These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13680#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1592 fasta sequence [CCCTCGCGCAGCTCTCACTCTCTCCACCGCCGCCGCCTTCGCCTTCGCCTTCGCCTTCGCCGCCGCAACTCTCCCTCCGCCGGAGTCGGCGTCGGCGTCCGCCGCAAGCAAGCTGAGCGATCATGTCTTCTATGGAATCATCGTACCTCCCTGCAACCACTGAGTCAATAGCGAAGGCTCAGGAAGCTAAAGATGCTTCGGAGTCCATTTCAATCCTTTACCGTGTTCTACAAGACCCGTCATCTTCTGCAGAGGCTCTGAGAACCAAGGAACTTGCAATTACAAATCTTACCAACTACCTCACTAAAGAGAACCGGGCTGAGGAGCTGCGAAACCTTCTAACCCAGCTCAGGCCTTTTTTCTCGTTGATTCCCAAGGCAAAGACTGCAAAAATTGTCCGTGGAATCATCGATGCTGTTGCCAAGATACCAGGAACATCTGAACTTCAGATCTCACTCTGCAAGGAGATGGTTGAATGGACCCGTGCTGAGAAGCGGACATTCCTCAGGCAGCGTGTGGAGGCAAGGCTAGCAGCCCTTCTGTTAGAGAATCAGGAGTACACTGAAGCGCTTACTCTCCTTACTGGTCTTATCAAGGAAGTCAGGAGGCTTGATGACAAGTTGCTTCTTGTGGACATTGACCTTCTGGAGAGTAAACTCCACTTTTCTCTGAGAAACCTGCCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAGCGAATGCCATTTATGTTCCACCAGCACAGCAGGGTACTATTGATCTGCAGAGTGGAATCCTTCATGCTGAAGAAAAGGACTACAAGACTGCATACAGCTACTTTTTTGAAGCATTTGAAGCATTCAGTGCCCTAGAAGACCCAAAGGCGATCTTCAGCTTGAAGTACATGCTCCTGTGCAAGATTATGGTTAACCAAGCTGATGATGTCGCAGGAATAATCTCATCTAAGGCTGGTTTGAAGTATCTGGGTCCTGATGTTGATGCTATGAAAGCTGTTGCTGATGCCTACTCAAAAAGATCTCTCAAGTACTTTGAAACTGCCCTTCGTGATTACAAGTCTCAACTGGAGGAGGACCCTATTGTGCACAGGCATCTTTCATCTCTGTATGATACCCTCCTGGAGCAGAACCTGTGCAGGCTGATTGAGCCCTACTCAAGGGTGGAGATTGCACATATTGCGGAGATGATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTCCACAGACATTTAATCCTGCATATTGACATTTTGTTCTGCATGTTGGTCTCTCCTAGCTAAAAAAGGTACCCTGTCTTGAATGCGAACAAATACAATTTGCTG-TTTCTTTAAAAAAA] [+] EMBL AK064788 [CCCTCGCGCAGCTCTCACTCTCTCCACCGCCGCCGCCTTCGCCTTCGCCTTCGCCTTCGCCGCCGCAACTCTCCCTCCGCCGGAGTCGGCGTCGGCGTCCGCCGCAAGCAAGCTGAGCGATCATGTCTTCTATGGAATCATCGTACCTCCCTGCAACCACTGAGTCAATAGCGAAGGCTCAGGAAGCTAAAGATGCTTCGGAGTCCATTTCAATCCTTTACCGTGTTCTACAAGACCCGTCATCTTCTGCAGAGGCTCTGAGAACCAAGGAACTTGCAATTACAAATCTTACCAACTACCTCACTAAAGAGAACCGGGCTGAGGAGCTGCGAAACCTTCTAACCCAGCTCAGGCCTTTTTTCTCGTTGATTCCCAAGGCAAAGACTGCAAAAATTGTCCGTGGAATCATCGATGCTGTTGCCAAGATACCAGGAACATCTGAACTTCAGATCTCACTCTGCAAGGAGATGGTTGAATGGACCCGTGCTGAGAAGCGGACATTCCTCAGGCAGCGTGTGGAGGCAAGGCTAGCAGCCCTTCTGTTAGAGAATCAGGAGTACACTGAAGCGCTTACTCTCCTTACTGGTCTTATCAAGGAAGTCAGGAGGCTTGATGACAAGTTGCTTCTTGTGGACATTGACCTTCTGGAGAGTAAACTCCACTTTTCTCTGAGAAACCTGCCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAGCGAATGCCATTTATGTTCCACCAGCACAGCAGGGTACTATTGATCTGCAGAGTGGAATCCTTCATGCTGAAGAAAAGGACTACAAGACTGCATACAGCTACTTTTTTGAAGCATTTGAAGCATTCAGTGCCCTAGAAGACCCAAAGGCGATCTTCAGCTTGAAGTACATGCTCCTGTGCAAGATTATGGTTAACCAAGCTGATGATGTCGCAGGAATAATCTCATCTAAGGCTGGTTTGAAGTATCTGGGTCCTGATGTTGATGCTATGAAAGCTGTTGCTGATGCCTACTCAAAAAGATCTCTCAAGTACTTTGAAACTGCCCTTCGTGATTACAAGTCTCAACTGGAGGAGGACCCTATTGTGCACAGGCATCTTTCATCTCTGTATGATACCCTCCTGGAGCAGAACCTGTGCAGGCTGATTGAGCCCTACTCAAGGGTGGAGATTGCACATATTGCGGAGATGATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTCCACAGACATTTAATCCTGCATATTGACAT ] [+] EMBL CF322985 [ GGACATTCCTCAGGCAGCGTGTGGAGGCAAGGCTAGCAGCCCTTCTGTTAGAGAATCAGGAGTACACTGAAGCGCTTACTCTCCTTACTGGTCTTATCAAGGAAGTCAGGAGGCTTGATGACAAGTTGCTTCTTGTGGACATTGACCTTCTGGAGAGTAAACTCCACTTTTCTCTGAGAAACCTGCCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAGCGAATGCCATTTATGTTCCACCAGCACAGCAGGGTACTATTGATCTGCAGAGTGGAATCCTTCATGCTGAAGAAAAGGACTACAAGACTGCATACAGCTACTTTTTTGAAGCATTTGAAGCATTCAGTGCCCTAGAAGACCCAAAGGCGATCTTCAGCTTGAAGTACATGCTCCTGTGCAAGATTATGGTTAACCAAGCTGATGATGTCGCAGGAATAATCTCATCTAAGGCTGGTTTGAAGTATCTGGGTCCTGATGTTGATGCTATGAAAGCTGTTGCTGATGCCTACTCAAAAAGATCTCTCAAGTACTTTGAAACTGCCCTTCGTGATTACAAGTCTCAACTGGAGGAGGACCCTATTGTGCACAGGCATCTTTCATCTCTGTATG ] [+] EMBL AA750171 [ CTGGTCTTATCAAGGAAGTCAGGAGGCTTGATGACAAGTTGCTTCTTGTGGACATTGACCTTCTGGAGAGTAAACTCCACTTTTCTCTGAGAAACCTGCCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAGCGAAT CCATTTATGTTCCACCAGCACAGCAGGGTACTAT ] [+] EMBL AK061617 [ CTATGAAAGCTGTTGCTGATGCCTACTCAAAAAGATCTCTCAAGTACTTTGAAACTGCCCTTCGTGATTACAAGTCTCAACTGGAGGAGGACCCTATTGTGCACAGGCATCTTTCATCTCTGTATGATACCCTCCTGGAGCAGAACCTGTGCAGGCTGATTGAGCCCTACTCAAGGGTGGAGATTGCACATATTGCGGAGATGATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTCCACAGACATTTAATCCTGCATATTGACAT ] [+] EMBL CB681139 [ TTTCATCTCTGTATGATACCCTCCTGGAGCAAAACCTGTGCAGGCTGATTGAGCCCTACTCAAGGGTGGAGATTGCACATATTGCGGACATGATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCTCAGATGATCCTTGACAAGAAGTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGACGCAATCTTCCCTGCTACACTTGAAACTATTTCAGATGTTGGGAAGGTCGTCAACAGTCTTTACATGAGGGCTGCCAAGATCATGGCTTAAATGCCGAAATGTCTTTACACCCATGTGCTAGTTATGTTGGCT ] [+] EMBL AB070260 [ CAGATGATCCTTGACAAGAAGTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTCCACAGACATTTAATCCTGCATATTGACATTTTGTTCTGCATGTTGGTCTCTCCTAGCTAAAAAAGGTACCCTGTCTTGAATGCGAACAAATACAATTTGCTG TTTCTTTAAAAAAA] [+] EMBL OS1087A [ CAGATGATCCTTGACAAGAAGTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTCCACAGACATTTAATCCTGCATATTGACATTTTGTTCTGCATGTTGGTCTCTNCTAGCTAAAAAAGGTACCCTGTNTTGAATGCGAACAAATACAATTTGCTGTTTTCTT ] [+] EMBL C98202 [ GGTGNTGGCTGCCTCATTATCTTTGAGGATCCCAAGNCCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTCCACAGACATTTAATCCTGCATATTGACATTTTGTTCTGCATGTTGGTCTCTCCTAGCTAAAAAAGGTACCCTGTCTTGAATGCGAACAAATACAATTTGCTG TTTCTTTAAAAAAA] consensusID : consensus_13680#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 862 fasta sequence [ACCTCCTCCGACCTCGCCTCGTCCACTCCACCACGCCGCCGAAAGCCGCAACTCTCCACTGCCGGCTCGGCGTCGGCGTCCGAGACCGAGTAGTAATCCACAGATCTCCTCCTCCTGTTCTTCTCCTCCAAGAAAGAAATCTTGAAAGCCCCCCAACACCAGCCGACCCCTAACTCGATCTCGTCTCCGTATATACACTGATCTCCCTCCCGCCGCGAGTGTAGCAGCAGCTCCGCCGCCGCGAGCGATCATGTCTTCTATGGAATCATCTTGCCTTCCTGCAACCACTGAGTCAATAGCGAAGGCTCAGGAAGCTAAAGACGCTTCGGAGTCCATTTCAATCCTTTACCGTGTTCTACAAGACCCGTCATCTTCTGCAGAGGCTCTGAGAACCAAGGAACTTGCAATTACAAATCTTACCAACTACCTCACTAAAGAGAACCGGGCTGAGGAGCTGCGAAACCTTCTAACCCAGCTCAGGCCTTTTTTCTCGTTGATTCCCAAGGCAAAGACTGCAAAAATTGTCCGTGGAATCATCGATGCTGTTGCCAAGATAATAGGAACATCTGAACTTCAGATCTCACTCTGCAAGGAGATGGTTGAATGGACCCATGCTGAGAAGCGGACATTCCTTAGGCAGCGTGTGGAGGCAAGGCTAGCAGCCCTTCTGNTAGAGAATCAGGAGTACACTGATGCTCTTACTCTCCTTACTGATCNTATCAAGGAAGTCAGGAGGCTTGATGACAAGTTGCTTCTTGNGGACATTGATCTTCTGGAGAGTAAACTCCACTTTTCTCTGNAAAAACTGNCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAGCGAATGGCCNTTTA] [+] EMBL CA767150 [ACCTCCTCCGACCTCGCCTCGTCCACTCCACCACGCCGCCGAAAGCCGCAACTCTCCACTGCCGGCTCGGCGTCGGCGTCCGAGACCGAGTAGTAATCCACAGATCTCCTCCTCCTGTTCTTCTCCTCCAAGAAAGAAATCTTGAAAGCCCCCCAACACCAGCCGACCCCTAACTCGATCTCGTCTCCGTATATACACTGATCTCCCTCCCGCCGCGAGTGTAGCAGCAGCTCCGCCGCCGCGAGCGATCATGTCTTCTATGGAATCATCTTGCCTTCCTGCAACCACTGAGTCAATAGCGAAGGCTCAGGAAGCTAAAGACGCTTCGGAGTCCATTTCAATCCTTTACCGTGTTCTACAAGACCCGTCATCTTCTGCAGAGGCTCTGAGAACCAAGGAACTTGCAATTACAAATCTTACCAACTACCTCACTAAAGAGAACCGGGCTGAGGAGCTGCGAAACCTTCTAACCCAGCTCAGGCCTTTTTTCTCGTTGATTCCCAAGGCAAAGACTGCAAAAATTGTCCGTGGAATCATCGATGCTGTTGCCAAGATAATAGGAACATCTGAACTTCAGATCTCACTCTGCAAGGAGATGGTTGAATGGACCCATGCTGAGAAGCGGACATTCCTTAGGCAGCGTGTGGAGGCAAGGCTAGCAGCCCTTCTGNTAGAGAATCAGGAGTACACTGATGCTCTTACTCTCCTTACTGATCNTATCAAGGAAGTCAGGAGGCTTGATGACAAGTTGCTTCTTGNGGACATTGATCTTCTGGAGAGTAAACTCCACTTTTCTCTGNAAAAACTGNCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAGCGAATGGCCNTTTA] consensusID : consensus_13680#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence [CGATTTTCGAGGTCGAGGTCCATGTTACTTCGCCAATATTGTGGTTACCCAACCGAATCGGTTACCGGAGATAGTGTGTTCTAAGGCGGGTTTAAGTAGTCTGGGTCCTAATGTTGGTAATATGAAAGCGGTCGCTGATGCGTACTCAGAAAGATCTCTCAAGGTCCTTGGAAAGTGCCCTTCGTGATTACAAGTTTCAACTGGAGGAGGACCCTATTGTGGGCAGGCATCTTTTATCTCTGTATGATACCCTCCTGGAGCAGAACCTGTGCAGGCTGAGTGAGCCCTACTCAAGGGTGGAGATTGCCCATATTGCGGAGATGGTTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAACTTTGGATCAAGGTGCTGGCTGCCTCATTACCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCTGTTGGTCTCCACAGACATTTAATCCTGCATATTGACATTTTGTTTTGCAAAAAAAAAAAAAA] [-] EMBL CA763520 [CGATTTTCGAGGTCGAGGTCCATGTTACTTCGCCAATATTGTGGTTACCCAACCGAATCGGTTACCGGAGATAGTGTGTTCTAAGGCGGGTTTAAGTAGTCTGGGTCCTAATGTTGGTAATATGAAAGCGGTCGCTGATGCGTACTCAGAAAGATCTCTCAAGGTCCTTGGAAAGTGCCCTTCGTGATTACAAGTTTCAACTGGAGGAGGACCCTATTGTGGGCAGGCATCTTTTATCTCTGTATGATACCCTCCTGGAGCAGAACCTGTGCAGGCTGAGTGAGCCCTACTCAAGGGTGGAGATTGCCCATATTGCGGAGATGGTTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAACTTTGGATCAAGGTGCTGGCTGCCTCATTACCTTTGAGGATCCCAAGACCGAGGCAATCTTCCCTGCTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAAATGCCAAAATGTCTTTACAGTCATGTGCTAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCTGTTGGTCTCCACAGACATTTAATCCTGCATATTGACATTTTGTTTTGCAAAAAAAAAAAAAA] consensusID : consensus_13680#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence [GGACCTATTGTGCACAGCATCTTTCATCTCTGTATGATACCTCCTGGGACAGAACCTTGTCAGGCTGATTGACCCGTACGCAAGGGTGGAGATTGCACATATCGCGGAGATGATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAAATCTCGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCACATCTTCCCTGCTACACTTGAAACTATTTCGAATGTTGGGAAGGTCGTTGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAATGTCTTTACAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTTCATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTAAAGAAAAGGTACCCTCTTGAATGCGAACAAATACATTTGGTGTTTCTTACTTCGTATGGTGCAACTGTGCTAGTACCATAAACATAACCTGATGCCTAGGTTATATTTGTTATGTCAACTTATTTTGTCTTTAATGTCAGGCTAGCTTATTTAAAAAA] [+] EMBL BI812878 [GGACCTATTGTGCACAGCATCTTTCATCTCTGTATGATACCTCCTGGGACAGAACCTTGTCAGGCTGATTGACCCGTACGCAAGGGTGGAGATTGCACATATCGCGGAGATGATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAAGTTTGCAGGAAATCTCGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGACCGAGGCACATCTTCCCTGCTACACTTGAAACTATTTCGAATGTTGGGAAGGTCGTTGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAATGTCTTTACAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTTCATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTAAAGAAAAGGTACCCTCTTGAATGCGAACAAATACATTTGGTGTTTCTTACTTCGTATGGTGCAACTGTGCTAGTACCATAAACATAACCTGATGCCTAGGTTATATTTGTTATGTCAACTTATTTTGTCTTTAATGTCAGGCTAGCTTATTTAAAAAA] consensusID : consensus_13680#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 265 fasta sequence [CACTTGAAACTATTTCGAATGTTGGGAAGGTCATTGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAATGTCTTTACAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTTCATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTAAAGAAAAGGTACCCTCTTGAATGCCAACAAATACAATTTGGTGTTAAAAAAAAAAAAAAAAAA] [+] EMBL CF327212 [CACTTGAAACTATTTCGAATGTTGGGAAGGTCATTGACAGTCTTTACATGAGGTCTGCCAAGATCATGGCTTAATGTCTTTACAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTTCATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTAAAGAAAAGGTACCCTCTTGAATGCCAACAAATACAATTTGGTGTTAAAAAAAAAAAAAAAAA ] [-] EMBL CF327211 [ ACTTGAAACTATTTCGAATGTTGGGAAGGTCATTGACAGTCTTTACATGAGGTTTGCCAAGATCATGGCTTAATGTCTTTACAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTTCATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTAAAGAAAAGGTACCCTTTTGAATGCCAACAAATACAATTTGGTGTTAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 CCCTCGCGCAGCTCTCACTCTCTCCACCGCCGCCGCCTTCGCCTTCGCCTTCGCCTTCGC 60 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 CGCCGCAACTCTCCCTCCGCCGGAGTCGGCGTCGGCGTCCGCCGCAAGCAAGCTGAGCGA 120 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 TCATGTCTTCTATGGAATCATCGTACCTCCCTGCAACCACTGAGTCAATAGCGAAGGCTC 180 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 AGGAAGCTAAAGATGCTTCGGAGTCCATTTCAATCCTTTACCGTGTTCTACAAGACCCGT 240 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 CATCTTCTGCAGAGGCTCTGAGAACCAAGGAACTTGCAATTACAAATCTTACCAACTACC 300 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 TCACTAAAGAGAACCGGGCTGAGGAGCTGCGAAACCTTCTAACCCAGCTCAGGCCTTTTT 360 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 TCTCGTTGATTCCCAAGGCAAAGACTGCAAAAATTGTCCGTGGAATCATCGATGCTGTTG 420 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 CCAAGATACCAGGAACATCTGAACTTCAGATCTCACTCTGCAAGGAGATGGTTGAATGGA 480 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 CCCGTGCTGAGAAGCGGACATTCCTCAGGCAGCGTGTGGAGGCAAGGCTAGCAGCCCTTC 540 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 TGTTAGAGAATCAGGAGTACACTGAAGCGCTTACTCTCCTTACTGGTCTTATCAAGGAAG 600 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 TCAGGAGGCTTGATGACAAGTTGCTTCTTGTGGACATTGACCTTCTGGAGAGTAAACTCC 660 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 ACTTTTCTCTGAGAAACCTGCCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGCAG 720 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 CGAATGCCATTTATGTTCCACCAGCACAGCAGGGTACTATTGATCTGCAGAGTGGAATCC 780 consensus_13680#1 ------------------------------------------------------------ consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 TTCATGCTGAAGAAAAGGACTACAAGACTGCATACAGCTACTTTTTTGAAGCATTTGAAG 840 consensus_13680#1 --------------------------------------ACCTCCTCCGACCTCGCCTCGT 22 consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 --------------------------CGATTTTCGAGGTCGAGGTCCATGTTA-CTTCGC 33 consensus_13680#0 CATTCAGTGCCCTAGAAGACCCAAAGGCGATCTTCAGCTTGAAGTACATGCTC-CTGTGC 899 consensus_13680#1 CCACTCCACCACGCCGCCGAAAGCCGCAACTCTCCACTGCCGGCTCGGCGTCGGCGTCCG 82 consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 CAATATTGTGGTTACCCAACCGAATCGGTTACCGGAGATAGTGTGTTCTAAGGCGGGTTT 93 consensus_13680#0 -AAGATTATGGTTAACCAAGCTGATGATGTCGCAGGAATAATCTCATCTAAGGCTGGTTT 958 consensus_13680#1 AGACCGAGTAGTAATCCACAGATCTCCTCCTCCTGTTCTTCTCCTCCAAGAAAGAAATCT 142 consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 AAGTAGTCTGGGTCCTAATGTTGGTAATATGAAAGCGGTCGCTGATGCGTACTCAGAAAG 153 consensus_13680#0 GAAGTATCTGGGTCCTGATGTTGATGCTATGAAAGCTGTTGCTGATGCCTACTCAAAAAG 1018 consensus_13680#1 TGAAAGCCCCCCAACACCAGCCGACCCCTAACTCGATCTCGTCTCCGTATATACACTGAT 202 consensus_13680#3 ------------------------------------------------------------ consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 ATCTCTCAAGGTCCTTGGAAAGTG-----CCCTTCGTGATTACAAGTTTCAACTGGAGGA 208 consensus_13680#0 ATCTCTCAAG-TACTTTGAAACTG-----CCCTTCGTGATTACAAGTCTCAACTGGAGGA 1072 consensus_13680#1 CTCCCTCCCGCCGCGAGTGTAGCAGCAGCTCCGCCGCCGCGAGCGATCATGTCTTCTATG 262 consensus_13680#3 -GGACCTATTGTGCACAG-CATCTTTCATCTCTGTATGATACC-TCCTGGGAC---AGAA 54 consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 GGACCCTATTGTGGGCAGGCATCTTTTATCTCTGTATGATACCCTCCTGGAGC---AGAA 265 consensus_13680#0 GGACCCTATTGTGCACAGGCATCTTTCATCTCTGTATGATACCCTCCTGGAGC---AGAA 1129 consensus_13680#1 GAATCATCTTGCCTTCCTGCAACCACTGAGTCAATAGCGAAGGCTCAGGAAGCTAAAGAC 322 consensus_13680#3 CCTTGTCAGGCTGATTGACCCGTACGCAAGGGTG---GAGATTGCACATATCGCGGAGAT 111 consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 CCTGTGCAGGCTGAGTGAGCCCTACTCAAGGGTG---GAGATTGCCCATATTGCGGAGAT 322 consensus_13680#0 CCTGTGCAGGCTGATTGAGCCCTACTCAAGGGTG---GAGATTGCACATATTGCGGAGAT 1186 consensus_13680#1 GCTTCGGAGTCCATTTCAATCCTTTACCGTGTTCTACAAGACCCGTCATCTTCTGCAGAG 382 consensus_13680#3 GATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAA 171 consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 GGTTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAA 382 consensus_13680#0 GATTGAGTTGCCAGTTGATCATGTTGAGAAGAAGCTGTCGCAGATGATCCTTGACAAGAA 1246 consensus_13680#1 GCTCTGAGAACCAAG-GAACTTGCAATTACAAATCTTACCAACTACCTCACTAAAGAGAA 441 consensus_13680#3 GTTTGCAGGAAATCTCGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGAC 231 consensus_13680#4 ------------------------------------------------------------ consensus_13680#2 GTTTGCAGGAACTTTGGATCAAGGTGCTGGCTGCCTCATTACCTTTGAGGATCCCAAGAC 442 consensus_13680#0 GTTTGCAGGAACTCTGGATCAAGGTGCTGGCTGCCTCATTATCTTTGAGGATCCCAAGAC 1306 consensus_13680#1 CCGGGCTGAGGAGCTGCGAAACCTTCTAACCCAGCTCAGGCCTTTTTTCTCGTTGATTCC 501 consensus_13680#3 CGAGGCACATCTTCCCTG--CTACACTTGAAACTATTTCGAATGTTGGGAAGGTCGTTGA 289 consensus_13680#4 -----------------------CACTTGAAACTATTTCGAATGTTGGGAAGGTCATTGA 37 consensus_13680#2 CGAGGCA-ATCTTCCCTG--CTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGA 499 consensus_13680#0 CGAGGCA-ATCTTCCCTG--CTACACTTGAAACTATTTCAAATGTTGGGAAGGTCGTCGA 1363 consensus_13680#1 CAAGGCAAAGACTGCAAAAATTGTCCGTGGAATCATCGATGCTGTTGCCAAGATAATAGG 561 * ** ** ** ***** *** * * * consensus_13680#3 CA-GTCTTTACATGAGGTCTGCC-----AAGATCATGGCTTAA---------TGTCTTTA 334 consensus_13680#4 CA-GTCTTTACATGAGGTCTGCC-----AAGATCATGGCTTAA---------TGTCTTTA 82 consensus_13680#2 CA-GTCTTTACATGAGGTCTGCC-----AAGATCATGGCTTAAATGCCAAAATGTCTTTA 553 consensus_13680#0 CA-GTCTTTACATGAGGTCTGCC-----AAGATCATGGCTTAAATGCCAAAATGTCTTTA 1417 consensus_13680#1 AACATCTGAACTTCAGATCTCACTCTGCAAGGAGATGGTTGAA---------TGGACCCA 612 * *** ** * ** *** * *** **** * ** ** * consensus_13680#3 CAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTT 394 consensus_13680#4 CAGTCATTTGCGTTTACTTGTTATCTCTAATTTCATCTTGCTTCAGTTACTGTTGGTCTT 142 consensus_13680#2 CAGTCATGTGC-TAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCTGTTGGTCTC 612 consensus_13680#0 CAGTCATGTGC-TAGTTATGTTGGCTATTATTTCATATTGCTTCAGTTCCCGTTGGTCTC 1476 consensus_13680#1 TGCTGAGAAGCGGACATTCCTTAGGCAGCGT---GTGGAGGCAAGGCTAGCAGCCCTTCT 669 * * ** ** * * * * * * consensus_13680#3 CATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTA 454 consensus_13680#4 CATAGACATTTAATCCTGCATATTGACATTTTTATTCTGCATGTTGATCTCTCCTAGTTA 202 consensus_13680#2 CACAGACATTTAATCCTGCATATTGACATTTT-GTTTTGCA--------------AAAAA 657 consensus_13680#0 CACAGACATTTAATCCTGCATATTGACATTTT-GTTCTGCATGTTGGTCTCTCCTAGCTA 1535 consensus_13680#1 GNTAGAGAATCAGGA--GTACACTGATGCTCTTACTCTCCTTACTGATCNTATCAAGGAA 727 *** * * * * * * *** * * * * * * * consensus_13680#3 AAGAAAAGGTACCCTCTTGAATGCGAACAAATACA-TTTGGTGTTTCTTACTTCGTATGG 513 consensus_13680#4 AAGAAAAGGTACCCTCTTGAATGCCAACAAATACAATTTGGTGTTAAAAAAAAAAAAAAA 262 consensus_13680#2 AAAAAAAA---------------------------------------------------- 665 consensus_13680#0 AAAAAGGTACCCTGTCTTGAATGCGAACAAATACAATTTGCTGTTTCTTTAAAAAAA--- 1592 consensus_13680#1 GTCAGGAGGCTTGATGACAAGTTGCTTCTTGNGGACATTGATCTTCTGGAGAGTAAACTC 787 * consensus_13680#3 TGCAACTGTGCTAGTACCATAAACATAACCTGATGCCTAGGTTATATTTGTTATGTCAAC 573 consensus_13680#4 AAA--------------------------------------------------------- 265 consensus_13680#2 ------------------------------------------------------------ consensus_13680#0 ------------------------------------------------------------ consensus_13680#1 CACTTTTCT-CTGNAAAAACTGNCAAAGGCCAAAGCTTCATTGACTGCTGCTAGAACAGC 846 consensus_13680#3 TTATTTTGTCTTTAATGTCAGGCTAGCTTATTTAAAAAA 612 consensus_13680#4 --------------------------------------- consensus_13680#2 --------------------------------------- consensus_13680#0 --------------------------------------- consensus_13680#1 AGCGAATGGCCNTTTA----------------------- 862 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||