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Oryza sativa
cluster # 13610 cluster # 13610       Sequences # 13       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13610#0 length = 1735 sequences # 5  
consensus_13610#1 length = 1154 sequences # 4  
consensus_13610#2 length = 790 sequences # 1  
consensus_13610#3 length = 758 sequences # 1  
consensus_13610#4 length = 747 sequences # 1  
consensus_13610#5 length = 722 sequences # 1  

consensusID : consensus_13610#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1735
fasta sequence
                              [TCTCGACCACGTCTTCCCTCCCCCGCGGCGAAGCAATGGCGACCTCGTCGCCGCCGTGCGCTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCCCCGCGGCGCCACCTCGCCTGCGCCTGCCCCTCCGCCGCTCGCCGCCCCCCGCGCGCGCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAGGACGACAGGTCAGGGTCACTCCCACCTCTTGCCGAGCTCGTGAACAATCGTCGCATCGTGATGCGTCTGTATGTGTGCTACCTTGCGTTGTGTGTATCAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGTATGTTGCTCATTGTTCATCTGCTGTTCTTACTGTCTTACACTGTTTCAGTTTAACCTTACCTGTCACAAAAGTTGTGCTGTTTTCACCTGGAAGTTGGAATGGCATGGAGTCACTTCATGTGTGTATGAGTGTATCCAAGATGTTAAATGTTCTAATTTTGTTTTGATCATGCAACCTTGTCATGTACTTATCATTGATAATTTGTATTTGGTTATACTGACTGTAGGCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACTTTCTGAGTCAAGAAAATGTCCATGTATCATATGTTCATTCATCTTTGGCTAACTCAAAAAAAAGGGA]

[+] EMBL AK101052             [TCTCGACCACGTCTTCCCTCCCCCGCGGCGAAGCAATGGCGACCTCGTCGCCGCCGTGCGCTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCCCCGCGGCGCCACCTCGCCTGCGCCTGCCCCTCCGCCGCTCGCCGCCCCCCGCGCGCGCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAGGACGACAGGTCAGGGTCACTCCCACCTCTTGCCGAGCTCGTGAACAATCGTCGCATCGTGATGCGTCTGTATGTGTGCTACCTTGCGTTGTGTGTATCAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGTATGTTGCTCATTGTTCATCTGCTGTTCTTACTGTCTTACACTGTTTCAGTTTAACCTTACCTGTCACAAAAGTTGTGCTGTTTTCACCTGGAAGTTGGAATGGCATGGAGTCACTTCATGTGTGTATGAGTGTATCCAAGATGTTAAATGTTCTAATTTTGTTTTGATCATGCAACCTTGTCATGTACTTATCATTGATAATTTGTATTTGGTTATACTGACTGTAGGCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACT                                                                   ]
[+] EMBL CF328933             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACTTTCTGAGTCACTTATTTGTCCATGTATCATATGTTCATTCATCTTTGGCTAACTCAAAAAAAAGGGA]
[-] EMBL D43299               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CACATCATCA CGATGCTGTTAATCTG AAC CCATGGGTTACTAGCTGCTACTGTCTACTAGCAAACGATGTCTAG TCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGA TCCTGCATCTATGAATGGGCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACT                                                                   ]
[+] EMBL CF330115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACTTTCTGAGTCAAGAAAA                                                   ]
[-] EMBL CF330114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACTTTCTGAGTCAAGAAAAa                                                  ]


>consensus_13610#0 TCTCGACCACGTCTTCCCTCCCCCGCGGCGAAGCAATGGCGACCTCGTCGCCGCCGTGCG CTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCC CCGCGGCGCCACCTCGCCTGCGCCTGCCCCTCCGCCGCTCGCCGCCCCCCGCGCGCGCCA AGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGG AATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAGGACGACAGGT CAGGGTCACTCCCACCTCTTGCCGAGCTCGTGAACAATCGTCGCATCGTGATGCGTCTGT ATGTGTGCTACCTTGCGTTGTGTGTATCAGCTGCTTGCCGTCGGACTTGGAGGGCGCGAT ATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGT ATGTTGCTCATTGTTCATCTGCTGTTCTTACTGTCTTACACTGTTTCAGTTTAACCTTAC CTGTCACAAAAGTTGTGCTGTTTTCACCTGGAAGTTGGAATGGCATGGAGTCACTTCATG TGTGTATGAGTGTATCCAAGATGTTAAATGTTCTAATTTTGTTTTGATCATGCAACCTTG TCATGTACTTATCATTGATAATTTGTATTTGGTTATACTGACTGTAGGCAGAGCTACTGA TCCCTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTCAA GGATATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTG ATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCA GCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTG ATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTATAA GACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATG TTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGT TGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACC CAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAG ACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGA ACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAA AGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGC TGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAG TTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGA TTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATA GTTACATATCCTTCTGTTTCTGCAAATAATGAAGATCTGAATTGTACTTTCTGAGTCAAG AAAATGTCCATGTATCATATGTTCATTCATCTTTGGCTAACTCAAAAAAAAGGGA



consensusID : consensus_13610#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1154
fasta sequence
                              [TCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTGCATTTGCATAAGCAAGCTAGCATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAAGTGCTGATGTAGAATTCTATGCTCAAAGACATCCAGCCTGTTCAATGCACTGAAGTTTCTTTCAATCTACTATCCTTTTAAATCTGTCTATTTTGACCATTATCTTCTTCATGCTACTATTACTGTTTGCATGCAAATCCCATTTCAGTATGATATCCTAAAATATTACCACTTTTAATTCAATGAAGATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTGTGTGCAAATAATGAAGATCTGAATTGTACTTTCAAAAAAAAGA]

[+] EMBL CB675410             [TCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTGCATTTGCATAAGCAAGCTAGCATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAAGTGCTGATGTAGAATTCTATGCTCAAAGACATCCAGCCTGTTCAATGCACTGAAGTTTCTTTCAATCTACTATCCTTTTAAATCTGTCTATTTTGACCATTATCTTCTTCATGCTACTATTACTGTTTGCATGCAAATCCCATTTCAGTATGATATCCTAAAATATTACCACTTTTAATTCAATGAAGATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCAC                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB649367             [                                                                                                                                                                                                                                                                                                                                                                                                   CTATTTTGACCATTATCTTCTTCATGCTACTATTACTGTTTGCATGCAAATCCCATTTCAGTATGATATCCTAAAATATTACCACTTTTAATTCAATGAAGATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTGTGTGCAAATAATGAAGATCTGAATTGTACTTTCAAAAAAAAGA]
[-] EMBL CB675411             [                                                                                                                                                                                                                                                                                                                                                                                                       nTTGACCATTATCTTCTTCATGCTACTATTACTGTTTGCATGCAAATCCCATTTCAGTATGATATCCTAAAATATTACCACTTTTAATTCAATGAAGATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTT TCTGCAAATAATGAAGATCTGAATTGTACTTTCtgagt     ]
[-] EMBL CB680343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGTTGGCTATAATGTTCGAAATCTGCGCCGGAATTTCGTAAGCACTTTTACCGCTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTGGACAATATCCGGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGGTGGTACTGTCTAGTAGCAAGCGATGTGTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTAGGAATGATCCTAAACAATGTTAGCTCCTATATAACATTTCTGTAGATAGTTACATAT                                                     ]


>consensus_13610#1 TCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTG GAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAA GTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATC AGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTG CATTTGCATAAGCAAGCTAGCATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAA GTGCTGATGTAGAATTCTATGCTCAAAGACATCCAGCCTGTTCAATGCACTGAAGTTTCT TTCAATCTACTATCCTTTTAAATCTGTCTATTTTGACCATTATCTTCTTCATGCTACTAT TACTGTTTGCATGCAAATCCCATTTCAGTATGATATCCTAAAATATTACCACTTTTAATT CAATGAAGATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAG TTGGCTTTAATGTTCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTTACT CGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAGTAT TCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGAC CTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCAC CATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAA TCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACAT CATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTAGCA AGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGA TTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCCTATATAACA TTTCTGTAGATAGTTACATATCCTTCTGTTGTGTGCAAATAATGAAGATCTGAATTGTAC TTTCAAAAAAAAGA



consensusID : consensus_13610#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 790
fasta sequence
                              [ACCTAGCTCTGATTTCCCCTGATTCGGCAGATTACTGCATGATTCTTAACGTATCACTTTGGAGATGCAGAATTTCTTGTCCATGTAGATTAAATATTTGGCCTGTTGCCCCTATACTGATTGAATTCTTGTTTACAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGGTGGGTATTGGTTCACTTACATTAATCTATGCAGAAAAGGGAGATGGCTAATGGTTTGCATAATACTAATGTGATTTTTTTGTCATGATTTCTTGTATTCATGTTACTTCCTAGCAGTATTTACACAGAAGAACAATTATTTTTTTCGTGGTTAAAACTTATCCAGTTTGGTACAAAATCCTAGCAGCGAATACCATGTAATCACAGAAAGGATGTAGACCATTTTGTGTTACTAGGAAAAATAAAACTGTAGGTTATTTCTAGATTAGGGCATCAAATACTACTCAGAAATGAAAACTCATTAGTTTTCTACTGATATTTGAAATAAACCAATAGCACAAACATCCTTGGTTTTCATCGTGAGAATATTCCTTTTTTCCTCTCTGTATAACAGTATATCATTTCCTTTGAATGCTCCCAGTCTTAATGCATTGACTCTTAAGTATTTTTTTTCCTCTGTTATATTTTCACAATTTATAGACTTTTTGCTCGTTAAGTTTAGTTGGCATTAAATTTATTCTGCTTAATTTTTGTGTAAATATAAATTCTATCTAATATTTAACTTGAAT]

[+] EMBL CB631115             [ACCTAGCTCTGATTTCCCCTGATTCGGCAGATTACTGCATGATTCTTAACGTATCACTTTGGAGATGCAGAATTTCTTGTCCATGTAGATTAAATATTTGGCCTGTTGCCCCTATACTGATTGAATTCTTGTTTACAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGGTGGGTATTGGTTCACTTACATTAATCTATGCAGAAAAGGGAGATGGCTAATGGTTTGCATAATACTAATGTGATTTTTTTGTCATGATTTCTTGTATTCATGTTACTTCCTAGCAGTATTTACACAGAAGAACAATTATTTTTTTCGTGGTTAAAACTTATCCAGTTTGGTACAAAATCCTAGCAGCGAATACCATGTAATCACAGAAAGGATGTAGACCATTTTGTGTTACTAGGAAAAATAAAACTGTAGGTTATTTCTAGATTAGGGCATCAAATACTACTCAGAAATGAAAACTCATTAGTTTTCTACTGATATTTGAAATAAACCAATAGCACAAACATCCTTGGTTTTCATCGTGAGAATATTCCTTTTTTCCTCTCTGTATAACAGTATATCATTTCCTTTGAATGCTCCCAGTCTTAATGCATTGACTCTTAAGTATTTTTTTTCCTCTGTTATATTTTCACAATTTATAGACTTTTTGCTCGTTAAGTTTAGTTGGCATTAAATTTATTCTGCTTAATTTTTGTGTAAATATAAATTCTATCTAATATTTAACTTGAAT]


>consensus_13610#2 ACCTAGCTCTGATTTCCCCTGATTCGGCAGATTACTGCATGATTCTTAACGTATCACTTT GGAGATGCAGAATTTCTTGTCCATGTAGATTAAATATTTGGCCTGTTGCCCCTATACTGA TTGAATTCTTGTTTACAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTT CTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGGTGGGTATTGGTTCACTTA CATTAATCTATGCAGAAAAGGGAGATGGCTAATGGTTTGCATAATACTAATGTGATTTTT TTGTCATGATTTCTTGTATTCATGTTACTTCCTAGCAGTATTTACACAGAAGAACAATTA TTTTTTTCGTGGTTAAAACTTATCCAGTTTGGTACAAAATCCTAGCAGCGAATACCATGT AATCACAGAAAGGATGTAGACCATTTTGTGTTACTAGGAAAAATAAAACTGTAGGTTATT TCTAGATTAGGGCATCAAATACTACTCAGAAATGAAAACTCATTAGTTTTCTACTGATAT TTGAAATAAACCAATAGCACAAACATCCTTGGTTTTCATCGTGAGAATATTCCTTTTTTC CTCTCTGTATAACAGTATATCATTTCCTTTGAATGCTCCCAGTCTTAATGCATTGACTCT TAAGTATTTTTTTTCCTCTGTTATATTTTCACAATTTATAGACTTTTTGCTCGTTAAGTT TAGTTGGCATTAAATTTATTCTGCTTAATTTTTGTGTAAATATAAATTCTATCTAATATT TAACTTGAAT



consensusID : consensus_13610#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 758
fasta sequence
                              [TACATGGGGATGCCGCCTCCTATGGTTCAGGCCTTAAGCCATGCTTTGAGGCCCAGCCCTTACACAAGGGCCTAACCAACTTGTCCCGTTTTCCAGTGCTAATATTGTTCTTTACTACAAGTTTCATTGACCTATTTCATGTTTAGTTCCTTCTGTACGTAGTGTTTCACCTATCTCTTGCTAATTTTCATTCCCAACTTTGCAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCTGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTGGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCTTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTAAGGCAAATAGTGAAGATCTGAA]

[-] EMBL CB631116             [TACATGGGGATGCCGCCTCCTATGGTTCAGGCCTTAAGCCATGCTTTGAGGCCCAGCCCTTACACAAGGGCCTAACCAACTTGTCCCGTTTTCCAGTGCTAATATTGTTCTTTACTACAAGTTTCATTGACCTATTTCATGTTTAGTTCCTTCTGTACGTAGTGTTTCACCTATCTCTTGCTAATTTTCATTCCCAACTTTGCAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCTGGAAAGTGGAAAGTATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGTTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTGGCAAGCGATGTCTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGCTCTTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTAAGGCAAATAGTGAAGATCTGAA]


>consensus_13610#3 TACATGGGGATGCCGCCTCCTATGGTTCAGGCCTTAAGCCATGCTTTGAGGCCCAGCCCT TACACAAGGGCCTAACCAACTTGTCCCGTTTTCCAGTGCTAATATTGTTCTTTACTACAA GTTTCATTGACCTATTTCATGTTTAGTTCCTTCTGTACGTAGTGTTTCACCTATCTCTTG CTAATTTTCATTCCCAACTTTGCAGCACTTTTACCACTGTTTACTCGATGAGACCGTTGC CAACTGGTGCAGTCTTTCGACAATATCCTGGAAAGTGGAAAGTATTCTATGATGACCCAA AGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCCGACCTGATGCAACAGACA TTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGAGGCACCATCATTGATGAACA ATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAGAGTAATCTCCAAGTGAAAGT CTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATCCACATCATCAGCGATGCTGT TAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCTACTGGCAAGCGATGTCTAGTTC ACGTTGCAGGACGTGTACAAGCTACCAAGATGTGTACTTGCACGATTGTATTGTAGATTC CTGCATCTATGAATGATCCTAAACAATGTTAGCTCTTATATAACATTTCTGTAGATAGTT ACATATCCTTCTGTTAAGGCAAATAGTGAAGATCTGAA



consensusID : consensus_13610#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 747
fasta sequence
                              [GCTCCTCTCCTCCGCCGCCACCTCGCCTGCCCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAGGACGACAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAACGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGACACAGGCCAGGTTTGGATGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCGGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTGCATTTGCATAAGCAAGCTAGCATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAAGTGCTGATGTAGAATTCTATGCTCATAGACATCCAGCCTGTTCAATGCACTGAAGTTTCTTTCAATCTACTATCCTTTTAAATCTGGCTATTTTGACCATTATCTTCTTCGTGCT]

[+] EMBL CB649366             [GCTCCTCTCCTCCGCCGCCACCTCGCCTGCCCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAGGACGACAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAACGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGACACAGGCCAGGTTTGGATGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCGGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTGCATTTGCATAAGCAAGCTAGCATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAAGTGCTGATGTAGAATTCTATGCTCATAGACATCCAGCCTGTTCAATGCACTGAAGTTTCTTTCAATCTACTATCCTTTTAAATCTGGCTATTTTGACCATTATCTTCTTCGTGCT]


>consensus_13610#4 GCTCCTCTCCTCCGCCGCCACCTCGCCTGCCCCAAGTTCGGCAAGTTCGAGGCCTCCGAC GCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGCGGCGGCGGGTGATGGG GCGGCGGAACAGAAAGCGGAGGAGGACGACAGCTGCTTGCCGTCGGACTTGGAGGGCGCG ATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATT GCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAACGAGCACAGGCTGAGGTC TGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGACACAGGCCAGGTTTGGATG CCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCGGTG GACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGA TGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGC ATCTCAACTCTCTGATGATCCTGATCTTACTGCATTTGCATAAGCAAGCTAGCATAAACC TACGTTCTTGGCCATCACGGCATCACATGAAAGTGCTGATGTAGAATTCTATGCTCATAG ACATCCAGCCTGTTCAATGCACTGAAGTTTCTTTCAATCTACTATCCTTTTAAATCTGGC TATTTTGACCATTATCTTCTTCGTGCT



consensusID : consensus_13610#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 722
fasta sequence
                              [CCTCGCCTTTACAGAGCGCTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCCCCGCAGAGCCACCTCACCTGCGCCTGCCCCTCCGCCGCTCGCCGCCCCCCGCGCGCGCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACAGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGAGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAAGACGACAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGA]

[+] EMBL CB680342             [CCTCGCCTTTACAGAGCGCTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCCCCGCAGAGCCACCTCACCTGCGCCTGCCCCTCCGCCGCTCGCCGCCCCCCGCGCGCGCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACAGAGGCCTCCGCCGAGGAGGCGGAATCGGCGGAGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAAGACGACAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGCAGAGCTACTGATCCCTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGATATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTCGA]


>consensus_13610#5 CCTCGCCTTTACAGAGCGCTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTC CGCCCCGCGCGCCCTCCCCCGCAGAGCCACCTCACCTGCGCCTGCCCCTCCGCCGCTCGC CGCCCCCCGCGCGCGCCAAGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACAGAGG CCTCCGCCGAGGAGGCGGAATCGGCGGAGGCGGCGGGTGATGGGGCGGCGGAACAGAAAG CGGAGGAAGACGACAGCTGCTTGCCGTCGGACTTGGAGGGCGCGATATGGCAATCGGGGA AGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGCAGAGCTACTGATCC CTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTCAAGGA TATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCCTGATG CTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGCCAGCT TAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATC ATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTATAAGAC CTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGGCTTTAATGTTC GA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      TCTCGACCACGTCTTCCCTCCCCCGCGGCGAAGCAATGGCGACCTCGTCGCCGCCGTGCG 60
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      CTTGCGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCC 120
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      CCGCGGCGCCACCTCGCCTGCGCCTGCCCCTCCGCCGCTCGCCGCCCCCCGCGCGCGCCA 180
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      AGTTCGGCAAGTTCGAGGCCTCCGACGCCGCCCCCACGGAGGCCTCCGCCGAGGAGGCGG 240
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      AATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAGGAGGACGACAGGT 300
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      CAGGGTCACTCCCACCTCTTGCCGAGCTCGTGAACAATCGTCGCATCGTGATGCGTCTGT 360
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      ATGTGTGCTACCTTGCGTTGTGTGTATCAGCTGCTTGCCGTCGGACTTGGAGGGCGCGAT 420
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------------------------------
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      ATGGCAATCGGGGAAGGCGAGCGCCGATTTCGTCAACTCTGGTGGCATGCGAGCCATTGT 480
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ------------------------------------TCCTGGACACACTTGTAAAAGAGA 24
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      ATGTTGCTCATTGTTCATCTGCTGTTCTTACTGTCTTACACTGTTTCAGTTTAACCTTAC 540
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      CAGGCCAGAAAGTTAAGGCCATTTTTCCTGATGCTGGA----GCAGCGGCCCTTCTTAAG 80
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      CTGTCACAAAAGTTGTGCTGTTTTCACCTGGAAGTTGGAATGGCATGGAGTCACTTCATG 600
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      TATCAGTGGACAGATGCAGAGT-TTAAGTGCGCCAGCTTAAGTGACCGGAAACCAGTTGA 139
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      TGTGTATGAGTGTATCCAAGATGTTAAATGTTCTAATTTTGTTTTGATCATGCAACCTTG 660
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      CGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGATGGTGGAATCTGTTGA 199
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      TCATGTACTTATCATTGATAATTTGTATTTGGTTATACTGACTGTAGGCAGAGCTACTGA 720
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      ACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTGCATTTGCATAAGCAAGCTA 259
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      TCC--CTCAGTTGGAATTCCTCAACGAGGAAGGAGCACAGGCTGAGGTCTGGGCACTGTC 778
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      --------------------------------------CCTCGCCTTTACAGAGCGCTTG 22
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      GCATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAAGTGCTGATGTAGAATTCTA 319
consensus_13610#3      ------------------------------------------------------------
consensus_13610#0      AAGGATATTCCTGGACACACTTGTAAAAGAGACAGGCCAGAAAGTTAAGGCCATTTTTCC 838
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      CGCTGCTCCTCTCCTCCGCCGCCGCCTCCTCCCCGCTCCGCCCCGCGCGCCCTCCCCCGC 82
consensus_13610#2      -----------------------ACCTAGCTCTGATTTCCCCTGATTCGGCAGATTACTG 37
                                                                                   

consensus_13610#1      TGCTCAAAGACATCCAGCCTGTTCAATGCACTGA------AGTTTCTTTCAATCTACTAT 373
consensus_13610#3      --------------------------TACATGGG------GATGCCGCCTCCTATGGTTC 28
consensus_13610#0      TGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCGC 898
consensus_13610#4      ---------------GCTCCT-CTCCTCCGCCGC-----------CACCTCGCCTGCCCC 33
consensus_13610#5      AGAGCCACCTCACCTGCGCCTGCCCCTCCGCCGCT-----CGCCGCCCCCCGCGCGCGCC 137
consensus_13610#2      CATGATTCTTAACGTATCACTTTGGAGATGCAGAATTTCTTGTCCATGTAGATTAAATAT 97
                                                                                   

consensus_13610#1      CCTTTTAAAT--CTGTCTATT--TTGACCATTATCTTCTTCAT----GCTACTATTACTG 425
consensus_13610#3      AGGCCTTAAG--CCAT--GCT--TTGAGGCCCAGCCCTTACAC----AAGGGCCTAACCA 78
consensus_13610#0      CAGCTTAAGTGACCGGAAACCAGTTGACGTTGAAGATGAAGTT----GTTGTTATGATTA 954
consensus_13610#4      AAGTTCGGCAAGTTCGAGGCCT-CCGACGCC--GCCCCCACG-----GAGGCCTCCGCCG 85
consensus_13610#5      AAGTTCGGCAAGTTCGAGGCCT-CCGACGCC--GCCCCCACA-----GAGGCCTCCGCCG 189
consensus_13610#2      TTGGCCTGTTGCCCCTATACTGATTGAATTCTTGTTTACAGAAAGTTAAGGCCATTTTTC 157
                                                **                                 

consensus_13610#1      TTTGCATGCAAATCCCATTTCAGTATGAT-ATCCTAAAATATTACCACTTTTAATTCAAT 484
consensus_13610#3      ACTTGTCCCGTTTTCCAGTGC----TAAT-ATTGTTCTTTACTACAAGTTTCATT----- 128
consensus_13610#0      TCCCTGATCATCAGATGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATC 1014
consensus_13610#4      AGGAGGCGGAATCGGCGGCGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAG---- 141
consensus_13610#5      AGGAGGCGGAATCGGCGGAGGCGGCGGGTGATGGGGCGGCGGAACAGAAAGCGGAG---- 245
consensus_13610#2      CTGATGCTGGAGCAGCGGCCCTTCTTAAGTATCAGTGGACAGATGCAGAGTTTAAGTGCG 217
                                                     *                             

consensus_13610#1      GAAGATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGG 544
consensus_13610#3      --------GACCTATT-TCATGTTTAGTTCCTTC--TGTACGTAG---TGTTTCACCTAT 174
consensus_13610#0      CT--ATAAGACCTCTTGTCATGTGGAATCCACGCCTTGTTAGTGGAGATGTTGGAGTTGG 1072
consensus_13610#4      ------GAGGACGACAGCTGCTTGCCGTCGGACT--TGGAGGGCGCGATATGGCAATCGG 193
consensus_13610#5      ------GAAGACGACAGCTGCTTGCCGTCGGACT--TGGAGGGCGCGATATGGCAATCGG 297
consensus_13610#2      CC--AGGTGGGTATTGGTTCACTTACATTAATCTATGCAGAAAAGGGAGATGGCTAATGG 275
                                             *    *                *     *         

consensus_13610#1      CTTTAATGT-------TCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTT 597
consensus_13610#3      CTCT--TGC-------T---AATTTTCATTCCCAACTTTGCAGCACTTTTACCACTGTTT 222
consensus_13610#0      CTTTAATGT-------TCGAAATCTGCGCCGGAATTTCCTAAGCACTTTTACCACTGTTT 1125
consensus_13610#4      GGAAGGCGA-------GCGCCGATTTCGTC--AACTCTGGTGGCATGCGAGCCATTGCAG 244
consensus_13610#5      GGAAGGCGA-------GCGCCGATTTCGTC--AACTCTGGTGGCATGCGAGCCATTGCAG 348
consensus_13610#2      TTTGCATAATACTAATGTGATTTTTTTGTCATGATTTCTT--GTATTCATGTTACTTCCT 333
                                               *        *        * *        * *    

consensus_13610#1      ACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAG 657
consensus_13610#3      ACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCTGGAAAGTGGAAAG 282
consensus_13610#0      ACTCGATGAGACCGTTGCCAACTGGTGCAGTCTTTCGACAATATCCGGGAAAGTGGAAAG 1185
consensus_13610#4      AGCTACTGATCCC----TCAGTTGG---AATTCCTCAACGAGGAACGAGCACAGGCTGAG 297
consensus_13610#5      AGCTACTGATCCC----TCAGTTGG---AATTCCTCAACGAGGAAGGAGCACAGGCTGAG 401
consensus_13610#2      AGCAGTATTTACA-----CAGAAGA-ACAATTATTTTTTTCGTGGTTAAAACTTATCCAG 387
                       *          *      **   *    * *   *               *       **

consensus_13610#1      TATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCC 717
consensus_13610#3      TATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCC 342
consensus_13610#0      TATTCTATGATGACCCAAAGAGGCCTAACCGGTATTTGCTTGCCCGAGAACTTGTAAGCC 1245
consensus_13610#4      GTCTGGGCACTG--TCAAGGATATT---CCTGGACACACTTGT---AAAAGACACAGGCC 349
consensus_13610#5      GTCTGGGCACTG--TCAAGGATATT---CCTGGACACACTTGT---AAAAGAGACAGGCC 453
consensus_13610#2      TTTGGTACAAAATCCTAGCAGCGAATACCATGTAATCACA-----GAAAGGATGTAGACC 442
                                       *           *  * *    *       * *      *  **

consensus_13610#1      GACCTGATGCAACA--GACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGA 775
consensus_13610#3      GACCTGATGCAACA--GACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGA 400
consensus_13610#0      GACCTGATGCAACA--GACATTGAGATAATATTTGGAGGCGGCGATGAACAATCTGACGA 1303
consensus_13610#4      AGGTTTGGATGCCAG-AAAGTTAAGGCCATTTTTCCTGATGCTG--GAGCAG--CGGCCC 404
consensus_13610#5      AG--------------AAAGTTAAGGCCATTTTTCCTGATGCTG--GAGCAG--CGGCCC 495
consensus_13610#2      ATTTTGTGTTACTAGGAAAAATAAAACTGTAGGT--TATTTCTA--GATTAGGGCATCAA 498
                                        *   * *     *   *            **  *      *  

consensus_13610#1      GGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAG 835
consensus_13610#3      GGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAG 460
consensus_13610#0      GGCACCATCATTGATGAACAATGTAATGGGCGTATTTAGTTCCGTGAGCCGGTTTATGAG 1363
consensus_13610#4      TTCTTAAGTATCGGTGGACAG----ATGCA-GAGTTTAA----GTGCGCCAGCTTAAGTG 455
consensus_13610#5      TTCTTAAGTATCAGTGGACAG----ATGCA-GAGTTTAA----GTGCGCCAGCTTAAGTG 546
consensus_13610#2      ATACTACTCAGAAATGAA-AACTCATTAGTTTTCTACTGATATTTGAAATAAACCAATAG 557
                                *    ** * *      *       *         **         *   *

consensus_13610#1      AGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATC 895
consensus_13610#3      AGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATC 520
consensus_13610#0      AGTAATCTCCAAGTGAAAGTCTCAACCAAGCCGTTGATGAGAATCTTTTTGGCCATGATC 1423
consensus_13610#4      ACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGA 515
consensus_13610#5      ACCGGAAACCAGTTGACGTTGAAGATGAAGTTGTTGTTATGATTATCCCTGATCATCAGA 606
consensus_13610#2      CACAAACATCC-TTGGTTTTCATCGTGAGAATATTCCTTTTTTCCTCTCTGTATAACAGT 616
                                *   **    *       *     **  *       *   **   *  *  

consensus_13610#1      CA-CATCATCAGCGATGCTG-TTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCT 953
consensus_13610#3      CA-CATCATCAGCGATGCTG-TTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCT 578
consensus_13610#0      CA-CATCATCAGCGATGCTG-TTAATCTGCAACTCCATGGGTTACTAGCTGCTACTGTCT 1481
consensus_13610#4      TGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCTGATCTTACTGCAT 575
consensus_13610#5      TGGTGGAATCTGTTGAACGGATTGCATCTCAACTCTCTGATGATCCT-ATAAGACCTCTT 665
consensus_13610#2      ATATCATTTCCTTTGAATGCTCCCAGTCTTAATGCATTGACTCTTAAGTATTTTTTTTCC 676
                               **                    **  *  **                     

consensus_13610#1      ACTAGCAAGCGATGT-----CTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGT 1008
consensus_13610#3      ACTGGCAAGCGATGT-----CTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGT 633
consensus_13610#0      ACTAGCAAGCGATGT-----CTAGTTCACGTTGCAGGACGTGTACAAGCTACCAAGATGT 1536
consensus_13610#4      TTGCATAAGCAAGCTAG-CATAAACCTACGTTCTTGGCCATCACGGCATCACATGAAAGT 634
consensus_13610#5      GT-CATGTGGAATC------CACGCCT-TGTTAGTGGAGATGTTGGAGTTGGCTTTAATG 717
consensus_13610#2      TCTGTTATATTTTCACAATTTATAGACTTTTTGCTCGTTAAGTTTAGTTGGCATTAAATT 736
                                                     **    *                   *   

consensus_13610#1      GTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGC 1068
consensus_13610#3      GTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGC 693
consensus_13610#0      GTACTTGCACGATTGTATTGTAGATTCCTGCATCTATGAATGATCCTAAACAATGTTAGC 1596
consensus_13610#4      GCTGATGTAGAATTCTATGCTCATAGACATCCAGCCTGTTCAATGCACTGAAGTTTCTTT 694
consensus_13610#5      TTCGA------------------------------------------------------- 722
consensus_13610#2      TATTCTGCTTAATTTTTGTGTAAATATAAATTCTATCTAATATTTAACTTGAAT------ 790
                                                                                   

consensus_13610#1      TCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTGTGTGCAAATAATGAAGA 1128
consensus_13610#3      TCTTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTAAG-GCAAATAGTGAAGA 752
consensus_13610#0      TCCTATATAACATTTCTGTAGATAGTTACATATCCTTCTGTTTCT-GCAAATAATGAAGA 1655
consensus_13610#4      CAATCTACTATCCTTTTAAATCTGGCTATTTTGACCATTATCTTCTTCGTGCT------- 747
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      TCTGAATTGTACTTTCAAAAAAAAGA---------------------------------- 1154
consensus_13610#3      TCTGAA------------------------------------------------------ 758
consensus_13610#0      TCTGAATTGTACTTTCTGAGTCAAGAAAATGTCCATGTATCATATGTTCATTCATCTTTG 1715
consensus_13610#4      ------------------------------------------------------------
consensus_13610#5      ------------------------------------------------------------
consensus_13610#2      ------------------------------------------------------------
                                                                                   

consensus_13610#1      --------------------
consensus_13610#3      --------------------
consensus_13610#0      GCTAACTCAAAAAAAAGGGA 1735
consensus_13610#4      --------------------
consensus_13610#5      --------------------
consensus_13610#2      --------------------
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)