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Oryza sativa
cluster # 13600 cluster # 13600       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13600#0 length = 1018 sequences # 11  
consensus_13600#1 length = 734 sequences # 2  

consensusID : consensus_13600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1018
fasta sequence
                              [ATCTCACCCCCAAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACAGCGAGAGCCTTCCACTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT-GGAAGTGCTTTGGCTGCTGACGCCTTCG-CCCAAGTCAAG-CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA-AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA-TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCG-CCTT-GGGGAA-GGGAAGAAACCGACGGCTATCA-TT-GGAGAAGTCGCGGATGAG-TTGGAGTTAGACCTGGTTGTCCTAAGCA-TGGAAGCAA-TACATT--CCAA-GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCA-CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG-AATATCAATAAAAACATGTTTCAGGTTTTTAGATTCAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]

[+] EMBL CF340171             [ATCTCACCCCCAAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACAGCGAGAGCCTTCCACTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT GGAAGTGCTTTGGCTGCTGACGCCTTCG CCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF339174             [ATCTCACCCCCAAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACAGCGAGAGCCTTCCACTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT GGAAGTGCTTTGGCTGCTGACGCCTTCG C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK104841             [ TCTCACCCCCAAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACAGCGAGAGCCTTCCACTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT GGAAGTGCTTTGGCTGCTGACGCCTTCG CCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCG CCTT GGGGAA GGGAAGAAACCGACGGCTATCA TT GGAGAAGTCGCGGATGAG TTGGAGTTAGACCTGGTTGTCCTAAGCA TGGAAGCAA TACATT  CCAA GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCA CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG AATATCAATAAAAACATG                                                                                           ]
[+] EMBL OSS4551A             [           AAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACA AGNANGCCTTCCACTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCG CGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCNGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACG GGNNCGNGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATNAATCTGGGAAGTGCTTTNGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB668584             [                                                                      CTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT GGAAGTGCTTTGGCTGCTGACGCCTTCG CCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCG CCTT GGGGAA GGGAAGAAACCGACGGCTATCA TT GGAGAAGTCGCGGATGAG TTGGAGTTAGACCTGGTTGTCCTAAGCA TGGAAGCAA TACATT  CCAA GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCA CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTGAAATATCA                                                                                                      ]
[+] EMBL AK064928             [                                                                               CCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCCTCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT GGAAGTGCTTTGGCTGCTGACGCCTTCG CCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCG CCTT GGGGAA GGGAAGAAACCGACGGCTATCA TT GGAGAAGTCGCGGATGAG TTGGAGTTAGACCTGGTTGTCCTAAGCA TGGAAGCAA TACATT  CCAA GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCA CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG AATATCAATA                                                                                                   ]
[-] EMBL CB668585             [                                                                                                                                                                 TATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGAGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTTAGAGCCGAAGTGAATGAATCT GGAAGTGCTTTGGCTGCTGACGCCTTCG CCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCG CCTT GGGGAA GGGAAGAAACCGACGGCTATCA TT GGAGAAGTCGCGGATGAG TTGGAGTTAGACCTGGTTGTCCTAAGCA TGGAAGCAA TACATT  CCAA GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCA CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG AATAGCAATAAAAACATGTTTCAGGTTTTTAGATTCAAAAAAAAGGG                                                              ]
[+] EMBL C28073               [                                                                                                                                                                                                                                                                                                                                    AAGTGCTTTGGCTGCTGACGCCTTCG CCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCC CCTTGGGGGAAGGGGAAGAAACCGACGGCTATCA TTGGGAGAAGTCGCGGATGAGTTTGGAGTTAGACCTGGTTGTCCTAAGCATTGGAAGCAATTACATTTNCCAANGCAC                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM038166             [                                                                                                                                                                                                                                                                                                                                    gAGTGCTT  GCTGCTGACG CTTCG CCC ATTCAAGCCATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGA GGCACTAGACA GCT CA CAACATCCGCTTCTCTAGCACAAGAAGTATGGAGC AACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCACTTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCGCCCTT GGGGAA GGGAAGAAACCGACGGCTATCACTT GGAGAAGTCGCGGATGAG TTGGAGTTAGACCTGGTTGTCCTAAGCA TGGAAGC A TACATT  CCAA GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCACCCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG AATATCAATAAACACCTGTTTCAGGTTTTTAGATTCCCTTAAAAA                                                                ]
[+] EMBL AU082887             [                                                                                                                                                                                                                                                                                                                                     AGTGCTTTGGCTG TGACG CTTCGCCCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCTGCAGCAACATCCGCTTCTCTAGCA AAGAAGTATGGAGCAAACATAACTGTAGTTGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCA TTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCG CCTT GGGGAA GGGAAGAAACCGACGGCTATCA TT GGAGAAGTCCCGGATGAG TTGGAGTTAGACCTGGTTGTCCTAAGCA TGGAAGCAA TACATT  CCAA GCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCA CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGTCTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG AATATCAATAAAAACATGTTTCAGGTTTTTAAA   AAAAAA                                                                   ]
[+] EMBL CF327760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAAATGACCTTAGAGCTTTTCTTTCA CCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATTTCCTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTTGATTATGTG AATATCAATAAAAACATGTTTCAGGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]


>consensus_13600#0 ATCTCACCCCCAAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACAGCGAGAGCCTTCCA CTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCC TCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCG CTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAG GCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTT AGAGCCGAAGTGAATGAATCTGGAAGTGCTTTGGCTGCTGACGCCTTCGCCCAAGTCAAG CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCT GCAGCAACATCCGCTTCTCTAGCAAAGAAGTATGGAGCAAACATAACTGTAGTTGTGATT GATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCATTAGATGG CATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCGCCTTGGGGAAGGGAAG AAACCGACGGCTATCATTGGAGAAGTCGCGGATGAGTTGGAGTTAGACCTGGTTGTCCTA AGCATGGAAGCAATACATTCCAAGCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCG TGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCACCTGTCATG ACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGT CTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTT GATTATGTGAATATCAATAAAAACATGTTTCAGGTTTTTAGATTCAAAAAAAAAGGAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT



consensusID : consensus_13600#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 734
fasta sequence
                              [CGAGGGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGTGAGTAGATCCGAAGTGAATGAATCTGGAAGTGCTTTGGCTGCTGACGCCTTCGCCCAAGTCAAGCATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGTGATTGA-TGATAAG-CCCAAGGAAGAGTTCCCAGAGCATGATA-C-TCAGA-TGTCAAGCATTAGATGGCATCTCTCAGAAG-GTGGATTTA-CGGAGTTTGGGTTGATGGAGCG-CCTTGGGGAAGGGAAGAAACCGA-CGGCTATCATTGGAGAAGTC-GCGGATGAGTTGGAGTTAGACCTGGTTGTCCTAAGCATGGAAGCAATACA-TTCCAAGCACGTTGATGGGAATTTGCTGGCT-GAATTCATCCCGT-GCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCT-TTTCTTT-CACCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTT-CCAGATGTAATTTCTACAGATGTCTTTGGGTCATTTATGGATGTACCTTTGATGATTTTCTGTTGGATTCCATAATTTTGATTATGTGAATATCAATAAAACATGTTTCAGGTTTTTAAAAAAAAAA]

[+] EMBL CF326060             [CGAGGGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGTGAGTAGATCCGAAGTGAATGAATCTGGAAGTGCTTTGGCTGCTGACGCCTTCGCCCAAGTCAAGCATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGTGATTGA TGATAAG CCCAAGGAAGAGTTCCCAGAGCATGATA C TCAGA TGTCAAGCATTAGATGGCATCTCTCAGAAG GTGGATTTA CGGAGTTTGGGTTGATGGAGCG CCTTGGGGAAGGGAAGAAACCGA CGGCTATCATTGGAGAAGTC GCGGATGAGTTGGAGTTAGACCTGGTTGTCCTAAGCATGGAAGCAATACA TTCCAAGCACGTTGATGGGAATTTGCTGGCT GAATTCATCCCGT GCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCT TTTCTTT CACCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTT CCAGATGTAATTTCTACAGATGTCT                                                                                                      ]
[+] EMBL BM037964             [                                                                                                                                                                                                                                                               catttcaatGTGATTGANTGATAAGTCCCAAGGAAGAGTTCCCAGAGCATGATATCGTCAGAGTNTCAAGCATTATATGGCATCTCTCAGAAGTGTGGATTTATCGGANTTTGGGTTGATGGAGCGTCCTTGGGGAAGGGAAGAAACCGATCGGCTATCATTGGAGAAGTCNGCGGATGAGTTGGAGTTAGACCTGGTTGTCCTAAGCATGGAAGCAATACAGTGCCAAGCACGTTGATGGGAATTTGCTGGCTGGAATTCATCCCGTGGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTGTTTCTTTGCACCTGTCATGACGTGAATGGNAGGCAAATAATCTGTTTCACCTCTTTGCCAGATGTGAATT TACAGA GTCTTTGGGTCATTTATGGATGTACCTTTGATGATTTTCTGTTGGATTCCATAATTTTGATTATGTGAATATCAATAAAACATGTTTCAGGTTTTTAAAAAAAAAA]


>consensus_13600#1 CGAGGGCGCTATGGCCTTCGCCAGCTCGCTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCC GGAGCTCGCCTCCTTCCTCCCGCCCCAGGCCAAGAGGGGCGCCGTCTCCCTCGCCGCCAC GCGGCGCCGGGGAGCCCGGATTGTGAGTAGATCCGAAGTGAATGAATCTGGAAGTGCTTT GGCTGCTGACGCCTTCGCCCAAGTCAAGCATGTTCTACTTCCTGTCACCGACCGCAACCC TTACCTCTCAGAGGGCACTAGACAGTGATTGATGATAAGCCCAAGGAAGAGTTCCCAGAG CATGATACTCAGATGTCAAGCATTAGATGGCATCTCTCAGAAGGTGGATTTACGGAGTTT GGGTTGATGGAGCGCCTTGGGGAAGGGAAGAAACCGACGGCTATCATTGGAGAAGTCGCG GATGAGTTGGAGTTAGACCTGGTTGTCCTAAGCATGGAAGCAATACATTCCAAGCACGTT GATGGGAATTTGCTGGCTGAATTCATCCCGTGCCCCGTTTTACTGCTCCCGCTCTGAAAT GACCTTAGAGCTTTTCTTTCACCTGTCATGACTTGAATGGAAGGCAAATAATCTGTTTCA CCTCTTTCCAGATGTAATTTCTACAGATGTCTTTGGGTCATTTATGGATGTACCTTTGAT GATTTTCTGTTGGATTCCATAATTTTGATTATGTGAATATCAATAAAACATGTTTCAGGT TTTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13600#0      ATCTCACCCCCAAAGTCGCCGTCTCCTCTTCCTCCGACGAGCGACAGCGAGAGCCTTCCA 60
consensus_13600#1      ------------------------------------------------------------
                                                                                   

consensus_13600#0      CTCTCCTCTCCTCTCCTCTCCACGCCATTCCAGAACCAACCCTCGCCGCCGCGTCGCTCC 120
consensus_13600#1      ------------------------------------------------------------
                                                                                   

consensus_13600#0      TCTCCCCGCCGACGAATCCAGGCCCCCGGATTCCCCCGCGCTATGGCCTTCGCCAGCTCG 180
consensus_13600#1      --------------------------------CGAGGGCGCTATGGCCTTCGCCAGCTCG 28
                                                       *    ***********************

consensus_13600#0      CTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAG 240
consensus_13600#1      CTCCTCCCGGCGCCGCCGGCCAGCGTCGCCCCGGAGCTCGCCTCCTTCCTCCCGCCCCAG 88
                       ************************************************************

consensus_13600#0      GCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGGAGTT 300
consensus_13600#1      GCCAAGAGGGGCGCCGTCTCCCTCGCCGCCACGCGGCGCCGGGGAGCCCGGATTGTGAGT 148
                       *******************************************************    *

consensus_13600#0      AGAGCCGAAGTGAATGAATCTGGAAGTGCTTTGGCTGCTGACGCCTTCGCCCAAGTCAAG 360
consensus_13600#1      AGATCCGAAGTGAATGAATCTGGAAGTGCTTTGGCTGCTGACGCCTTCGCCCAAGTCAAG 208
                       *** ********************************************************

consensus_13600#0      CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAGGCT 420
consensus_13600#1      CATGTTCTACTTCCTGTCACCGACCGCAACCCTTACCTCTCAGAGGGCACTAGACAG--- 265
                       *********************************************************   

consensus_13600#0      GCAGCAACATCCGCTTCTCTAGCAAAGAAGTATGGAGCAAACATAACTGTAGTTGTGATT 480
consensus_13600#1      -------------------------------------------------------TGATT 270
                                                                              *****

consensus_13600#0      GATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCATTAGATGG 540
consensus_13600#1      GATGATAAGCCCAAGGAAGAGTTCCCAGAGCATGATACTCAGATGTCAAGCATTAGATGG 330
                       ************************************************************

consensus_13600#0      CATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCGCCTTGGGGAAGGGAAG 600
consensus_13600#1      CATCTCTCAGAAGGTGGATTTACGGAGTTTGGGTTGATGGAGCGCCTTGGGGAAGGGAAG 390
                       ************************************************************

consensus_13600#0      AAACCGACGGCTATCATTGGAGAAGTCGCGGATGAGTTGGAGTTAGACCTGGTTGTCCTA 660
consensus_13600#1      AAACCGACGGCTATCATTGGAGAAGTCGCGGATGAGTTGGAGTTAGACCTGGTTGTCCTA 450
                       ************************************************************

consensus_13600#0      AGCATGGAAGCAATACATTCCAAGCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCG 720
consensus_13600#1      AGCATGGAAGCAATACATTCCAAGCACGTTGATGGGAATTTGCTGGCTGAATTCATCCCG 510
                       ************************************************************

consensus_13600#0      TGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCACCTGTCATG 780
consensus_13600#1      TGCCCCGTTTTACTGCTCCCGCTCTGAAATGACCTTAGAGCTTTTCTTTCACCTGTCATG 570
                       ************************************************************

consensus_13600#0      ACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGT 840
consensus_13600#1      ACTTGAATGGAAGGCAAATAATCTGTTTCACCTCTTTCCAGATGTAATTTCTACAGATGT 630
                       ************************************************************

consensus_13600#0      CTTCTGGGTCATTTTATGGATGTACCTTCTGAATGATTTTCTGTTGGATTCCATAATTTT 900
consensus_13600#1      CTT-TGGGTCATTT-ATGGATGTACCTTT--GATGATTTTCTGTTGGATTCCATAATTTT 686
                       *** ********** *************    ****************************

consensus_13600#0      GATTATGTGAATATCAATAAAAACATGTTTCAGGTTTTTAGATTCAAAAAAAAAGGAAAA 960
consensus_13600#1      GATTATGTGAATATCAATAAAA-CATGTTTCAGGTTTTTAAA---AAAAAAA-------- 734
                       ********************** ***************** *   *******        

consensus_13600#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT 1018
consensus_13600#1      ----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)