGCCGAATTCATCGACAAGTACGGGACGCACGTCATCGCCGGGGTGAAGATGGGAGGGAAGGATGTGGTCTGCATCAAGCAGCTCAAGGGATCCAATCTCACACAGAGCGATGTGCAGTCTCGGCTCAAGAAACTCTCCGACGACAAGCTCGCTCAGGATTCACCTGAAAGTTTAACTGCAAGAGACGACAAGTTCTTGCTGGGATTAAACGGGAGTTTATTATTGGGTCCTGGATCTGCTGCTTGGCGGTCGTTCAAACCATCAGTCGTGTCACACAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BU667119             [                                                                                                                                                                                                                                                                                                                                                                             TGCTTCGACGGCCGCTTCGTCGAGCTCTAGGCCGTCGAGGCCCCCCGCGCGCACCTCGCCCTGCTCGACCGCGTCAAGCGCGACGTCCCGCCCTTCTGGGACCCCGCTGCTCTCGCCGAATTCATCGACAAGTACGGGACGCACGTCATCGCCGGGGTGAAGATGGGAGGGAAGGATGTGGTCTGCATCAAGCAGCTCAAGGGATCCAATCTCACACAGAGCGATGTGCAGTCTCGGCTCAAGAAACTCTCCGACGACAAGCTCGCTCAGGATTCACCTGAAAGTTTAACTGCAAGAGACGACAAGTTCTTGCTGGGATTAAACGGGAGTTTATTATTGGGTCCTGGATCTGCTGCTTGGCGGTCGTTCAGACCATCAGTCATGTCACACAAAGATGACATCGTCAGTATCCACATCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAAATGGCTTTCGACGATCAGCGGTTCACCGGACGTCATCTCTATGGCTTACAGTGCCGATTACTTCTCTGGCTCACTGGTGGTCGAGGCTGCGGGTTCCTGGAATCATGCAGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB661345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGGTTCACCGGACGTCATCTCTATGGCTT TTGTGCCGATTACTTCTCT GCTCACTGGTGTTCGAGGCTGCGGGTTCCT GAATCATGCAGTGAACCTCTACCTCAGATACAAACCTCCAATAGAGGAACTCCATCAATTTCTGGAATTCCAGGTGCCACGACAATGGGCTCCAGAGTTTGGGGAGCTCCCTCTGGCTTTGGGCCCGAGAAAGAAGAAGAACAGCCTGCCATCTCTTCAGTTTACTCTCATGGGTCCTAAGCTTCATGTCACCACTGCCAAGGCTGATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCGGCGAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCATCCGGTGGGGGAGAAAAGTGGAGGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB685520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACTCTCATGGGTCCTAAGCTTCATGTCACCACTGCCAAGGCTGATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCGGCGAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAG AAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_13574#0
CGGCGCAGGCTGCGGCGGAGGCGGCGGTGGGCGCGATCGGGTGCGGGTACGACCTCACGA
GCGACCTCCGCCTCAGCCGCGTCAAGGCGGGCGGGAGGCTGGTGGACATCGACGGGGCGA
GCGGCGCGGCGAGACGGGAGCTGGTCCTCCCCTGGGGAGCCGTCGTGGGGGGCGTGCCGG
TGGGGATCGTCGCCGACAAGGGGGAGCGCACCCGGTTCCGCTCCGACGTCCTCTCCTTCG
CTCAGATGGCGGAGCAGGTGAACCAGACGATGTCGGTGGCGGGGAAGATCCCGTCGGGCG
CGTTCAACGCCATGTTCGACTATCACGGGTGCTGGCACAAGGACGCGGCCGCCACGGGGA
GCCTCTGCTTCGACGGCCGCTTCATCGAGCTCTACGCCGTCGAGGCCCCCCGCGCGCACC
TCGCCCTGCTCGACCGCGTCAAGCGCGACGTCCCGCCCTTCTGGGACCCCGCTGCTCTCG
CCGAATTCATCGACAAGTACGGGACGCACGTCATCGCCGGGGTGAAGATGGGAGGGAAGG
ATGTGGTCTGCATCAAGCAGCTCAAGGGATCCAATCTCACACAGAGCGATGTGCAGTCTC
GGCTCAAGAAACTCTCCGACGACAAGCTCGCTCAGGATTCACCTGAAAGTTTAACTGCAA
GAGACGACAAGTTCTTGCTGGGATTAAACGGGAGTTTATTATTGGGTCCTGGATCTGCTG
CTTGGCGGTCGTTCAGACCATCAGTCGTGTCACACAAAGATGACATCCTCAGTATCCACA
TCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCG
GTTCACCGGACGTCATCTCTATGGCTTTTGTGCCGATTACTTCTCTGCTCACTGGTGTTC
GAGGCTGCGGGTTCCTGAATCATGCAGTGAACCTCTACCTCAGATACAAACCTCCAATAG
AGGAACTCCATCAATTTCTGGAATTCCAGGTGCCACGACAATGGGCTCCAGAGTTTGGGG
AGCTCCCTCTGGCTTTGGGCCCGAGAAAGAAGAAGAACAGCCTGCCATCTCTTCAGTTTA
CTCTCATGGGTCCTAAGCTTCATGTCACCACTGCCAAGGCTGATTCTGGGAATCGTCCGG
TGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTAC
AGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCGGCGAGGTGGCGTCGGCGGAGG
ACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACG
TGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGA
CGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGG
GCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCG
TGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTG
CCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGA
ACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGT
ACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCA
CCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGC
TCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGC
ATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGATGTAACT
GGTTCAATGGAAGGAGAGAGAGAAGACACCGGCATGGTTGAGGGTCGAAGAGGAGACGAG
ATCGTCCAATCGATGGCTAGTTGCAAGCGCATGATTAGTTATTTATGTAGTTCACAAATT
TGTTGAATAAGGGGTTGAATCGAGATCTCCTATATGTTTTTTGTTCTAGGGTTTGAATGG
TGCACCCACAAGGAGACACGGTCGTGGAATATTTCATCTTTCTAGGAATAAATCGATAAA
ATGTGTAACTTAAATCGATGCAAATCTTCGGTGATATTTTAACCAATCATGTTTGTGAAA
CACAATATAAATCTCTTCTTGTAAAACAAAATATATATCTCAAAAGAAATAAAGGGAGG

consensusID : consensus_13574#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1127
fasta sequence

                              [TCCATGTTGTTTGTAGTAGAACTAGCTCACAGTGTGTTCCGTTTTGTTTCGTGCAGGCTGATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCNGGCGAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCACAGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCGGGTATTGCCCTGAGATGGGATCATTTTTACTGGCAAAAAAAAAAAAAAAAA]

[+] EMBL CF335506             [TCCATGTTGTTTGTAGTAGAACTAGCTCACAGTGTGTTCCGTTTTGTTTCGTGCAGGCTGATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCNGGCGAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB685521             [                                                                                                                                                                                                                                                                                                                                                                                                                             GTCGGAGTGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCACAGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCGGGTATTGCCCTGAGATGGGATCATTTTTACTGG                  ]
[-] EMBL CF335507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCACAGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTACTGGCAAAAAAAAAAAAAAAAA]




>consensus_13574#1
TCCATGTTGTTTGTAGTAGAACTAGCTCACAGTGTGTTCCGTTTTGTTTCGTGCAGGCTG
ATTCTGGGAATCGTCCGGTGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACC
GGCTGGGCGTTCACCTACAGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCNGGC
GAGGTGGCGTCGGCGGAGGACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAG
TCGCCGCTGCTGTCGCACGTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGAC
GACTGCGCGGCGATCGTGACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAG
GTGCTCTTCCTGCGGCTGGGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAG
TGGGATGGCCCGTTCGTCGTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCG
CGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTG
GGGGAGAAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCG
GTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTG
CCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTC
AAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGA
AGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAG
TACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTA
GTAGTCAGGTATACTATTTGTATGTATAAACCACAGAGTAGAGCAGTACACTACCAGCAG
GCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAA
ATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCGGGTA
TTGCCCTGAGATGGGATCATTTTTACTGGCAAAAAAAAAAAAAAAAA

consensusID : consensus_13574#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 755
fasta sequence

                              [ACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGAGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGTGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGAACTCCGCCATTTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCA-CAGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTACTGGCAATGTTGAGAATGTGAG-ACGGTTTGGTAATATGGCATCAGCAAT]

[-] EMBL CB661346             [ACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGAGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGTGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGAACTCCGCCATTTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTATTGGGTGGTCACCGGCGTGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTTCAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCA CAGAGTAGAGCAGTACCCTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTTCTGGCAATGTTGAGAATGTGAG t                          ]
[-] EMBL CB655256             [                              CCGTTCGTCGTGTCACGCAAGTGGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCA CAGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTACTGGCAATGTTGAGAATGTTAG AAGGGTTc                   ]
[-] EMBL CB637611             [                                                                                                                                                                                          CCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCTTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCA CAGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTACTGGCAATGTTGAGAATGTGAG ACGGTTTGGTAATATGGCATCAGCAAT]
[+] EMBL BM038385             [                                                                                                                                                                                                                                                           CGCCGACTTGCCGGGGTACTGGGTGGTCACCGGC CGAAGCTCTGCATCGAA GCCGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTTGTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCACCAGAGTAGAGCAGTACACTACCAGCAGGCCATTGTTTTGGTTTGCACTTGGATTCTAGC AAACTAGGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCAT CAGCTC AAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTACTGCCATNCNTGAGAATGTGAGCACGGTTTGGTAAaaaaa          ]




>consensus_13574#2
ACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTCGAGTCACGCAAGTCGGGCTCG
CTGTCGGCATTGTTCAGTGCGCGGCTGTCCGCCGCCGGTGCCGGTGGCTCCGCGCAGATG
ATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGGTGAACTCCGCCATTTTCCCCAAG
GGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGAGGTACGTCGACACAACGGAGGTG
ATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGGTCACCGGCGCGAAGCTCTGCATC
GAAGGCGGCAAAGTTGCACTCAAGGTCAAGTACTCGCTGCTCATCGCGGAGGTGCTAGAC
TACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGTGTGCATCTTTTTGGCTCGTTTGTG
ATGCTGTTGTGTACAGTACAGTACAGTACAGGTAAGGTCGGCTCAGCTCAGCGTATACTT
GTACAGATTGGGCACACGCTAGTAGTCAGGTATACTATTTGTATGTATAAACCACAGAGT
AGAGCAGTACACTACCAGCAGGCAATTGTTTTGGTTTGCACTTGGATTCTAGCAAAACTA
GGAGCATACACAGTTGTTGAAATTGGTTTCCTTAGGCATGCAGCTCAAAAGGTTATGTAC
GATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTTTTACTGGCAATGTTGAG
AATGTGAGACGGTTTGGTAATATGGCATCAGCAAT

consensusID : consensus_13574#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 396
fasta sequence

                              [TNGNTNGACAGGGNAGNTTNGNATTGGGTCCTGGATCTNCTGCTTGGCGGTCGTTCAGACCATCAGTCGTGTCACACAAAGATGTAAGGCAATCACACATGTACTGACGATGTTCATTGCGTGATTTATCACTCCAACAGCAGGAAATTAATGAGAGAGCCATGATTAATTTGTTTGGTCGCATGTCCTTTCGTTTCACAGGACATCCTCAGTATCCACATCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCGGTTCACCGGACGTCATCTCTATGGCTTTTGTGCCGATTACTTCTCTGCTCACTGGTGTTCGAGGCTGCGGGTTNCTGAATCATGCAGTGAACCTCTACCTCAGATGTAAGCACTTT]

[+] EMBL OSS14574A            [TNGNTNGACAGGGNAGNTTNGNATTGGGTCCTGGATCTNCTGCTTGGCGGTCGTTCAGACCATCAGTCGTGTCACACAAAGATGTAAGGCAATCACACATGTACTGACGATGTTCATTGCGTGATTTATCACTCCAACAGCAGGAAATTAATGAGAGAGCCATGATTAATTTGTTTGGTCGCATGTCCTTTCGTTTCACAGGACATCCTCAGTATCCACATCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCGGTTCACCGGACGTCATCTCTATGGCTTTTGTGCCGATTACTTCTCTGCTCACTGGTGTTCGAGGCTGCGGGTTNCTGAATCATGCAGTGAACCTCTACCTCAGATGTAAGCACTTT]




>consensus_13574#3
TNGNTNGACAGGGNAGNTTNGNATTGGGTCCTGGATCTNCTGCTTGGCGGTCGTTCAGAC
CATCAGTCGTGTCACACAAAGATGTAAGGCAATCACACATGTACTGACGATGTTCATTGC
GTGATTTATCACTCCAACAGCAGGAAATTAATGAGAGAGCCATGATTAATTTGTTTGGTC
GCATGTCCTTTCGTTTCACAGGACATCCTCAGTATCCACATCAGAAGAGGGGGCGTTGAT
AATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCGGTTCACCGGACGTCATCTCT
ATGGCTTTTGTGCCGATTACTTCTCTGCTCACTGGTGTTCGAGGCTGCGGGTTNCTGAAT
CATGCAGTGAACCTCTACCTCAGATGTAAGCACTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      CGGCGCAGGCTGCGGCGGAGGCGGCGGTGGGCGCGATCGGGTGCGGGTACGACCTCACGA 60
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GCGACCTCCGCCTCAGCCGCGTCAAGGCGGGCGGGAGGCTGGTGGACATCGACGGGGCGA 120
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GCGGCGCGGCGAGACGGGAGCTGGTCCTCCCCTGGGGAGCCGTCGTGGGGGGCGTGCCGG 180
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      TGGGGATCGTCGCCGACAAGGGGGAGCGCACCCGGTTCCGCTCCGACGTCCTCTCCTTCG 240
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      CTCAGATGGCGGAGCAGGTGAACCAGACGATGTCGGTGGCGGGGAAGATCCCGTCGGGCG 300
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      CGTTCAACGCCATGTTCGACTATCACGGGTGCTGGCACAAGGACGCGGCCGCCACGGGGA 360
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GCCTCTGCTTCGACGGCCGCTTCATCGAGCTCTACGCCGTCGAGGCCCCCCGCGCGCACC 420
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      TCGCCCTGCTCGACCGCGTCAAGCGCGACGTCCCGCCCTTCTGGGACCCCGCTGCTCTCG 480
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      CCGAATTCATCGACAAGTACGGGACGCACGTCATCGCCGGGGTGAAGATGGGAGGGAAGG 540
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      ATGTGGTCTGCATCAAGCAGCTCAAGGGATCCAATCTCACACAGAGCGATGTGCAGTCTC 600
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GGCTCAAGAAACTCTCCGACGACAAGCTCGCTCAGGATTCACCTGAAAGTTTAACTGCAA 660
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GAGACGACAAGTTCTTGCTGGGATTAAACGGGAGTTTATTATTGGGTCCTGGATCTGCTG 720
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      CTTGGCGGTCGTTCAGACCATCAGTCGTGTCACACAAAGATGACATCCTCAGTATCCACA 780
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      TCAGAAGAGGGGGCGTTGATAATGGCCAAGGCCACAGTAATTGGCTTTCGACGATCAGCG 840
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GTTCACCGGACGTCATCTCTATGGCTTTTGTGCCGATTACTTCTCTGCTCACTGGTGTTC 900
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GAGGCTGCGGGTTCCTGAATCATGCAGTGAACCTCTACCTCAGATACAAACCTCCAATAG 960
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ------------------------------------------------------------
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      AGGAACTCCATCAATTTCTGGAATTCCAGGTGCCACGACAATGGGCTCCAGAGTTTGGGG 1020
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      -----------------------------------------TCCATGTTGTTTGTAGTAG 19
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      AGCTCCCTCTGGCTTTGGGCCCGAGAAAGAAGAAGAACAGCCTGCCATCTCTTCAGTTTA 1080
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      AACTAGCTCACAGTGTGTTCCGTTTTGTTTC-GTGCAGGCTGATTCTGGGAATCGTCCGG 78
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      CTCTCATGGGTCCTAAGCTTCATGTCACCACTGCCAAGGCTGATTCTGGGAATCGTCCGG 1140
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      TGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTAC 138
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      TGACCGGCATTCGGCTGTTCCTGGAAGGCAAGAAGAACAACCGGCTGGGCGTTCACCTAC 1200
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      AGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCNGGCGAGGTGGCGTCGGCGGAG 198
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      AGCATTTGTCAGCGACGCCGGGCACGATCACGATCGCCGG-CGAGGTGGCGTCGGCGGAG 1259
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      GACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCAC 258
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GACGCCACCGTGAGGGAGCGCGACTACATCGAGCCCATCAAGTCGCCGCTGCTGTCGCAC 1319
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      GTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTG 318
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      GTGTGCACGGCGCCGGTGCAGTACAACGGCGCGCGGATCGACGACTGCGCGGCGATCGTG 1379
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      ACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTG 378
consensus_13574#2      ------------------------------------------------------------
consensus_13574#0      ACGAGGGCGTGGCTGGAGGTGCAGGAGACGTGCCTCAAGAAGGTGCTCTTCCTGCGGCTG 1439
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      GGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTC 438
consensus_13574#2      ---------------------ACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTC 39
consensus_13574#0      GGCTTCTCCGGCGTGGCATCCACCAAGATCCGGCGGTCGGAGTGGGATGGCCCGTTCGTC 1499
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      GTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGT 498
consensus_13574#2      GAGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGTGCGCGGCTGTCCGCCGCCGGT 99
consensus_13574#0      GTGTCACGCAAGTCGGGCTCGCTGTCGGCATTGTTCAGCGCGCGGCTGTCCGCCGCCGGT 1559
consensus_13574#3      ------------------------------TNGNTNGACAGG-GNAGNTTNGNATTGGGT 29
                                                     * * *      * *    *  *     ***

consensus_13574#1      GCCGGTGGCTCCGCGCAG--ATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGG 556
consensus_13574#2      GCCGGTGGCTCCGCGCAG--ATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGG 157
consensus_13574#0      GCCGGTGGCTCCGCGCAG--ATGATGCAGCAGCAGCAGCCGGTGGGGGAGAAGGTGGAGG 1617
consensus_13574#3      CCTGGATCTNCTGCTTGGCGGTCGTTCAG-ACCATCAGTCGTGTCACACAAAGATGTAAG 88
                        * **     * **   *   *  * *** * ** *** **         *** ** * *

consensus_13574#1      TGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGA 616
consensus_13574#2      TGAACTCCGCCATTTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGA 217
consensus_13574#0      TGAACTCCGCCATCTTCCCCAAGGGCCCGCCGGTGCCTCTCCCGGTGCAGAGGATGGCGA 1677
consensus_13574#3      GCAATCACAC-ATGTACTGACGATGTTCATTGCGTGATTTATCACTCCAACAGCAGGAAA 147
                         **   * * ** * *       *  *   *     * *  *  * **   *  **  *

consensus_13574#1      GGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGG 676
consensus_13574#2      GGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGG 277
consensus_13574#0      GGTACGTCGACACAACGGAGGTGATGAGGGGCCCCGCCGACTTGCCGGGGTACTGGGTGG 1737
consensus_13574#3      TTAATGAGAGAGCCATGATTAATTTGTTTGGTCGCAT-GTCCTTTCGTTTCACAGGACA- 205
                          * *      * * *       **   ** * *   * * *  **    ** **    

consensus_13574#1      TCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCA-AGTACTCG 735
consensus_13574#2      TCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCA-AGTACTCG 336
consensus_13574#0      TCACCGGCGCGAAGCTCTGCATCGAAGGCGGCAAAGTTGCACTCAAGGTCA-AGTACTCG 1796
consensus_13574#3      TCCTCAGTATCCACATCAGAAGAGGGGGCGTTGA--TAATGGCCAAGGCCACAGTAATTG 263
                       **  * *     *  ** * *  *  ****   *  *      ***** ** **** * *

consensus_13574#1      CTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGT 795
consensus_13574#2      CTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGT 396
consensus_13574#0      CTGCTCATCGCGGAGGTGCTAGACTACCCTGAGTGACTGTTGAGAAGAACTGCACGGTGT 1856
consensus_13574#3      GCTTTCGACGATCAG----CGGTTCACCGGACGTCATCTCT---ATGGCTTTTGTGCCGA 316
                           **  **   **      *   ***    ** *    *   * *   *    *  * 

consensus_13574#1      GTGCATCTTT-TTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGG-TA 853
consensus_13574#2      GTGCATCTTT-TTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGG-TA 454
consensus_13574#0      GTGCATCTTT-TTGGCTCGTTTGTGATGCTGTTGTGTACAGTACAGTACAGTACAGGATG 1915
consensus_13574#3      TTACTTCTCTGCTCACTGGTGTTCGAGGCTGCGGGTTNCTGAATCATGCAGTGAACCTCT 376
                        * * *** *  *  ** ** *  ** ****  *  * * * *   * ****  *     

consensus_13574#1      AGGTCGGCTCAGCTCAGCGT----------ATACTTGTAC-------------------- 883
consensus_13574#2      AGGTCGGCTCAGCTCAGCGT----------ATACTTGTAC-------------------- 484
consensus_13574#0      TAACTGGTTCAATGGAAGGAGAGAGAGAAGACACCGGCATGGTTGAGGGTCGAAGAGGAG 1975
consensus_13574#3      ACCTCAGATGTAAGCACTTT---------------------------------------- 396
                             * *      *                                            

consensus_13574#1      ---AGATTGGGCACACG----CTAGTAGTCAG-GTAT-ACTATTTGTATGTATAAACCAC 934
consensus_13574#2      ---AGATTGGGCACACG----CTAGTAGTCAG-GTAT-ACTATTTGTATGTATAAACCAC 535
consensus_13574#0      ACGAGATCGTCCAATCGATGGCTAGTTGCAAGCGCATGATTAGTTATTTATGTAGTTCAC 2035
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      AGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTT-----TGGTTTGCACTTGGATTC- 988
consensus_13574#2      AGAGTAGAGCAGTACACTACCAGCAGGCAATTGTTT-----TGGTTTGCACTTGGATTC- 589
consensus_13574#0      AAATTTGTTGAATAAGGGGTTGAATCGAGATCTCCTATATGTTTTTTGTTCTAGGGTTTG 2095
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      --TAGCAAAACTAGGAGCATACACAGTTGTTGAAA--TTGGTTTCCTTAGGCATGCAGC- 1043
consensus_13574#2      --TAGCAAAACTAGGAGCATACACAGTTGTTGAAA--TTGGTTTCCTTAGGCATGCAGC- 644
consensus_13574#0      AATGGTGCACCCACAAGGAGACACGGTCGTGGAATATTTCATCTTTCTAGGAATAAATCG 2155
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      -TCAAAAGGTTATGTACGATTATTTCTCACCTCGGGTATTGCCCTGAGATGGGATCATTT 1102
consensus_13574#2      -TCAAAAGGTTATGTACGATTATTTCTCACCTCTGGTATTGCCCTGAGATGGGATCATTT 703
consensus_13574#0      ATAAAATGTGTAACTTAAATCGATGCAAATCTTCGGTGATATTTTAACC---AATCATGT 2212
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      TTACTGGCAAAAAAAAAAAAAAAAA----------------------------------- 1127
consensus_13574#2      TTACTGGCAATGTTGAGAATGTGAGACGGTTTGGTAATATGGCATCAGCAAT-------- 755
consensus_13574#0      TTGTGAAACACAATATAAATCTCTTCTTGTAAAACAAAATATATATCTCAAAAGAAATAA 2272
consensus_13574#3      ------------------------------------------------------------
                                                                                   

consensus_13574#1      -------
consensus_13574#2      -------
consensus_13574#0      AGGGAGG 2279
consensus_13574#3      -------