These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2563 fasta sequence [TGCTTGCTCTACCATATGAGTGCTGCAACTCATGATATTCTACCACTGAAATCCTCTCTCTTTGTTGAAGAGTATGAAACCAACATCCTGCAGTCATCTGATGGCACATTCTCATGTGGCTTCTACAACATCACTAACGCCTACAACATCACTAGCGCCTTCACCTTCTCAATTTGGTACTCCAATTCAGCTGACAAGGCCATCGTATGGAGCGCAAACCGTGGCCGTCCCGTGCACTCAAGGAGATCAGAGATCACTCTGCGCAAGGATGGAAACATAGTCCTCACTGACTATGACGGCACAGTCGTGTGGCAAACTGACGGTAAATTCCCTAATGTTCGATATGTTCAATTATTGAACACTGGTAACCTTGTCTTGAAGAACTCCAGTGGAAACATTGTTTGGCAAAGTTTCGATTCACCGACAGACACTTTGCTTCCTACTCAACGCATTCTCGCTACAACAAAGTTAGTCTCTACCACTGGGTTACAGGTTCCTAGTCACTATACCTTCCGTTTCAGCGATCAGTCGATATTGTCACTTATATATGATGACACTAATGTTTCCGGCGTATACTGGCCAGATCCTGATTACCAGTACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATGGAGAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGATAGAAGCTTGGGGATTAAAAGAAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGCTTGAATAACTCAGATGGAACATGGACAATTTCATGGATTGCTCAACCTCAAACATGCATGACTCATGGTTTGTGTGGTCCATATGGAATCTGCCACTATTCACCTACACCAAGATGTTCATGCCCACCTGGTTATAAGATGAGGAATCCGGGTAACTGGACACAAGGTTGCAAGCCTATTGTCGAAATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACTGATTTTTGGGGTTCTGATCAACAACGTATTGAAAAGGTACCTTGGGAGGTGTGTTGGAACACTTGCATAAGTGACTGCACATGCAAGGGATTTCAATACCAAGAAGGAAATGGTACATGCTATCCAAAATCTTTTCTCTTTAATGGAAGGACTTTCCCAACACCTTTTGTGCGAACGATGTATATCAAACTT-CCTTCAAGTTTGGATGTTTCAAAAAAACCCATTCCACAGTCTAGTATACATGATTATACACTAAGTGGACTTGACTGTGATCATTTAAACACAATAACCACAGAGGCAGTTCGTAACATGAATAAGATTGGTGGGGAGGAACCAAAATGGTTCTACTTCTATGGGTTTATCGGTGTGTTTTTCATTGTTGAGGTTTTCTTCTTCGCATTTGCATGGTTCTTTGTCTTGAGGAAGGAGATGCGGTCATCTCAAGTATGGATAGCTGAGGAAGGCTACAGGGTGATGACTAGTCATTTCCGAATGTATAGTCATAGAGAGCTGGTTAAGGCAACTGAAAGGTTTAAACATGAGCTTGGATGGGGAGGTTCAGGAGTTGTCTATAAGGGAATATTGGATGACGATCGAGCAGTGGTCATAAAAAAGTTGGAAAATGTCACGCAAAATAGGGAGGAGTTTCANGATGAGTTGCATGTTATTTCAAGAATCAACCATATGAACCTAGTAAGAATATATGGTTTTTGCTCAGAAAGATTCCATAGATTGCTGGTCTTAGAGTATGTTGAGAATGGATCATTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAGGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTAGTGGTATGTTATTGCGAGGACCATACTAATTCTAGAAGTCTTCATTTCCTAGGATTACTGTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACTTAAAAAAAAAAGGA] [+] EMBL CB629406 [TGCTTGCTCTACCATATGAGTGCTGCAACTCATGATATTCTACCACTGAAATCCTCTCTCTTTGTTGAAGAGTATGAAACCAACATCCTGCAGTCATCTGATGGCACATTCTCATGTGGCTTCTACAACATCACTAACGCCTACAACATCACTAGCGCCTTCACCTTCTCAATTTGGTACTCCAATTCAGCTGACAAGGCCATCGTATGGAGCGCAAACCGTGGCCGTCCCGTGCACTCAAGGAGATCAGAGATCACTCTGCGCAAGGATGGAAACATAGTCCTCACTGACTATGACGGCACAGTCGTGTGGCAAACTGACGGTAAATTCCCTAATGTTCGATATGTTCAATTATTGAACACTGGTAACCTTGTCTTGAAGAACTCCAGTGGAAACATTGTTTGGCAAAGTTTCGATTCACCGACAGACACTTTGCTTCCTACTCAACGCATTCTCGCTACAACAAAGTTAGTCTCTACCACTGGGTTACAGGTTCCTAGTCACTATACCTTCCGTTTCAGCGATCAGTCGATATTGTCACTTATATATGATGACACTAATGTTTCCGGCGTATACTGGCCAGATCCTGATTACCAGTACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATGGAGAATTTTTTTCGAGTGATCTTGCTAAACATCAAGCCCGTGTTGCCTCTGATAGAAGCTTGAGGATTAAAAGAAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGC ] [+] EMBL CB635887 [ AGTGCTGCAACTCATGATATTCTACCACTGAAATCCTCTCTCTTTGTTGAAGAGTATGAAACCAACATCCTGCAGTCATCTGATGGCACATTCTCATGTGGCTTCTACAACATCACTAACGCCTACAACATCACTAGCGCCTTCACCTTCTCAATTTGGTACTCCAATTCAGCTGACAAGGCCATCGTATGGAGCGCAAACCGTGGCCGTCCCGTGCACTCAAGGAGATCAGAGATCACTCTGCGCAAGGATGGAAACATAGTCCTCACTGACTATGACGGCACAGTCGTGTGGCAAACTGACGGTAAATTCCCTAATGTTCGATATGTTCAATTATTGAACACTGGTAACCTTGTCTTGAAGAACTCCAGTGGAAACATTGTTTGGCAAAGTTTCGATTCACCGACAGACACTTTGCTTCCTACTCAACGCATTCTCGCTACAACAAAGTTAGTCTCTACCACTGGGTTACAGGTTCCTAGTCACTATACCTTCCGTTTCAGCGATCAGTCGATATTGTCACTTATATATGATGACACTAATGTTTCCGGCGTATACTGGCCAGATCCTGATTACCAGTACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATGGAGAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGATAGAAGCTTGGGGATTAAAAGAAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGCTTGAATAACTCAGATGGAACATGGACAATTTCATGGATTGCTCAACCTCAAACAT ] [+] EMBL CB631463 [ ttgaccTGCTGCAACTCATGATATTCTACCACTGAAATCCTCTCTCTTTGTTGAAGAGTATGAAACCAACATCCTGCAGTCATCTGATGGCACATTCTCATGTGGCTTCTACAACATCACTAACGCCTACAACATCACTAGCGCCTTCACCTTCTCAATTTGGTACTCCAATTCAGCTGACAAGGCCATCGTATGGAGCGCAAACCGTGGCCGTCCCGTGCACTCAAGGAGATCAGAGATCACTCTGCGCAAGGATGGAAACATAGTCCTCACTGACTATGACGGCACAGTCGTGTGGCAAACTGACGGTAAATTCCCTAATGTTCGATATGTTCAATTATTGAACACTGGTAACCTTGTCTTGAAGAACTCCAGTGGAAACATTGTTTGGCAAAGTTTCGATTCACCGACAGACACTTTGCTTCCTACTCAACGCATTCTCGCTACAACAAAGTTAGTCTCTACCACTGGGTTACAGGTTCCTAGTCACTATACCTTCCGTTTCAGCGATCAGTCGATATTGTCACTTATATATGATGACACTAATGTTTCCGGCGTATACTGGCCAGATCCTGATTACCAGTACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATGGAGAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGATAGAAGCTTGGGGATTAAAAGAAAGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGCTTGAATAACTCAGATGGAACATGGACAATTTCATGGATTGCTCAAacc ] [+] EMBL CB670158 [ TCAACGCCTTCTCGCTACAACAAAGTTAGTCTCTACCACTGGGTTACAGGTTCCTGGTCACTATTCCTTCCGTTTCAGCGATCAGTAGATATTGTCACTTATATATGATGACGCTAATGTTTCCGGTGTATACTGGCCAGATCCTGATTACCTGTACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATGGAGAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGATAGAAGTTTGGGGATTAAAAGGAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGCTTGAATAACTCAGATGGAACATGGACAATTTCATGGATTGCTCAACCTCAAACATGCATGACTCATGGTTTGTGTGGTCCATATGGAATCTGCCACTATTCACCTACACCAAGATGTTCATGCCCACCTGGTTATAAGATGAGGAATCCGGGTAACTGGACACAAGGTTGCAAGCCTATTGTCGAAATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACTGATTTTTGGGGTTCTGATCAACAACATATTGAAAAGGTACCCTGGGAGGTGTGTTGGAACACTTGCATAAGTGATTGCACATGTAAGGAATTTCAGTACCAAGAAGGAAATGGTACATGCTATCCAAAATCTTTTCTCTTTAATGGAAGGACTTTCCCGACACCTTTTGTGCGAACGATGTATATCAAACTTCCCTTC AGTTTGGATGTTTCTAAAAAACCCATTCCACAGTCTAGTAT ] [+] EMBL CB647530 [ ACACAAGGTTGCAAGCCTATTGTCGAAATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACTGATTTTTGGGGTTCTGATCAACAACGTATTGAAAAGGTACCTTGGGAGGTGTGTTGGAACACTTGCATAAGTGACTGCACATGCAAGGGATTTCAATACCAAGAAGGAAATGGTACATGCTATCCAAAATCTTTTCTCTTTAATGGAAGGACTTTCCCAACACCTTTTGTGCGAACGATGTATATCAAACTT CCTTCAAGTTTGGATGTTTCAAAAAAACCCATTCCACAGTCTAGTATACATGATTATACACTAAGTGGACTTGACTGTGATCATTTAAACACAATAACCACAGAGGCAGTTCGTAACATGAATAAGATTGGTGGGGAGGAACCAAAATGGTTCTACTTCTATGGGTTTATCGGTGTGTTTTTCATTGTTGAGGTTTTCTTCTTCGCATTTGCATGGTTCTTTGTCTTGAGGAAGGAGATGCGGTCATCTCAAGTATGGATAGCTGAGGAAGGCTACAGGGTGATGACTAGTCATTTCCGAATGTATAGTCATAGAGAGCTGGTTAAGGCAACTGAAAGGTTTAAACATGAGCTTGGATGGGGAGGTTCAGGAGTTGTCTATAAGGGAATATTGGATGACGATCGAGCAGTGGTCATAAAAAAGTTGGAAAATGTCACGCAAAATAGGGAGGAGTTTCANGATGAGTTGCATGTTATTTCAAGAATCAACCATATGAACCTAGTAAGAATATATGGTTTTTGCTCAGAAAGATTCCATAGATTGCTGGTCTTAGAGTATGTTGAGAATG ] [+] EMBL CB650141 [ ACACAAGGTTGCAAGCCTATTGTCGAAATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACTGATTTTTGGGGTTCTGATCAACAACGTATTGAAAAGGTACCTTGGGAGGTGTGTTGGAACACTTGCATAAGTGACTGCACATGCAAGGGATTTCAATACCAAGAAGGAAATGGTACATGCTATCCAAAATCTTTTCTCTTTAATGGAAGGACTTTCCCAACACCTTTTGTGCGAACGATGTATATCAAACTT CCTTCAAGTTTGGATGTTTCAAAAAAACCCATTCCACAGTCTAGTATACATGATTATACACTAAGTGGACTTGACTGTGATCATTTAAACACAATAACCACAGAGGCAGTTCGTAACATGAATAAGATTGGTGGGGAGGAACCAAAATGGTTCTACTTCTATGGGTTTATCGGTGTGTTTTTCATTGTTGAGGTTTTCTTCTTCGCATTTGCATGGTTCTTTGTCTTGAGGAAGGAGATGCGGTCATCTCAAGTATGGATAGCTGAGGAAGGCTACAGGGTGATGACTAGTCATTTCCGAATGTATAGTCATAGAGAGCTGGTTAAGGCAACTGAAAGGTTTAAACATGAGCTTGGATGGGGAGGTTCAGGAGTTGTCTATAAGGGAATATTGGATGACGATCGAGCAGTGGTCATAAAAAAGTTGGAAAATGTCACGCAAAATAGGGAGGAGTTTCAGGATGAGTTGCATGTTATTTCAAGAATCAACCATATGAACCTAGTAAGAATATATGGTTTTTGCTCAGAAAGATTCCATAGATTGCTGGTCTTAGAGTATGTTGAGA ] [-] EMBL CB629407 [ TGGTTTTTGCTCAGAAAGATTCCATAGATTGCTGGTCTTAGAGTATGTTGAGAATGGATCATTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTCTAATATCGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAGGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATCTAGCTAGAAGTTAATAAAATAATAATGTACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTAGTGGTATGTTATTGCGAGGACCATACTAATTCTAGAAGTCTTCATTTCCTAGGATTACTGTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACT ] [-] EMBL CB635888 [ AGATTGCTGGTCTTAGAGTATGTTGAGAATGGATCATTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAGGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTAGTGGTATGTTATTGCGAGGACCATACTAATTCTAGAAGTCTTCATTTCCTAGGATTACTGTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACTTAAAAAAAAAAGGA] [-] EMBL CB647531 [ GAGAATGGATCATTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAGGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTGGTGGTATGTTATTGCGAGGACCATACTAATTCTAGAAGTCTTCATTTCCTAGGATTACTGTAATGTGTATAATGTTCTATATAATTGTGT ] [-] EMBL CB650142 [ TTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAGGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTGGTGGTATGTTATTGC ] [-] EMBL CB631464 [ TCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAGGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTAGTGGTATGTTATTGCGAGGACCATACTAATTCTAGAAGTCTTCATTTCCTAGGATTACTGTAAAAGGTATAACGTTCTATATAAT ] consensusID : consensus_13656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 826 fasta sequence [AGAATGGATCATTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAACTTAGAACCTAAGATCGCTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAAGCAGAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAAACGAGTCTTTGATCTGATCATAGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAAGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTCGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCAAGGGAGAATATTTATAATATGGAGTCCCTTAGTGGTATGTTATTGCTAGGACTATACTAATTCTAGAAGTCTTCATTTCCTAGGATCACCGTAATGTATATAAAGTTCTATATAATTGTGTGTCTTACTTATATCTTGTAAATTTTTCATGTTATTTAGTAATGGTCTAATGG] [-] EMBL CB670159 [AGAATGGATCATTGGCTAATGTACTGTTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAACATTTTGCTGGATGAGAACTTAGAACCTAAGATCGCTGACTTTGGGTTGGCAAAGCTGCTTAGTAGATCTGGCTCTAAGCAGAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAAACGAGTCTTTGATCTGATCATAGGAGAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAAGAAGATAGGAAGAAAAGGCCAACAATGGAATCAATAGTCGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAATAAAATAATAATGTACCAAGGGAGAATATTTATAATATGGAGTCCCTTAGTGGTATGTTATTGCTAGGACTATACTAATTCTAGAAGTCTTCATTTCCTAGGATCACCGTAATGTATATAAAGTTCTATATAATTGTGTGTCTTACTTATATCTTGTAAATTTTTCATGTTATTTAGTAATGGTCTAATGG] consensusID : consensus_13656#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [AAGTGTTAATTAAAGATGAATTTGTTAATAAGGATTGGACAATGAGAAATCATTGTGGTTACCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAACAAGAACTTTGGTAAAGTTGGCTGTGTCCTGCGTTGGAGGAAGATAGGAAGAAAAGGCCCACAATGGAATCATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAAGTAAAATAATGAATGTGACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTAGTGGTATGTTATTGCGAGGACCATACTAATTCTACGAAGTCTTCATTTCCTAGGATTACTGTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACTTATATCTCGTAATGTTTTCCATGTTATTTAGTAATGGTCTAATGGAACGGTGGTGGTATATTTTTCTAGTTTTTTTATATTGGCAAAAGTAATGCCAAAAAAAAAA] [+] EMBL BI812638 [AAGTGTTAATTAAAGATGAATTTGTTAATAAGGATTGGACAATGAGAAATCATTGTGGTTACCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACTACTTGCAACAAGAACTTTGGTAAAGTTGGCTGTGTCCTGCGTTGGAGGAAGATAGGAAGAAAAGGCCCACAATGGAATCATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTTAAGTAAAATAATGAATGTGACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTAGTGGTATGTTATTGCGAGGACCATACTAATTCTACGAAGTCTTCATTTCCTAGGATTACTGTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACTTATATCTCGTAATGTTTTCCATGTTATTTAGTAATGGTCTAATGGAACGGTGGTGGTATATTTTTCTAGTTTTTTTATATTGGCAAAAGTAATGCCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13656#0 TGCTTGCTCTACCATATGAGTGCTGCAACTCATGATATTCTACCACTGAAATCCTCTCTC 60 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TTTGTTGAAGAGTATGAAACCAACATCCTGCAGTCATCTGATGGCACATTCTCATGTGGC 120 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TTCTACAACATCACTAACGCCTACAACATCACTAGCGCCTTCACCTTCTCAATTTGGTAC 180 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TCCAATTCAGCTGACAAGGCCATCGTATGGAGCGCAAACCGTGGCCGTCCCGTGCACTCA 240 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AGGAGATCAGAGATCACTCTGCGCAAGGATGGAAACATAGTCCTCACTGACTATGACGGC 300 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ACAGTCGTGTGGCAAACTGACGGTAAATTCCCTAATGTTCGATATGTTCAATTATTGAAC 360 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ACTGGTAACCTTGTCTTGAAGAACTCCAGTGGAAACATTGTTTGGCAAAGTTTCGATTCA 420 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 CCGACAGACACTTTGCTTCCTACTCAACGCATTCTCGCTACAACAAAGTTAGTCTCTACC 480 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ACTGGGTTACAGGTTCCTAGTCACTATACCTTCCGTTTCAGCGATCAGTCGATATTGTCA 540 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 CTTATATATGATGACACTAATGTTTCCGGCGTATACTGGCCAGATCCTGATTACCAGTAC 600 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATGGA 660 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 GAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGATAGAAGCTTG 720 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 GGGATTAAAAGAAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGCTTGAAT 780 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AACTCAGATGGAACATGGACAATTTCATGGATTGCTCAACCTCAAACATGCATGACTCAT 840 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 GGTTTGTGTGGTCCATATGGAATCTGCCACTATTCACCTACACCAAGATGTTCATGCCCA 900 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 CCTGGTTATAAGATGAGGAATCCGGGTAACTGGACACAAGGTTGCAAGCCTATTGTCGAA 960 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACTGATTTTTGG 1020 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 GGTTCTGATCAACAACGTATTGAAAAGGTACCTTGGGAGGTGTGTTGGAACACTTGCATA 1080 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AGTGACTGCACATGCAAGGGATTTCAATACCAAGAAGGAAATGGTACATGCTATCCAAAA 1140 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TCTTTTCTCTTTAATGGAAGGACTTTCCCAACACCTTTTGTGCGAACGATGTATATCAAA 1200 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 CTTCCTTCAAGTTTGGATGTTTCAAAAAAACCCATTCCACAGTCTAGTATACATGATTAT 1260 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ACACTAAGTGGACTTGACTGTGATCATTTAAACACAATAACCACAGAGGCAGTTCGTAAC 1320 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ATGAATAAGATTGGTGGGGAGGAACCAAAATGGTTCTACTTCTATGGGTTTATCGGTGTG 1380 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TTTTTCATTGTTGAGGTTTTCTTCTTCGCATTTGCATGGTTCTTTGTCTTGAGGAAGGAG 1440 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ATGCGGTCATCTCAAGTATGGATAGCTGAGGAAGGCTACAGGGTGATGACTAGTCATTTC 1500 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 CGAATGTATAGTCATAGAGAGCTGGTTAAGGCAACTGAAAGGTTTAAACATGAGCTTGGA 1560 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TGGGGAGGTTCAGGAGTTGTCTATAAGGGAATATTGGATGACGATCGAGCAGTGGTCATA 1620 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AAAAAGTTGGAAAATGTCACGCAAAATAGGGAGGAGTTTCANGATGAGTTGCATGTTATT 1680 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 TCAAGAATCAACCATATGAACCTAGTAAGAATATATGGTTTTTGCTCAGAAAGATTCCAT 1740 consensus_13656#1 ------------------------------------------------------------ consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AGATTGCTGGTCTTAGAGTATGTTGAGAATGGATCATTGGCTAATGTACTGTTCAACAGT 1800 consensus_13656#1 -------------------------AGAATGGATCATTGGCTAATGTACTGTTCAACAGT 35 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTG 1860 consensus_13656#1 AAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGACTG 95 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 GCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAAC 1920 consensus_13656#1 GCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGAAC 155 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ATTTTGCTGGATGAGAATTTAGAACCTAAGATCACTGACTTTGGGTTGGCAAAGCTGCTT 1980 consensus_13656#1 ATTTTGCTGGATGAGAACTTAGAACCTAAGATCGCTGACTTTGGGTTGGCAAAGCTGCTT 215 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 AGTAGATCTGGCTCTAATCAAAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCT 2040 consensus_13656#1 AGTAGATCTGGCTCTAAGCAGAATGTTTCACGAGCACGAGGGACCATAGGTTACATTGCT 275 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 CCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTC 2100 consensus_13656#1 CCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAGTC 335 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 GTTCTTCTTGAGCTAGTGTCAGGAAGACGAGTCTTTGATTTAATCGTTGGAGAGGATAAG 2160 consensus_13656#1 GTTCTTCTTGAGCTAGTGTCAGGAAAACGAGTCTTTGATCTGATCATAGGAGAGGATAAG 395 consensus_13656#2 ------------------------------------------------------------ consensus_13656#0 ACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAA-GATGA-TTTGTTAT---AGATTGG 2215 consensus_13656#1 ACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAA-GATGA-TTTGTTAT---AGATTGG 450 consensus_13656#2 ----------------------AAGTGTTAATTAAAGATGAATTTGTTAATAAGGATTGG 38 * *** ***** ***** ******* ****** consensus_13656#0 ACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCA 2275 consensus_13656#1 ACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCA 510 consensus_13656#2 ACAATGAGAAATCATTGTGGTTACCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCA 98 *********************** ************************************ consensus_13656#0 ACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGC-TTGGAGGAAGATAGG 2334 consensus_13656#1 ACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGC-TTGGAAGAAGATAGG 569 consensus_13656#2 ACTACTTGCAA-CAAGAACTTTGGTAAAGTTGGCTGTGTCCTGCGTTGGAGGAAGATAGG 157 *********** *** **************************** ***** ********* consensus_13656#0 AAGAAAAGGCCAACAATGGAATCAATAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGA 2394 consensus_13656#1 AAGAAAAGGCCAACAATGGAATCAATAGTCGAGAGCCTCCTTTCAGTTGATTTAGCTAGA 629 consensus_13656#2 AAGAAAAGGCCCACAATGGAATCA-TAGTGGAGAGCCTCCTTTCAGTTGATTTAGCTAGA 216 *********** ************ **** ****************************** consensus_13656#0 AGTTAA-TAAAATAAT-AATGT-ACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTA 2451 consensus_13656#1 AGTTAA-TAAAATAAT-AATGT-ACC-AAGGGAGAATATTTATAATAT-GGAGTCCCTTA 684 consensus_13656#2 AGTTAAGTAAAATAATGAATGTGACCGAAGGGAGAATATTTATAATATTGGAGTCCCTTA 276 ****** ********* ***** *** ********************* *********** consensus_13656#0 GTGGTATGTTATTGCGAGGACCATACTAATTCTA-GAAGTCTTCATTTCCTAGGATTACT 2510 consensus_13656#1 GTGGTATGTTATTGCTAGGACTATACTAATTCTA-GAAGTCTTCATTTCCTAGGATCACC 743 consensus_13656#2 GTGGTATGTTATTGCGAGGACCATACTAATTCTACGAAGTCTTCATTTCCTAGGATTACT 336 *************** ***** ************ ********************* ** consensus_13656#0 GTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACTTAAAAAAAAAAG-GA------ 2563 consensus_13656#1 GTAATGTATATAAAGTTCTATATAATTGTGTGTCTTACTTATATCTTGTAA-ATTTTTCA 802 consensus_13656#2 GTAATGTGTATAACGTTCTATATAATTGTGTGTTTTACTTATATCTCGTAATGTTTTCCA 396 ******* ***** ******************* ******* * * consensus_13656#0 ------------------------------------------------------------ consensus_13656#1 TGTTATTTAGTAATGGTCTAATGG------------------------------------ 826 consensus_13656#2 TGTTATTTAGTAATGGTCTAATGGAACGGTGGTGGTATATTTTTCTAGTTTTTTTATATT 456 consensus_13656#0 ------------------------- consensus_13656#1 ------------------------- consensus_13656#2 GGCAAAAGTAATGCCAAAAAAAAAA 481 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||