cluster # 13589

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Oryza sativa
cluster # 13589 cluster # 13589 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13589#0 length = 1127 sequences # 9
consensus_13589#1 length = 686 sequences # 2

consensus_13589#2 length = 597 sequences # 1
consensus_13589#3 length = 414 sequences # 1

consensusID : consensus_13589#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1127
fasta sequence

                              [GGAGTAGAAAGTTTTTCTCTCTCTCCCCTCTCCCACCGGCAGAGACGCGCTCCTGTGGCGGGGAGGGAGCAGATTCATTCAGCCACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCA-CCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGT-GGTTAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAG-GCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATG-TGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTCAAAACCTCTCTTAACATAAACAAAACACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGTGAGTGCTTCAAAAATTAATTGTTCAAAAAAAAAAAAA]

[+] EMBL CF280584             [GGAGTAGAAAGTTTTTCTCTCTCTCCCCTCTCCCACCGGCAGAGACGCGCTCCTGTGGCGGGGAGGGAGCAGATTCATTCAGCCACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGTCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF281063             [                  CTCTCTCCCCTCTCCCACCGGCAGAGACGCGCTCCTGTGGCGGGGAGGGAGCAGATTCATTCAGCCACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTCAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCA CCATACTGGAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF297848             [                                             CGCGCTCCTGTGGCGGGGAGGGAGCAGATTCATTCAGCCACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCA CCATACTGGAGTGAAGAGAGAAAGAAAGAGGTTCCAAATGCTGAGGTGGGTTAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK066994             [                                                                                              AACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCA CCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGT GGTTAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAG GCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATG TGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTCAAAACCTCTCTTAACATAAACAAAACACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGTGAGT                                 ]
[-] EMBL CB621474             [                                                                                                                                                                                                                                                                             CTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCA CCATACTGGAGTGAAGAGAGAAATAAGGAGGTTCCAAATGCTGAGGT GGTTAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAG GCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATG TGCACAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTCAAAACCTTTCTTAACATAAACAAAACACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGT                                     ]
[-] EMBL CF297849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGATGGATTCATTCACCCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGT GGTTAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAG GCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATG TGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTCAAAACCTCTCTTAACATAAACAAAACACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGTGAGTGCTTCAAAAA                       ]
[+] EMBL BE230055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 atATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGAGAGGTGAAACTGAATGTAGCGCAAGCTGGACAGTGACTGTGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGAGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATGTTGCACAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTCAAAACCTTTCTTAACATAAACAAAACACATTTATAGTA ATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCT                                       ]
[+] EMBL BQ906007             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATCTTGACAGCGAGGTGAAACTGAATGTAG GCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCCAAAGTTTTGGGGTAC ATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATG TGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTC AAACCTCTCTTAACATAAAC AAACACATTTATAGTAGATGGATTA CCTCAGCATGTTA TTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAAC AATATATCAGATACCTGAATTTCTGTGAGTGCTTC AACGTTAATTGTTCAAAAAA       ]
[-] EMBL CF281064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGATTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTTTGCTCTACGTTAATG TGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATTTAAAAATCGGTTACTCAAAACCTTTTTTAACATAACCAAAACCCATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATTTTGAACAGCACCTTTTCCATACTATTTGTATCAGGGAGGTAAAAACAAATATATCAGATCCCTGAATTTTTGTGAGTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13589#0
GGAGTAGAAAGTTTTTCTCTCTCTCCCCTCTCCCACCGGCAGAGACGCGCTCCTGTGGCG
GGGAGGGAGCAGATTCATTCAGCCACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAG
CAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGC
GCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAAC
TGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAA
TGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATT
TGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGC
TCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACT
AACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATG
GATTCATTCACCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGTGGT
TAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATT
GCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGT
AGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAG
GAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCAC
CCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATGTGCAGAACTTACAGTTGAAT
TATAGGTTCCCAGCTATTTGTCTATTTCTATATCGGTTACTCAAAACCTCTCTTAACATA
AACAAAACACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCTTG
AACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCT
GAATTTCTGTGAGTGCTTCAAAAATTAATTGTTCAAAAAAAAAAAAA

consensusID : consensus_13589#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 686
fasta sequence

                              [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCACCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGTGGTTANTGGAGTACTGAACTACATTANAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCANAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAGGCAAGCTG]

[+] EMBL CF294264             [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCACCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGTGGTTANTGGAGTACTGAACTACATTANAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCANAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAGGCAAGCTG]
[+] EMBL CA762307             [                                              ACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATG                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_13589#1
CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACACAGACACAACTCGTCTT
CTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAG
GCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCAT
CATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATC
TCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCC
AGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACAT
TCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAG
AAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGA
AGAAGGCATTTGGATGGATTCATTCACCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTC
CAAATGCTGAGGTGGTTANTGGAGTACTGAACTACATTANAACTCTTGGGCTCTCCGATG
ATGACCTTCGCAAATTGCTGAAGAAATTCCCANAAGTACTTGGATGTGATCTTGACAGCG
AGGTGAAACTGAATGTAGGCAAGCTG

consensusID : consensus_13589#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence

                              [TGCAGGATTCCGCACTAGCTCTTGGGCTCTCCGATGATGACTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGANGTGAAACTGAATGTNGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCNGAGTCTCTTTTAAGGAATCCNAAAGTTTTGGGGTNCAATGTGGACTGCCGANGGGACTGCATGGCGCANTGCACCCGTTGCTGGGTTAGGTTCTAATTCTGCTCTACGTTAATGTGCAGAACTTACAGTTGAATTATAGGTTCCCNGCTATTTGTCTATTTCTATATCGGTTACTCNAAACCTCTCTTAACATTNNCAAAACACATTTNTAGTNNATGGATTAGCCTCCNCNTGTTNGTTTTGTTTACATCTTGAACAGCACCTTTTCCNTACTATCTGTNTCNNGGATGTTNAAACAAATATATCCNATACCTGAATTTCTGTGAGTGCTTCNNCGTTTAATTGTTCTTTTCNTTTGGTCTGTTGAAGCNATGAAAATACTTGAATTGTGCTGTTCTGCCANTCTTGTCATTGTGCTTGATATATAATCCCTATCTCCNA]

[+] EMBL BE228378             [TGCAGGATTCCGCACTAGCTCTTGGGCTCTCCGATGATGACTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGANGTGAAACTGAATGTNGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCNGAGTCTCTTTTAAGGAATCCNAAAGTTTTGGGGTNCAATGTGGACTGCCGANGGGACTGCATGGCGCANTGCACCCGTTGCTGGGTTAGGTTCTAATTCTGCTCTACGTTAATGTGCAGAACTTACAGTTGAATTATAGGTTCCCNGCTATTTGTCTATTTCTATATCGGTTACTCNAAACCTCTCTTAACATTNNCAAAACACATTTNTAGTNNATGGATTAGCCTCCNCNTGTTNGTTTTGTTTACATCTTGAACAGCACCTTTTCCNTACTATCTGTNTCNNGGATGTTNAAACAAATATATCCNATACCTGAATTTCTGTGAGTGCTTCNNCGTTTAATTGTTCTTTTCNTTTGGTCTGTTGAAGCNATGAAAATACTTGAATTGTGCTGTTCTGCCANTCTTGTCATTGTGCTTGATATATAATCCCTATCTCCNA]




>consensus_13589#2
TGCAGGATTCCGCACTAGCTCTTGGGCTCTCCGATGATGACTTCGCAAATTGCTGAAGAA
ATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGANGTGAAACTGAATGTNGGCAAGCT
GGACAGTGACTGGGGAATAAATGGAAAAACACTCCNGAGTCTCTTTTAAGGAATCCNAAA
GTTTTGGGGTNCAATGTGGACTGCCGANGGGACTGCATGGCGCANTGCACCCGTTGCTGG
GTTAGGTTCTAATTCTGCTCTACGTTAATGTGCAGAACTTACAGTTGAATTATAGGTTCC
CNGCTATTTGTCTATTTCTATATCGGTTACTCNAAACCTCTCTTAACATTNNCAAAACAC
ATTTNTAGTNNATGGATTAGCCTCCNCNTGTTNGTTTTGTTTACATCTTGAACAGCACCT
TTTCCNTACTATCTGTNTCNNGGATGTTNAAACAAATATATCCNATACCTGAATTTCTGT
GAGTGCTTCNNCGTTTAATTGTTCTTTTCNTTTGGTCTGTTGAAGCNATGAAAATACTTG
AATTGTGCTGTTCTGCCANTCTTGTCATTGTGCTTGATATATAATCCCTATCTCCNA

consensusID : consensus_13589#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence

                              [AACTGAATGTAGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATGTGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTAAATTTCTATATCGGTTACTCAAAACCTCTCTTAACATAAACAAAAAACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCATGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGTGAGTGCTTCAAAGTTTAATTGTTCTTTTCAAAAA]

[-] EMBL CF294265             [AACTGAATGTAGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATGTGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTAAATTTCTATATCGGTTACTCAAAACCTCTCTTAACATAAACAAAAAACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGTTTACATCATGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGTGAGTGCTTCAAAGTTTAATTGTTCTTTTCAAAAA]




>consensus_13589#3
AACTGAATGTAGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTC
TTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGG
CGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCTGCTCTACGTTAATGTGCAGAACTT
ACAGTTGAATTATAGGTTCCCAGCTATTTGTAAATTTCTATATCGGTTACTCAAAACCTC
TCTTAACATAAACAAAAAACATTTATAGTAGATGGATTAGCCTCAGCATGTTAGTTTTGT
TTACATCATGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAATATA
TCAGATACCTGAATTTCTGTGAGTGCTTCAAAGTTTAATTGTTCTTTTCAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      GGAGTAGAAAGTTTTTCTCTCTCTCCCCTCTCCCACCGGCAGAGACGCGCTCCTGTGGCG 60
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      GGGAGGGAGCAGATTCATTCAGCCACACAGACACAACTCGTCTTCTCCTCGAGGAGCTAG 120
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      CAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGC 180
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      GCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCATTGCCTTTCTTAAC 240
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      TGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAA 300
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      TGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGCCAAACATTGAATT 360
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      TGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTCTCCGCTGATCAAGC 420
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      TCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAGAAGCCAAACAGATACT 480
consensus_13589#1      ------------------------------------------------------------
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      AACATCACTGGATTACTCCATTGAAGACGCCGACAAAATGCTGAAGAAGGCATTTGGATG 540
consensus_13589#1      --------------------------------------------------------CGAA 4
                                                                                   

consensus_13589#2      ------------------------------------------------------------
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      GATTCATTCACCATACTGGAGTGAAGAGAGAAAGAAGGAGGTTCCAAATGCTGAGGTGGT 600
consensus_13589#1      TTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACACAGACACAACTCGTCTTCTCC 64
                                                                                   

consensus_13589#2      --------TGCAGGATTCCGCACTAGCTCTTGGGCTCTCCGATGATGAC-TTCGCAAATT 51
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      TAGTGGAGTACTGAACTACATTAGAACTCTTGGGCTCTCCGATGATGACCTTCGCAAATT 660
consensus_13589#1      TCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAAGCCTTCAGGAA-TCAGGAGGCG 123
                                                                                   

consensus_13589#2      GCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGANGTGAAACTGAATGT 111
consensus_13589#3      --------------------------------------------------AACTGAATGT 10
consensus_13589#0      GCTGAAGAAATTCCCAGAAGTACTTGGATGTGATCTTGACAGCGAGGTGAAACTGAATGT 720
consensus_13589#1      GCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGATGTTGGCGAAATCCCCATCAT 183
                                                                           *  *   *

consensus_13589#2      NGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCNGAGTCT-----CTTT 166
consensus_13589#3      AGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCT----TCTTT 66
consensus_13589#0      AGGCAAGCTGGACAGTGACTGGGGAATAAATGGAAAAACACTCCGGAGTCT----TCTTT 776
consensus_13589#1      TGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCCTCTCTCCAAGCTGTGATCTCT 243
                        * *   **  ** *  ****          *   *  * ***   *  **     ** *

consensus_13589#2      TAAGGAATCCNAAAGTTTTGGGGTNCAATGTGGACTGCCGANGGGACTGCATGGCGCANT 226
consensus_13589#3      TAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGT 126
consensus_13589#0      TAAGGAATCCAAAAGTTTTGGGGTACAATGTGGACTGCCGAGGGGACTGCATGGCGCAGT 836
consensus_13589#1      TTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATGGAGGAAGATTAACTATCCAGC 303
                       * **    ** ** *        * ***   * * *   ** *    *  *     **  

consensus_13589#2      GCACCCGTTG--CTGGGTTAGGTTCTAATT--CTGCTCTACGTTAATGTGCAGAACTTAC 282
consensus_13589#3      GCACCCGTTG--CTGGGTTAGGTTCTAGTT--CTGCTCTACGTTAATGTGCAGAACTTAC 182
consensus_13589#0      GCACCCGTTG--CTGGGTTAGGTTCTAGTT--CTGCTCTACGTTAATGTGCAGAACTTAC 892
consensus_13589#1      -CAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTCAGAGAAAATGGAGGACATTC 362
                        **  * ***   * **  *   ** *  *    *  **  *  **  ** ** ** * *

consensus_13589#2      AGTTGAATTATAGGTTCCCNGCTAT--TTGTCTATTTCTATATCGGTTA--CTCNAAACC 338
consensus_13589#3      AGTTGAATTATAGGTTCCCAGCTAT--TTGTAAATTTCTATATCGGTTA--CTCAAAACC 238
consensus_13589#0      AGTTGAATTATAGGTTCCCAGCTAT--TTGTCTATTTCTATATCGGTTA--CTCAAAACC 948
consensus_13589#1      --TCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTGACAACAAAACATGGGAAG 420
                         *    * **      *  ****   ****  **     *  *    *  *     *  

consensus_13589#2      TCTCTTAACATTNNCAAAACACATTTN--TAGTNNATGGATTAGCCTCCNCNTGTTNGTT 396
consensus_13589#3      TCTCTTAACATAAACAAAAAACATTTA--TAGTAGATGGATTAGCCTCAGCATGTTAGTT 296
consensus_13589#0      TCTCTTAACATAAACAAAACACATTTA--TAGTAGATGGATTAGCCTCAGCATGTTAGTT 1006
consensus_13589#1      AAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAGA-CGCCGACAAAATGCTG 479
                          *  ****    * **   ** *    ** *  ** **  * *  *  *    *  * 

consensus_13589#2      TTGTTTACATCTTGAACAGCACCTTTTCCNTACTATCTGTNTCNNGGATGTTNAAACAAA 456
consensus_13589#3      TTGTTTACATCATGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAA 356
consensus_13589#0      TTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGTATCAGGGATGTAAAAACAAA 1066
consensus_13589#1      AAGAAGGCATTTGGATGGATTCATTCACCATACT----GGAGTGAAGAGAGAAAGAAGGA 535
                         *    ***   **      * **  ** ****    *       **     * *   *

consensus_13589#2      TATATCCNATACCTGAATTTCTGTGAGTGCTTCNNCGTTTAATTGTTCTTTTCNTTTGGT 516
consensus_13589#3      TATATCAGATACCTGAATTTCTGTGAGTGCTTCAAAGTTTAATTGTTCTTTTCAAAAA-- 414
consensus_13589#0      TATATCAGATACCTGAATTTCTGTGAGTGCTTCAAAAATTAATTGTTCAAAAAAAAAAAA 1126
consensus_13589#1      GGTTCCAAATGCTGAGGTGGTTANTGGAG-TACTGAACTACATTANAACTCTTGGGCTCT 594
                         *  *  ** *     *   *    * * * *     *  ***                

consensus_13589#2      CTGTTGAAGCNATGAAAATACTTGAATTGTGCTGTTCTGCCANTCTTGTCATTGTGCTTG 576
consensus_13589#3      ------------------------------------------------------------
consensus_13589#0      A----------------------------------------------------------- 1127
consensus_13589#1      CCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCANAAGTACTTGGATGTGATCTTG 654
                                                                                   

consensus_13589#2      ATATATAATCCCTATCTCCNA----------- 597
consensus_13589#3      --------------------------------
consensus_13589#0      --------------------------------
consensus_13589#1      ACAGCGAGGTGAAACTGAATGTAGGCAAGCTG 686