These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13658#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2122 fasta sequence [CCCACTCGCTGTGGACTCGTCGTCTTCCTCCCGCCGCCGCCGCCTAGGGTTTCGCGCTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT---GGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAAT-----GGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC-CCTATTGATTTATGATATATGCAATTTATGCAAAAAAAAAGAAAAAGA] [+] EMBL AK067785 [CCCACTCGCTGTGGACTCGTCGTCTTCCTCCCGCCGCCGCCGCCTAGGGTTTCGCGCTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTTGCAGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAAT GGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC CCTATTGATTTATGATATATGCAAT ] [+] EMBL CB671462 [ GTTTCCCTTTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT GGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCATGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGC ] [+] EMBL CB671464 [ GTTTCGCGCTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT GGAGCTACTTCAGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCATGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCA ] [+] EMBL CB628065 [ TGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCTGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCATCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACGCTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGCGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGCCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTTGCAGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGAGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACACTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCCTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACAGGAGGTATACGGTGTGAGATGGCATCGGCTTATATCCGCTCGAAAGGTGAAGGCTTTGAGAATGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTG ] [+] EMBL CB653865 [ GTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT GGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGT ] [+] EMBL CF306977 [ CTCGCTCTCCGTTCGGCTCGTGAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGCTGGCAACCCCGCAAATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTGCAAAGTGTT GGAGCTACTTCGGACTCTGAAACAACCGCGGAGAGGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACAAGACACGGATTGGCAAGTTCCGTGCACCGAACGTGGAGACGCTGGATCCATAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACCGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAACGCTTTGAGAACGTATTTCAGCTGTATGGTGGCATTCAGAGATATCTGGAGCGATTCCCACATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGA ] [+] EMBL CB642111 [ GAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCAGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAATGGTAAGGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGC ] [-] EMBL CB671465 [ GCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC CCTATTGATTTATGATATATGCAATTTATGCAAAAAAAAGGA ] [-] EMBL CB671463 [ TGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACCGCCTATTGATTTATGATATATGCAATTTATGCAAAAAAAAAGA ] [-] EMBL CB653866 [ TGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC CCTATGGATTTATGATATATGCAATTTATGCAAAAAAAAAAAAAAAGA] [-] EMBL CF324675 [ TGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTAaaa ] [-] EMBL CF324819 [ CAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCNCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGAT ] consensusID : consensus_13658#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 873 fasta sequence [CCTCTGTTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCGTCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGATCCTCTTCAGTATCAGCAACAAACCGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGGTTCTCCCCAGGCGCAGCAATGGGAGCCTTGTTCTGCAGACAGCAGCAGAAGACATGGGGGTCCCTCAAATTAAGGGTGGGGAATTCTGGTCTGGGGTTTCCCCCCCATCATTAATGAATTTGACCGGGAGCCCAATTAAACCCCCTTCCCTTTATTGCTTTGGGGACTCTTAAGAATATTGACGGGCGGATAGCAAAACGGGGGAGGCCCGCAACCTCCGAATTAATTTGTTAAGAAATGTCGCTCTCTGTATTGGGGCATGAATTGGGCCCCATAAATTCTACTCCGGCGGCCCCTTTTTGATAAATAAAAAAGAATCTGTGCCACTTTTTTGAAAAAGGGTGGGAAAAAAGGAAAAGCTCTTGTTGGGAAGTTAACTATTAACCCCCTTTTGAGGATTAATATGGTTGGGATTGGTTCTTTTCTATAAAACAAAAACGGGGCGGNGGGGGGGGCCGGGGCCCCCNNNCCCCCTTCGTGNGGGGGTTTCTCCGCGCCCCCTGGCG] [+] EMBL CA757764 [CCTCTGTTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCGTCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGATCCTCTTCAGTATCAGCAACAAACCGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGGTTCTCCCCAGGCGCAGCAATGGGAGCCTTGTTCTGCAGACAGCAGCAGAAGACATGGGGGTCCCTCAAATTAAGGGTGGGGAATTCTGGTCTGGGGTTTCCCCCCCATCATTAATGAATTTGACCGGGAGCCCAATTAAACCCCCTTCCCTTTATTGCTTTGGGGACTCTTAAGAATATTGACGGGCGGATAGCAAAACGGGGGAGGCCCGCAACCTCCGAATTAATTTGTTAAGAAATGTCGCTCTCTGTATTGGGGCATGAATTGGGCCCCATAAATTCTACTCCGGCGGCCCCTTTTTGATAAATAAAAAAGAATCTGTGCCACTTTTTTGAAAAAGGGTGGGAAAAAAGGAAAAGCTCTTGTTGGGAAGTTAACTATTAACCCCCTTTTGAGGATTAATATGGTTGGGATTGGTTCTTTTCTATAAAACAAAAACGGGGCGGNGGGGGGGGCCGGGGCCCCCNNNCCCCCTTCGTGNGGGGGTTTCTCCGCGCCCCCTGGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13658#0 CCCACTCGCTGTGGACTCGTCGTCTTCCTCCCGCCGCCGCCGCCTAGGGTTTCGCGCTGA 60 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 GAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCG 120 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 GCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCG 180 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 ACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCC 240 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 GCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGG 300 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 AGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGG 360 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 CCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCT 420 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 CCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGC 480 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 AGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTG 540 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 TTGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATG 600 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 CGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGG 660 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 ATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGC 720 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 TCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGG 780 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 CATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTC 840 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 AGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTG 900 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 ACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTG 960 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 GTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGC 1020 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 TAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGA 1080 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 ACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAA 1140 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 TAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTC 1200 consensus_13658#1 ------------------------------------------------------------ consensus_13658#0 CCAGGAGTAATGGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCC 1260 consensus_13658#1 ----------------------------------------CCTCTGTTTGCATGGTTTCC 20 ****** ************* consensus_13658#0 GTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACA 1320 consensus_13658#1 GTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACA 80 ************************************************************ consensus_13658#0 TTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATC 1380 consensus_13658#1 TTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATC 140 ******************************* **************************** consensus_13658#0 CAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCAT 1440 consensus_13658#1 CAGATCACTGCTCTGGCAGATCTTCACTGCCGTCTGGCACACCAAAGAGAAAATACGCAT 200 ******************************* **************************** consensus_13658#0 GGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCAC 1500 consensus_13658#1 GGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCAC 260 ************************************************************ consensus_13658#0 CATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACC 1560 consensus_13658#1 CATTCGATCCTCTTCAGTATCAGCAACAAACCGATGGATTCGAGGAATCATACGCATACC 320 ******* *********************** **************************** consensus_13658#0 TTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCG 1620 consensus_13658#1 TTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGGTTCTCCCCAGGCG 380 ********************************************** ******* **** consensus_13658#0 CAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCA 1680 consensus_13658#1 CAGCAATGGGAGCCTTGTTCTGCAGACAGCAGCAGAAGACATGGGGGTCCCTCAAATTAA 440 ********* ****************************** ** ** *********** * consensus_13658#0 GGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGC 1740 consensus_13658#1 GGGTGGGGA-ATTCTGGTCTGGG-GTTTCCCCCCCATCATTAATGAATTTGACCGGGAGC 498 ** * **** ****** ***** * * ** ***** * *** ****** * **** consensus_13658#0 C-AATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCAT-GACAGGCAGAT 1798 consensus_13658#1 CCAATTAAACCCCCTTCCCTTTATTGCTTTGGGGACTCTTAAGAATATTGACGGGCGGAT 558 * ****** * *** ** *** ********** ***** **** ** *** *** *** consensus_13658#0 AGCAAA-CAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGT-T 1856 consensus_13658#1 AGCAAAACGGGGGAGGCCCGCAACCTCCGAATTAATTTGTTAAGAAATGTCGCTCTCTGT 618 ****** * *** * ** * *** ***** ***** ***** ********* * * consensus_13658#0 ATTGAG-CATGATATGGGCCATATAATTCCTACTC-GGCCGCCCTTTATTGATAAAATAA 1914 consensus_13658#1 ATTGGGGCATGAATTGGGCCCCATAAATTCTACTCCGGCGGCCCCTTTTTGATAAA-TAA 677 **** * ***** ****** **** * ****** *** **** ** ******** *** consensus_13658#0 AAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTA 1974 consensus_13658#1 AAAAGAATCTGTGCCACTTTTTTGAAAAAGGGTGGGAAAAAAGGAAAAGCTCTTGTTGGG 737 ** ** ***** * * *** ** *** * *** ** ** * ** * ****** consensus_13658#0 AGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGC 2034 consensus_13658#1 AAGTTAACTATTAACCCCCTTTTGAGGATTAATATGGTTGGGATTGGTTCTTTTCTATAA 797 * * * *** * *** ******* * ** ** * * *** * * ** consensus_13658#0 TGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACCCCTATTGATTTATGATATAT 2094 consensus_13658#1 AACAAAAACGGGGCGGNGGGGGGGGCCGGGGCCCCCNNNCCCCCTTCGTGNGGGGGTTTC 857 * ** * * ** * *** ** * * * consensus_13658#0 GCAATTTATGCAAAAAAAAAGAAAAAGA 2122 consensus_13658#1 TCCGCGCCCCCTGGCG------------ 873 * * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||