cluster # 13590

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Oryza sativa
cluster # 13590 cluster # 13590 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13590#0 length = 1206 sequences # 11

consensus_13590#1 length = 674 sequences # 1
consensus_13590#2 length = 528 sequences # 1

consensusID : consensus_13590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1206
fasta sequence

                              [CGCATCTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTGAAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTACACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTAGCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCAATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTGGGTGGGAAAATTGACCCTGCTCTTTTTGAAGTCCTCTATGCTTCTCAGCATGCTATCTTCTTCTTTGCTAGGCTTCCACAGATATGGAAGAATTTTATGAACAAGGGCACTGGCGAGCTGAGCTTTCTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCACCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTC-AGATAGTGTTGTACCAGAAGCCTGCTCCAA-AGAAAGAGAAGAAGAG-AGATTGAGCACA-ACTGCACAACACA-AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA-CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTTATTTTTCAGGCATAAATATTGTAAGCACGGGGCTACATACAAAATCCAGAAAGTTGTTTCTCAAAAAAAAAAA]

[+] EMBL CF313029             [CGCATCTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTGAAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTACACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTAGCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCAATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTGGGTGGGAAAATTGACCCTGCTC TTTTGAAGTCCTCTATGCTTCTCAGCATGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF331958             [        CCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTGAAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTACACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTAGCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTCACTATTACTCCCCACCAATGGGAACCAAGACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF315406             [           ACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTGAAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTACACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTAGCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCAATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTGGGTGGGAAAATTGACCCTGCTCTTTTTGAAGTCCTCTATGCTTCTCAGCATGCTATCTTCTTCTTTGCTAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK058326             [            CCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTGAAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTACACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTAGCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCAATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTGGGTGGGAAAATTGACCCTGCTCTTTTTGAAGTCCTCTATGCTTCTCAGCATGCTATCTTCTTCTTTGCTAGGCTTCCACAGATATGGAAGAATTTTATGAACAAGGGCACTGGCGAGCTGAGCTTTCTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCACCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTC AGATAGTGTTGTACCAGAAGCCTGCTCCAA AGAAAGAGAAGAAGAG AGATTGAGCACA ACTGCACAACACA AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTTATTTTTCAGGCATAAATATTGTAAGCACGGGGCTACATACAAAATCCAGAAA                     ]
[+] EMBL AU057476             [                              CCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGG GAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACNCCATCGTCGCCGCCTCCACNACCGTCAAGCTCCCTCAGATATTAAAGATTTTGAAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTACACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTAGCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCAATGGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA755239             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCAATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTGGGTGGGAAAATTGACCCTGCTCTTTTTGAAGTCCTCTATGCTTCTCAGCATGCTATCTTCTTCTTTGCTAGGCTTCCACAGATATGGAAGAATTTTATGAACAAGGGCACTGGCGAGCTGAGCTTTCTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCACCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTC AGATAGTGTTGTACCAGAAGCCTGCTCCNA AGAAAGAGAAGAAGAG AGATTGAGCACA ACTGCACAACACA AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGNTAGATTATTGTTAGA                                                                                                                                                           ]
[+] EMBL BI795098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATCTTCTTCTTTGCTAGGCTTCCACAGATATGGAAGAATTTTATGAACAAGGGCACTGGCGAGCTGAGCTTTCTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCACCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTC AGATAGTGTTGTACCAGAAGCCTGCTCCAA AGAAAGAGAAGAAGAG AGATTGAGCACA ACTGCACAACACA AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGC AAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTAaaaa                                                                                                   ]
[-] EMBL CF331957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AACTTTGCTGGTTCCATAGTAAGAGTGTTCACCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTC AGATAGTGTTGTACCAGAAGCCTGCTCCAA AGAAAGAGAAGAAGAG AGATTGAGCACA ACTGCACAACACA AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTCATTTTTCAGGCATAAATATTGTAAGCACGGGGCTACATACAAAATCCAGAAAGTTGTTTCTCAAAAAAAAAAA]
[+] EMBL AU057477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTC AGATAGTGTTGTNCCAGAANCCTGCTCCAA AGAAAGNGAAGAAGNG AGATTGAGCACA ACTGCACAACACA AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTTAaaaaa                                                                   ]
[+] EMBL BI796472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGTGATGAATGGTACGCTCTTGGGTCTAGATAGTGTTGTACCAGAAGCCTGCTCCAAGAGATAGAGAAGAAGAGTAGATTGAGCACATACTGCACAACACATAGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGC AAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGATCTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTTATTTTTCAGGCATAAATATTGTAAGCACGGGGCTACATAC AAATCCAGAAAGTTGTTTCTCAAAAAAA    ]
[-] EMBL BI305928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAGAAGCCTGCTCCAA AGAAAGAGAAGAAGAG AGATTGAGCACA ACTGCACAACACA AGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACGATGGGCACCATATACAGA CTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAAGTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTTATTTTTCAGGCATAAATATTGTAAGCACGGGGCTACATACAAAATCCAGAAAG                    ]




>consensus_13590#0
CGCATCTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAA
TCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCA
GCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCG
CTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTC
GGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTG
AAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTAC
ACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTA
GCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCA
ATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTG
GGTGGGAAAATTGACCCTGCTCTTTTTGAAGTCCTCTATGCTTCTCAGCATGCTATCTTC
TTCTTTGCTAGGCTTCCACAGATATGGAAGAATTTTATGAACAAGGGCACTGGCGAGCTG
AGCTTTCTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCACCAGCATC
CAGGAGAAGACTCCCTTAAGTGTGATACTGGGATCTGCAATTGGCATTGTGATGAATGGT
ACGCTCTTGGGTCAGATAGTGTTGTACCAGAAGCCTGCTCCAAAGAAAGAGAAGAAGAGA
GATTGAGCACAACTGCACAACACAAGAAAAGGCAGAATGTTCATCTCTGTGTCCATCTTC
AGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTGCAGAGTCGTGTGATGATGAAAAACG
ATGGGCACCATATACAGACTAGATATGGATATCTTGCGTACTTAGTTTTAGCATTTAGAA
GTGTCATGACTGATGTTAGATTATTGTTAGATTGCTGTACTGTGCAAGCTACTGACAGTG
GAAAAACTGTTCTCTTAACTCTATGTTTGAGACTATTTTTTTATCGTCTGTTTATTTTTC
AGGCATAAATATTGTAAGCACGGGGCTACATACAAAATCCAGAAAGTTGTTTCTCAAAAA
AAAAAA

consensusID : consensus_13590#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence

                              [CGGAACAAACTTTGAGTTCAAAAACATGGCGCAACGTTCTCCATTCCACACCCAAAAAAGAAAAAAAAAACATCTTTCCAAATTTATGTTCCTCACGCAATTTCTCGGTTTAAACTTACTCTCCCTTTCCCTAATCCCTCTCTTGTGCCCAAAGAGGCCCAAAGGCCACACAGCCCAAAGCCTACATGACAACACGAGGCCCACGCAACCGCGCGTTGGTGGGTTCGGCCCAACACGTCACGCATCTGGGCTTTCCTTCCTCCTCCTCCCAGCCACAGGCAGCTGACGTCACGGACGCATCTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGGTTTTTCTCCCATCCTCTCCCCCACCACACACACACAATTCGCCATATGCGCCCAACGATGAGATGTGATGAGATGAGATGCGTGCGCTTGCTT]

[-] EMBL AK108177             [CGGAACAAACTTTGAGTTCAAAAACATGGCGCAACGTTCTCCATTCCACACCCAAAAAAGAAAAAAAAAACATCTTTCCAAATTTATGTTCCTCACGCAATTTCTCGGTTTAAACTTACTCTCCCTTTCCCTAATCCCTCTCTTGTGCCCAAAGAGGCCCAAAGGCCACACAGCCCAAAGCCTACATGACAACACGAGGCCCACGCAACCGCGCGTTGGTGGGTTCGGCCCAACACGTCACGCATCTGGGCTTTCCTTCCTCCTCCTCCCAGCCACAGGCAGCTGACGTCACGGACGCATCTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGGTTTTTCTCCCATCCTCTCCCCCACCACACACACACAATTCGCCATATGCGCCCAACGATGAGATGTGATGAGATGAGATGCGTGCGCTTGCTT]




>consensus_13590#1
CGGAACAAACTTTGAGTTCAAAAACATGGCGCAACGTTCTCCATTCCACACCCAAAAAAG
AAAAAAAAAACATCTTTCCAAATTTATGTTCCTCACGCAATTTCTCGGTTTAAACTTACT
CTCCCTTTCCCTAATCCCTCTCTTGTGCCCAAAGAGGCCCAAAGGCCACACAGCCCAAAG
CCTACATGACAACACGAGGCCCACGCAACCGCGCGTTGGTGGGTTCGGCCCAACACGTCA
CGCATCTGGGCTTTCCTTCCTCCTCCTCCCAGCCACAGGCAGCTGACGTCACGGACGCAT
CTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGG
GCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCAGCGGC
GGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGC
GGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTA
CGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGGTTTTTCTCCCATCCTCTCC
CCCACCACACACACACAATTCGCCATATGCGCCCAACGATGAGATGTGATGAGATGAGAT
GCGTGCGCTTGCTT

consensusID : consensus_13590#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 528
fasta sequence

                              [GTTAGGCTTCCCCAGATATGGAAGAATTTTATGAACAAGGGCCCTGGCGAGTTGAGCTTTTTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCCCCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATTTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTCAAAAAGTGTTGTACCAAAAGCCTGCTCCCAAGAAAGAGAAGAAGAGAGATTGGGCCCCCCTGCCCACCCCAAAAAAAGGCAGAATGTTCATTTCTGGGTCCATTTTCAGACAAGCAAAAGGGTCCAGGGTATGAATTTTTTGCAAAGTCGTGTGATGATGAAAAACGATGGGCCCCATATACAGACTAGATATGGATATCCTGGGGACTTAGTTTTAGCATTTAAAAGTGTCATGACTGATGTTAAATTATTGTTAAATTGCTGTACTGTGCAAGCTACTGCCAGTGGAAAAACTGTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF313030             [GTTAGGCTTCCCCAGATATGGAAGAATTTTATGAACAAGGGCCCTGGCGAGTTGAGCTTTTTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCCCCAGCATCCAGGAGAAGACTCCCTTAAGTGTGATACTGGGATTTGCAATTGGCATTGTGATGAATGGTACGCTCTTGGGTCAAAAAGTGTTGTACCAAAAGCCTGCTCCCAAGAAAGAGAAGAAGAGAGATTGGGCCCCCCTGCCCACCCCAAAAAAAGGCAGAATGTTCATTTCTGGGTCCATTTTCAGACAAGCAAAAGGGTCCAGGGTATGAATTTTTTGCAAAGTCGTGTGATGATGAAAAACGATGGGCCCCATATACAGACTAGATATGGATATCCTGGGGACTTAGTTTTAGCATTTAAAAGTGTCATGACTGATGTTAAATTATTGTTAAATTGCTGTACTGTGCAAGCTACTGCCAGTGGAAAAACTGTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13590#2
GTTAGGCTTCCCCAGATATGGAAGAATTTTATGAACAAGGGCCCTGGCGAGTTGAGCTTT
TTGACCTGTTTCATGAACTTTGCTGGTTCCATAGTAAGAGTGTTCCCCAGCATCCAGGAG
AAGACTCCCTTAAGTGTGATACTGGGATTTGCAATTGGCATTGTGATGAATGGTACGCTC
TTGGGTCAAAAAGTGTTGTACCAAAAGCCTGCTCCCAAGAAAGAGAAGAAGAGAGATTGG
GCCCCCCTGCCCACCCCAAAAAAAGGCAGAATGTTCATTTCTGGGTCCATTTTCAGACAA
GCAAAAGGGTCCAGGGTATGAATTTTTTGCAAAGTCGTGTGATGATGAAAAACGATGGGC
CCCATATACAGACTAGATATGGATATCCTGGGGACTTAGTTTTAGCATTTAAAAGTGTCA
TGACTGATGTTAAATTATTGTTAAATTGCTGTACTGTGCAAGCTACTGCCAGTGGAAAAA
CTGTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13590#0      CGCATCTCCCCACCACACCACACGCCATCTCCTCCCTCCGCCGCGGCGACGTCGAGGGAA 60
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      TCGGGGCGGGGCCGGAGCTAGCTAGTTCGCCGCCGGCGAGACGCGTGTGCCATGGTGGCA 120
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      GCGGCGGGGACGATGGAGCTGGAGATCCTGGGGATCAACTTCGGGTGCGTCCTCGCGGCG 180
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      CTCGCGGACGCCAAGATCCCGGAGAAGGACTGCCTGCTCCCGCTCGCCTCCAAGCTGCTC 240
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      GGCTACGCCATCGTCGCCGCCTCCACCACCGTCAAGCTCCCTCAGATATTAAAGATTTTG 300
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      AAGCACGGAAGTGTAAGAGGACTTAGTGTAGCATCCTTTGAGCTTGAGGTTGTCGGCTAC 360
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      ACAATTGCTCTAGCATATTGTATTCATAAAGGACTGCCATTTTCTGCGTATGGGGAACTA 420
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      GCTTTTCTGTTAATCCAAGCAATTATTTTGGTTGCAATCATTTACTATTACTCCCCACCA 480
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      ATGGGAACCAAGACATGGATGAAAGCTTTACTATATTGCGGACTGGCTCCAACAGTATTG 540
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------------------------------
                                                                                   

consensus_13590#0      GGTGGGAAAATTGACCCTGCTCTTTTTGAAGTCCTCTATGCTTCTCAGCATGCTATCTTC 600
consensus_13590#2      ------------------------------------------------------------
consensus_13590#1      ------------------------------------CGGAACAAACTTTGAGTTCAAAAA 24
                                                                                   

consensus_13590#0      TTCTTTGCTAGGCTTCCA--CAGATATGGAAGAATTTTATGAACAAGGGCACTGGCGAGC 658
consensus_13590#2      ------GTTAGGCTTCCC--CAGATATGGAAGAATTTTATGAACAAGGGCCCTGGCGAGT 52
consensus_13590#1      CATGGCGCAACGTTCTCCATTCCACACCCAAAAAAGAAAAAAAAAACATCTTTCCAAATT 84
                             *  * * *  *      * *   ** **    *  ** **   *  *    *  

consensus_13590#0      TGAGCTTTCTGACCTGTTTCATGAACTTTGCTGGTTC---CATAGTAAGAGTGTTCACCA 715
consensus_13590#2      TGAGCTTTTTGACCTGTTTCATGAACTTTGCTGGTTC---CATAGTAAGAGTGTTCCCCA 109
consensus_13590#1      TATGTTCCTCACGCAATTTCTCGGTTTAAACTTACTCTCCCTTTCCCTAATCCCTCTCTT 144
                       *  * *       *  ****  *   *   **   **   * *      *    ** *  

consensus_13590#0      GCATCCAGGAGA-----------AGACTCCCTTAAGT----GTGATACTGGGATCTGCAA 760
consensus_13590#2      GCATCCAGGAGA-----------AGACTCCCTTAAGT----GTGATACTGGGATTTGCAA 154
consensus_13590#1      GTGCCCAAAGAGGCCCAAAGGCCACACAGCCCAAAGCCTACATGACAACACGAGGCCCAC 204
                       *   ***                * **  **  ***      *** *    **    ** 

consensus_13590#0      TTGGCATTGTGATGAATGGTACGCTCT--TGGGTCAGATAGT--GTTGTACCAGAAGCCT 816
consensus_13590#2      TTGGCATTGTGATGAATGGTACGCTCT--TGGGTCAAAAAGT--GTTGTACCAAAAGCCT 210
consensus_13590#1      GCAACCGCGCGTTGGTGGGTTCGGCCCAACACGTCACGCATCTGGGCTTTCCTTCCTCCT 264
                           *   * * **   *** **  *      ****   *    *   * **     ***

consensus_13590#0      GCTCCAAAGAAAGAGAAGAAGAGAGATTGAGCACAACTGCACAACACAAGAAAAGGCAGA 876
consensus_13590#2      GCTCCCAAGAAAGAGAAGAAGAGAGATTGGGCCCCCCTGCCCACCCCAAAAAAAGGCAGA 270
consensus_13590#1      CCTCCCAGCCACAGGCAGCTGACGTCACGGACGCATCTCCCCACCACACCACACGCCATC 324
                        **** *   *   * **  **      *  * *  ** * ** * **  * * * **  

consensus_13590#0      ATGTTCATCT-CTGTGTCCATCTTCAGACAAGCAAAAGGCTCCAGTGTATGAATTTCTTG 935
consensus_13590#2      ATGTTCATTT-CTGGGTCCATTTTCAGACAAGCAAAAGGGTCCAGGGTATGAATTTTTTG 329
consensus_13590#1      TCCTCCCTCCGCCGCGGCGACGTCGAGGGAATCGGGGCGGGGCCGGAGCTAGCTAGTTCG 384
                          * * *   * * * * *  *  **  ** *     *   * *    *   *   * *

consensus_13590#0      CAGAGTCGTGTGATG-ATGAAAAACGATGGGCACCATATACAGACTAGATATGGATATCT 994
consensus_13590#2      CAAAGTCGTGTGATG-ATGAAAAACGATGGGCCCCATATACAGACTAGATATGGATATCC 388
consensus_13590#1      CCGC-CGGCGAGACGCGTGTGCCATGGTGGCAGCGGCGGGGACGATGGAGCTGGAGATCC 443
                       *      * * ** *  **    * * ***   *       *   * **  **** *** 

consensus_13590#0      TGCGTACTTAGTTTTAGCATTTAGAAGTGTCA-TGACTGATGTTAGATTATTGTTAGATT 1053
consensus_13590#2      TGGGGACTTAGTTTTAGCATTTAAAAGTGTCA-TGACTGATGTTAAATTATTGTTAAATT 447
consensus_13590#1      TGGGGATCAACTTCGGGTGCGTCCTCGCGGCGCTCGCGGACGCCAAGATCCCGGAGAAGG 503
                       ** * *   * **   *    *    * * *  *  * ** *  *   *   *    *  

consensus_13590#0      GCTGTACTGTGCAAGCTA--CTGACAGTGGAAAAACTGTTCTCTTAACTCTATGTTTGAG 1111
consensus_13590#2      GCTGTACTGTGCAAGCTA--CTGCCAGTGGAAAAACTGTTTTTTTAAAAAAAAAAAAAAA 505
consensus_13590#1      ACTGC-CTGCTCCCGCTCGCCTCCAAGCTGCTCGGCTACGCCATCGTCGCCGCCTCCACC 562
                        ***  ***  *  ***   **   **  *     **      *                

consensus_13590#0      ACTATTTTTTTATCGTCTGTTTATTTTTCAGGCATAAATATTGTAAGCACGGGGCTACAT 1171
consensus_13590#2      AAAAAAAAAAAAAAAAAAAAAAA------------------------------------- 528
consensus_13590#1      ACCGTCAAGCTCCCTCAGGTTTTTCTCCCATCCTCTCCCCCACCACACACACACAATTCG 622
                       *                                                           

consensus_13590#0      ACAAAATCCAGAAAGTTGTTTCTCAAAAAAAAAAA----------------- 1206
consensus_13590#2      ----------------------------------------------------
consensus_13590#1      CCATATGCGCCCAACGATGAGATGTGATGAGATGAGATGCGTGCGCTTGCTT 674