cluster # 13665

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Oryza sativa
cluster # 13665 cluster # 13665 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13665#0 length = 1727 sequences # 11

consensus_13665#1 length = 690 sequences # 1
consensus_13665#2 length = 354 sequences # 1

consensusID : consensus_13665#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1727
fasta sequence

                              [AGCAATCTCTCTTTCTACTAGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCCAAGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGGAGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTT-CTGGAGTTACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACAAATGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCTTATCTCTGGGTGCAGCAAAACTGTGTCGAATTATCT-CACGTATAACGGCCTTGATGGAACACACATTAATGTAAGCGAATTTGCAAGAGAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTATTGAACTTGGGACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAATGTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGAGCAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTGCATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTAACCAATTGTACCGGGGGGACCGAAGTGCTTAGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATGAAATTGGCTAAAAAAAGAGAAAATGACATGTATACATTCTCACAAGCAATTCACAAGTCCGGACGCGACTCCCAGTTGGGTGCCCGGGAGGGGGTCAAATCGGTGCTGACGTCAGCATGATGTCAGCGTCACGCATATGTGTAAAACCACTTTAAACTATTTTTTTTCTCTTAAATTACT]

[+] EMBL AK101384             [AGCAATCTCTCTTTCTACTAGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCAAAGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCACGAGCGGTGGAGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGGCCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGGGACGCTTAAACCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTT CTGGAGTTACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACAAATGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCTTATCTCTGGGTGCAGCAAAACTGTGTCGAATTATCT CACGTATAACGGCCTTGATGGAACACACATTAATGTAAGCGAATTTGCAAGAGAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTATTGAACTTGGGACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAATGTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGAGCAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTGCATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTAACCAATTGTACCGGGGGGACCGAAGTGCTTAGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATGAAATTGGCTAAAAAAAGAGAAAATGACATGTATACATTCTCACAAGCAATTCACAAGTCCGGACGCGACTCCCAGTTGGGTGCCCGGGAGGGGGTCAAATCGGTGCTGACGTCAGCATGATGTCAGCGTCACGCATATGTGTAAAACCACTTTAAACTATTTTTTTTCTCTTAAATTACT]
[+] EMBL CB639629             [          CTTTCTACTAGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCCAA CAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGGAGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCTATGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK062561             [                  TAGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCCAAGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGGAGGGATCTGGACATGCTCCCCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTT CTGGAGTTACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACAAATGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCTTATCTCTGGGTGCAGCAAAACTGTGTCGAATTATCT CACGTATAACGGCCTTGATGGAACACACATTAATGTAAGCGAATTTGCAAGAGAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTATTGAACTTGGGACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAATGTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGAGCAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTGCATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTAACCAATTGTACCGGGGGGACCGAAGTGCTTAGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATGAAATTGGCTAAAAAAAG                                                                                                                                                                   ]
[+] EMBL C28508               [                   AGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCCAAGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGGAGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C91786               [                        gtntgCTACCAGCGATTCTTCCCCTCCCACCGTCCAAGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGGAGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACAACATCGACGTCTTCAACCTNAACCGCCAGTTCCTNTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGTTGAAGTTGCTNCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTTAACAATNTTCCACAATTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA998255             [                                                                                                                                                                                                                                                       aggGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAATGGAATGAGGTTCATCCTGNGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTT CTGGAGTTACATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA999214             [                                                                                                                                                                                                                                                                    CAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGACAACACCTTGTTTTTGATGCAACATATGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA998903             [                                                                                                                                                                                                                                                                    CAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU082215             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           nGGNATTTCCTGAAGTTACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGTTTCAACAAATGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCTTATCTCTGGGTGCAGCAAAACTGTGTCGAATTATCT CACGTATAACGGCCTTGATGGAACACACATTAATGTAAGCGAATTTGCAAGAGAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTATTGAACTTGGGACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAATGTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGAGCAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTGCATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTAACCAATTGTACCGGGGGGACCGAAGTGCTTAGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATGAAATTGGCTAAAAA                                                                                                                                                                      ]
[+] EMBL AU082247             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACTGTGTCGANTTATCTCCACGTATNACGGCCTTGATGNAACCCACATTAATGTAACCGAATTTGCAAGAGAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTNTTGAACTTGGGACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCNCCCCAAGCTGCTAATGTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGAGCAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTGCATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTANCCAATTGTACCGGGGGGACCGAAGTGCTTAGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATGAAATTGGCTAAAAAAAGAGAAAATGACATGTATACATTCTCACAAaaa                                                                                                                                    ]
[+] EMBL BI811546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTGGACCTGGTACCCTTATTGAACTTGGGACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAATGTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGA CAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTGCATGTAACTGGAATGGCAGAAAAC ACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTAACC ATTGTACC GGGGGACCGAAGTGCTTAGAGATAAAATGCACACCACATTC AAACTGTTTATTTGTTTAAATGAAATTGGCTAAAAAAAGAGAAAAa                                                                                                                                                            ]




>consensus_13665#0
AGCAATCTCTCTTTCTACTAGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCCA
AGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGG
AGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCC
AGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGC
GGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTC
ATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAA
GATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGA
GTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAA
TTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTG
GCGTGTGGTTTCTTAGAGTATGACTCAGATGACAAGCCAATCCCTGAGACGCTTAAACCT
ATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGACA
ACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGT
ACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAA
TGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGG
ATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATATTCG
TTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACAAATGCAATTGTT
TCTGCTGCATGTGCGTTGGAAGCTCTTAAGCTTATCTCTGGGTGCAGCAAAACTGTGTCG
AATTATCTCACGTATAACGGCCTTGATGGAACACACATTAATGTAAGCGAATTTGCAAGA
GAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTATTGAACTTGGGACATCGACTACC
CTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAATGTCGAGGGCTAGC
GTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCTAGAGCAGATGACG
CGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGCACGCACGACTGTG
CATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCTGAGGAAGCTGCGT
GTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTCTTGATACTAGTTT
ATAGCTATGGCTTTCAAGAACTGAGAATTAACCAATTGTACCGGGGGGACCGAAGTGCTT
AGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATGAAATTGGCTAAAA
AAAGAGAAAATGACATGTATACATTCTCACAAGCAATTCACAAGTCCGGACGCGACTCCC
AGTTGGGTGCCCGGGAGGGGGTCAAATCGGTGCTGACGTCAGCATGATGTCAGCGTCACG
CATATGTGTAAAACCACTTTAAACTATTTTTTTTCTCTTAAATTACT

consensusID : consensus_13665#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence

                              [ATTCGGCANAGGNTTTCTTAGAGTATGACTCAGATGNACAAGCCAATGCCCCTGAGACGCTTAAACCTATGGTTGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGNACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACCAAATGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCCTAACCCCGGGTGCAGCAAAACTGTGTCGAATAATCCACGTANACGGCCTGATGGACACCCATAATGAAGCGAATTTCAAGGNGAAGCGCCTGATGNGNCCTGACCTATGACTNGGNANGGACCCNCAGGTCACAGAGCTTAGGGCCCAGGNNAANCGGGGATNGAAAACGNGGGGGANCCAAGGGGGCCTAGCCTAGAATTCGGCAACNGGGCCAGTTGGGCAAGGGG]

[+] EMBL AI096167             [ATTCGGCANAGGNTTTCTTAGAGTATGACTCAGATGNACAAGCCAATGCCCCTGAGACGCTTAAACCTATGGTTGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGGNACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGATCAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACCAAATGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCCTAACCCCGGGTGCAGCAAAACTGTGTCGAATAATCCACGTANACGGCCTGATGGACACCCATAATGAAGCGAATTTCAAGGNGAAGCGCCTGATGNGNCCTGACCTATGACTNGGNANGGACCCNCAGGTCACAGAGCTTAGGGCCCAGGNNAANCGGGGATNGAAAACGNGGGGGANCCAAGGGGGCCTAGCCTAGAATTCGGCAACNGGGCCAGTTGGGCAAGGGG]




>consensus_13665#1
ATTCGGCANAGGNTTTCTTAGAGTATGACTCAGATGNACAAGCCAATGCCCCTGAGACGC
TTAAACCTATGGTTGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATAC
CTGGGNACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTT
CCCTTATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCAT
TTGATCAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACAT
ATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTT
ACATATTCGTTTACCCAGGGTGTTGTCAAGAATATCATCCCAGCCATTGCTTCAACCAAA
TGCAATTGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCCTAACCCCGGGTGCAGCAA
AACTGTGTCGAATAATCCACGTANACGGCCTGATGGACACCCATAATGAAGCGAATTTCA
AGGNGAAGCGCCTGATGNGNCCTGACCTATGACTNGGNANGGACCCNCAGGTCACAGAGC
TTAGGGCCCAGGNNAANCGGGGATNGAAAACGNGGGGGANCCAAGGGGGCCTAGCCTAGA
ATTCGGCAACNGGGCCAGTTGGGCAAGGGG

consensusID : consensus_13665#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence

                              [GAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATATTCGTTTACCCAGGTGTCTCTCTAATCTTGTGCCTTCTCTGCTAGTGATTTAATGCGAATCTTGTACTCTGGTAATAATGCATGAGTCCTATAATCACACCAACTTCAACCTTTTTTTTGGGAAATTCTTTAAGATTGACTGAGATGATAAACGATCCAACATTGGTTAAAGAAAATGTTAGACTCAACAGTATGTGAATAGCATTCTCTCTGCACAACAAGTTGACTCTCATGGTGATTCTATCTTACTACAAATAA]

[+] EMBL CF324314             [GAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATATTCGTTTACCCAGGTGTCTCTCTAATCTTGTGCCTTCTCTGCTAGTGATTTAATGCGAATCTTGTACTCTGGTAATAATGCATGAGTCCTATAATCACACCAACTTCAACCTTTTTTTTGGGAAATTCTTTAAGATTGACTGAGATGATAAACGATCCAACATTGGTTAAAGAAAATGTTAGACTCAACAGTATGTGAATAGCATTCTCTCTGCACAACAAGTTGACTCTCATGGTGATTCTATCTTACTACAAATAA]




>consensus_13665#2
GAAACCTTTTGATGCTGATGATGCAGAACATATGCAGTGGATTTACTCAGAGGCTTTAAA
GAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATATTCGTTTACCCAGGTGTCTCTCTA
ATCTTGTGCCTTCTCTGCTAGTGATTTAATGCGAATCTTGTACTCTGGTAATAATGCATG
AGTCCTATAATCACACCAACTTCAACCTTTTTTTTGGGAAATTCTTTAAGATTGACTGAG
ATGATAAACGATCCAACATTGGTTAAAGAAAATGTTAGACTCAACAGTATGTGAATAGCA
TTCTCTCTGCACAACAAGTTGACTCTCATGGTGATTCTATCTTACTACAAATAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13665#0      AGCAATCTCTCTTTCTACTAGGGTCTCTTCTACCAGCGATTCTTCCCCTCCCACCGTCCA 60
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      AGCAGGGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGG 120
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      AGGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCC 180
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      AGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGC 240
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTC 300
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      ATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAA 360
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGA 420
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAA 480
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      TTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTG 540
consensus_13665#1      ----------------------------------------------------ATTC---G 5
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GCGTGTGGTTTCTTAGAGTATGACTCAGATGA-CAAGCCAAT--CCCTGAGACGCTTAAA 597
consensus_13665#1      GCANAGGNTTTCTTAGAGTATGACTCAGATGNACAAGCCAATGCCCCTGAGACGCTTAAA 65
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      CCTATGGTCGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGG 657
consensus_13665#1      CCTATGGTTGATGGTGGGACTGAAGGTTTCAAAGGTCATGCTAGAGTCATCATACCTGGG 125
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      A-CAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTT 716
consensus_13665#1      NACAACACCTTGTTTTGAATGCAACATATGGCTTTTCCCTCCCCAGGTCAAATTTCCCTT 185
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      ATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGAT 776
consensus_13665#1      ATGTACACTTGCTGAGACTCCGAGAACTGCAGCTCATTGCATTGAATATGCTCATTTGAT 245
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      CAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCA 836
consensus_13665#1      CAAATGGAATGAGGTTCATCCTGGGAAACCTTTTGATGCTGATGATGCAGAACATATGCA 305
consensus_13665#2      ------------------------GAAACCTTTTGATGCTGATGATGCAGAACATATGCA 36
                                               ************************************

consensus_13665#0      GTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATA 896
consensus_13665#1      GTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATA 365
consensus_13665#2      GTGGATTTACTCAGAGGCTTTAAAGAGAGCAGAACTTTTTGGTATTTCTGGAGTTACATA 96
                       ************************************************************

consensus_13665#0      TTCGTTTACCCAGGGTGTTGTCAAGA---ATATCATCCCAGCCATTGCTTCAAC-AAA-- 950
consensus_13665#1      TTCGTTTACCCAGGGTGTTGTCAAGA---ATATCATCCCAGCCATTGCTTCAACCAAA-- 420
consensus_13665#2      TTCGTTTACCCAGGTGTCTCTCTAATCTTGTGCCTTCTCTGCTAGTGATTTAATGCGAAT 156
                       **************    * ** *      *  * ** * ** * ** ** **    *  

consensus_13665#0      --TGCAAT-TGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCTTATCTCTGGGTGCAG 1007
consensus_13665#1      --TGCAAT-TGTTTCTGCTGCATGTGCGTTGGAAGCTCTTAAGCCTAACCCCGGGTGCAG 477
consensus_13665#2      CTTGTACTCTGGTAATAATGCATGAGTCCTATAATCACACCAACTTCAACCTTTTTTTTG 216
                         ** * * ** *  *  ****** *   *  ** * *   * * *    *    *   *

consensus_13665#0      CAAAACTGTGTCGAATTATCTCACGTATAACGGCCTTGATGGAACACACATTAATGTAAG 1067
consensus_13665#1      CAAAACTGTGTCGAATAATC-CACGTANA-CGGCCT-GATGGA-CACCCAT-AATG-AAG 531
consensus_13665#2      GGAAATTCTTTAAGATTGACTGAGATGAT--------AAACGATCCAACATTGGTTAAAG 268
                         *** * * *   **   *  *  *            *  ** *   ***   *  ***

consensus_13665#0      CGAATTTGCAAGAGAGAAAGACTGCCTTGTATGTGGACCTGGTACCCTTATTGAACTTGG 1127
consensus_13665#1      CGAATTT-CAAGGNGAAGCGCCTG------ATGNGN-CCTGA----CCTAT--GACTNGG 577
consensus_13665#2      AAAATGT--TAGACTCAACAGT--------ATGTGA--ATAGCATTCTCTCT--GCACAA 314
                         *** *   **    *             *** *    *      *        *    

consensus_13665#0      GACATCGACTACCCTCTCAGAGTTCATCAAGATGCTTGAAGAGCACCCCAAGCTGCTAAT 1187
consensus_13665#1      NANG--GACC-----CNCAGG-----TCACAGAGCTTAGGGCCCAGGNNAANCGG---GG 622
consensus_13665#2      CAAGTTGACTC---------------TCATGGTGATTCTATCTTACTACAAATAA----- 354
                        *    ***                 ***    * **       *    **         

consensus_13665#0      GTCGAGGGCTAGCGTAACACACGAAGGCGATAACCTCTACATGCAGGCACCTGAAGTCCT 1247
consensus_13665#1      ATNGAAAACGNGGGGGANCCAAGGGGGCC-TAGCCT--AGAATTCGGCAACNGGGCCAGT 679
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      AGAGCAGATGACGCGACCAAACCTGGGTGTCCCAATGTTTGAGCTACTCAAAGGAGCTGC 1307
consensus_13665#1      TGGGCAAGGGG------------------------------------------------- 690
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      ACGCACGACTGTGCATGTAACTGGAATGGCAGAAAACAACGGGAAGAAAGTATCCTCTCT 1367
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GAGGAAGCTGCGTGTTACTTTCAAGGGCGTCGAGGAATCTTCGAAAATGGATGAGAGTTC 1427
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      TTGATACTAGTTTATAGCTATGGCTTTCAAGAACTGAGAATTAACCAATTGTACCGGGGG 1487
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GACCGAAGTGCTTAGAGATAAAATGCACACCACATTCAAAACTGTTTATTTGTTTAAATG 1547
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      AAATTGGCTAAAAAAAGAGAAAATGACATGTATACATTCTCACAAGCAATTCACAAGTCC 1607
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      GGACGCGACTCCCAGTTGGGTGCCCGGGAGGGGGTCAAATCGGTGCTGACGTCAGCATGA 1667
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------
                                                                                   

consensus_13665#0      TGTCAGCGTCACGCATATGTGTAAAACCACTTTAAACTATTTTTTTTCTCTTAAATTACT 1727
consensus_13665#1      ------------------------------------------------------------
consensus_13665#2      ------------------------------------------------------------