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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13743#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2847 fasta sequence
[GCTCTCCTCGATCGACGATCCATGGATGCAGAGTAGCTAGGGGCAAAGAAAAAAGAACATTTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTTTGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCACATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATGCATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGCAATCCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATCCCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCTTCTCT-TGGGGTCATCC-CTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCACGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGCCGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAG-AAGGTCCTCATCTGCCAGA-AAAAGCTTT-GG-TCAGGAAAGAACACCCAGCA-TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA-CCCTCCCACTAGACTTCACACTCTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA-CGGC-TATATATTTATTTTAATTGAATGTTTGCAGGAGTAAGATATTAAAGTTGGTAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB630397 [GCTCTCCTCGATCGACGATCCATGGATGCAGAGTAGCTAGGGGCAAAGAAAAAAGAACATTTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTTTGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCACATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATGCATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGCAATCCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATCCCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCTTCTCT TGGGGTCATCC CTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGTGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTC ]
[+] EMBL AK065174 [ AGAGTAGCTGGGGGCAAAGAAAAAAAAACATTTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTTTGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCACATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATGCATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGTAATCCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATCCCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCTTCTCT TGGGGTCATCC CTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCACGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGCCGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCACCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGAATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA CGGC TATATATTTATTTTAATTGAATGT ]
[+] EMBL CB652272 [ aTTCTCTCCGGGGTCATCCACTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCATGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAATGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCGACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCTCCGGCAGCGGCACCATGTTTCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCACGGG ]
[+] EMBL CB630584 [ CCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGAGGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCACGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGT ]
[+] EMBL CB669641 [ GCCTGGTGCCGCCGCCGCATGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCATAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAACCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACACTGTCTCTGGCGCCCAGGGACAACCACGAGGCGCATGTGCAATTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAACGCCTGCCCTTCCCGTCCGCGGCATTCTACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGTGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGTACGGCTGG ]
[+] EMBL CF196888 [ CGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTACCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGCCGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAGCGACAAGATCANNAACGTGATGGACATGAACACCGTCTACGGAGGCNNNGCCGCCAGCCTCATn ]
[+] EMBL CA753577 [ GTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGAAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATCCTGTAGCCACCATTGCCCAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAATACAAGGCAGAACAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTTGGG TCAGGAAAG ACCCCCAGCA TGGAAAAAAAAATTC ATAACTTGATAGCCTCACCTTGATCG ACCTGGAGGCATCCCAATGT ATTCTGCTC ACGATTTCA ]
[+] EMBL CF310936 [ AGGCCCTGCTCCCGGCGCTGGGGAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCA ]
[+] EMBL CB000932 [ AGGCCTCATCGGCACCGACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGCACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGACTCTCATACGCGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCGTACTCCTCGAGAACGCCTACT ]
[-] EMBL CB630398 [ GACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAATACAAGGCAGACAAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACATTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAACCGGC TATATATTTATTTTAA ]
[+] EMBL BM419722 [ GGAGAAAGGTCCTCATCTGCCAGAGAAAAGCTTT GGTTCAGGAAAGAACACCCAGCA TTG AAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACATTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTTTTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA CGGC TATATATTTATTTTAATTGAATGTTTGCAGGAGTAAaaaaaaaa ]
[-] EMBL BU673677 [ ATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCATTTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACATTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA CGGC TATATATTTATTTTAATTGAATGTTTGCAGGAGTAAGATATTtga ]
[-] EMBL CF310935 [ AAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCCCCTTGATCGAACCTGGAGGGATCACAATGTAAATTTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCACCCCTCCCACTAGACTTCACACTTTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTTTTTGCCAGTTATCACCCAATTATTTTTTACAGTTACTAGGTGACCAATTAATTAATACCCCCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGAATGTTCATTTGTATTAGCCATAGCTTGTTTTTACGATTGTAACAATAGGAA CGGCATATATATTTATTTTAATTGAATGTTTACAGGAGTAAGATATTGTTGTTGGTAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13743#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 256 fasta sequence
[ATAAACCATTTGGCATATTACTAGTAAGCTGTGGCTGTCGCGACGGCCGTNTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCCGTCTCCTCGCCGCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTGGCCGTCGCCC]
[+] EMBL OSR17062A [ATAAACCATTTGGCATATTACTAGTAAGCTGTGGCTGTCGCGACGGCCGTNTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCCGTCTCCTCGCCGCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTGGCCGTCGCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13743#0 GCTCTCCTCGATCGACGATCCATGGATGCAGAGTAGCTAGGGGCAAAGAAAAAAGAACAT 60
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTT 120
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCAC 180
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 ATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATG 240
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGCAAT 300
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATC 360
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCT 420
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TCTCTTGGGGTCATCCCTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTG 480
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTA 540
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAG 600
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 AGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGG 660
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTC 720
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGT 780
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCG 840
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGT 900
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCC 960
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAA 1020
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCAC 1080
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCAT 1140
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGG 1200
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCA 1260
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTC 1320
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCT 1380
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCC 1440
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTG 1500
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTC 1560
consensus_13743#1 -------------------------------------------------ATAAACCATTT 11
* * *
consensus_13743#0 CATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGA 1620
consensus_13743#1 GGCATATTACTAG---TAAGCTGTGGCTGTCGCGACGGCCGTNTGGCAGAAGTCCACCGA 68
* * * ** ** * * * * ***** *****************
consensus_13743#0 CCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGT 1680
consensus_13743#1 CCCTGCCTGCTACGACAAGCTCACGCCCGTCTCCTCGCCGCCCAAGTGCGACGACAGCGT 128
*************************** ******** ** ********************
consensus_13743#0 CGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCAC 1740
consensus_13743#1 CGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCAC 188
************************************************************
consensus_13743#0 TTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGC 1800
consensus_13743#1 TTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTGGC 248
********************************************************* **
consensus_13743#0 CGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGA 1860
consensus_13743#1 CGTCGCCC---------------------------------------------------- 256
********
consensus_13743#0 CGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAG 1920
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCT 1980
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGG 2040
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTAC 2100
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 ATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAG 2160
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGC 2220
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAG 2280
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 ATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAGAAGGTCCTCATCTG 2340
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CCAGAAAAAGCTTTGGTCAGGAAAGAACACCCAGCATTGAAAAAAAAAATCAATAACTTG 2400
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 ATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAA 2460
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GACAGTGCTCAACCTAAGGCACTTCACCCTCCCACTAGACTTCACACTCTGATACAAGAA 2520
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 CGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACT 2580
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAAT 2640
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGT 2700
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 TACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATT 2760
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 GTAACAATAGGAACGGCTATATATTTATTTTAATTGAATGTTTGCAGGAGTAAGATATTA 2820
consensus_13743#1 ------------------------------------------------------------
consensus_13743#0 AAGTTGGTAAAAAAAAAAAAAAAAAAA 2847
consensus_13743#1 ---------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||