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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13750#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1766 fasta sequence
[ATTAGGACACACGAAACCATGGCGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGG-GT-CCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGA-TTGAGGCT-ATCGTGGAGTCAGAAGACAT-AAAAAAGAAGCTGTTTGTTGAGCTGGATAAGATCACT-AAACC-TTCT-GCTATTCTT-GCCTCCAATACTAGCTCAATCTCTATAACCCGATTGGCTTCAGCCACTAATCGCCCCTGTCAGGTTTCCCTGATCTCCACGCTGTCTTTTAATGCTGCTAGTTCCTTCCTAGACTCAATTGCCAATCATATGCTTACTTGTTACTTTTGTGTTGGTATAACATATTGTTTTGGGGCAACCTCCTGGATTGAAAAGGAGAATGCGCTTGTTTAGAATTTCATATCGGGTTAGTGATGCACCTGTGCGTTAACTTTTGGGTTGCATTTTTGCCAGAAGTTTGTAAGGTGGGACAGCCAGTGGTGGTGATTAGTATTGCGTTCTGAATTTAGGTACAGATCTGTTTACTTCATTTCAAGGAAGGTAGAAAAGGTTATTGTATATACTAAAGCTAACTTCAAAACATGCTCTTGAAGATAGAATGCAAATTTGGTGGATATACCTATCATGCATGCTCCGTTTGGTTGCGAAATTGTCTGAACCTCCGGTTTACATGTCTTTCATTTTGTAGTTCGATTTGTGTATCACTTAAAACTTGCCTCTGTTTGAATGCTCAGATCTTTGGGAGTAATAAATCAGAGAGTTTTTCTTGCTGCAGGTGATTGGTATGCACTTTTTTAACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTCCACTAAAGTCAAATCTTTCTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAATGATCAACGAGGCGTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGACCTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCTTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCGACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAGTGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTAATCTCCTATGCAAAAAATCTCGCACGGTTTGCATTTTCAGTCAGCACATA]
[+] EMBL AU082653 [ATTAGGACACACGAAACCATGGCGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGG GTNCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGA TTGAGGCT ATCGTGGAGTCAGAAGACAT AAAAAAGAAGCTGTTTNTTGAGCTGGATAAGATCACT NAACCTTTCT GCTATTNTTGGCCTCCAATA ]
[+] EMBL AK060287 [ CGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGGCGT CCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGA TTGAGGCT ATCGTGGAGTCAGAAGACAT AAAAAAGAAGCTGTTTGTTGAGCTGGATAAGATCACT AAACC TTCT GCTATTCTT GCCTCCAATACTAGCTCAATCTCTATAACCCGATTGGCTTCAGCCACTAATCGCCCCTGTCAGGTTTCCCTGATCTCCACGCTGTCTTTTAATGCTGCTAGTTCCTTCCTAGACTCAATTGCCAATCATATGCTTACTTGTTACTTTTGTGTTGGTATAACATATTGTTTTGGGGCAACCTCCTGGATTGAAAAGGAGAATGCGCTTGTTTAGAATTTCATATCGGGTTAGTGATGCACCTGTGCGTTAACTTTTGGGTTGCATTTTTGCCAGAAGTTTGTAAGGTGGGACAGCCAGTGGTGGTGATTAGTATTGCGTTCTGAATTTAGGTACAGATCTGTTTACTTCATTTCAAGGAAGGTAGAAAAGGTTATTGTATATACTAAAGCTAACTTCAAAACATGCTCTTGAAGATAGAATGCAAATTTGGTGGATATACCTATCATGCATGCTCCGTTTGGTTGCGAAATTGTCTGAACCTCCGGTTTACATGTCTTTCATTTTGTAGTTCGATTTGTGTATCACTTAAAACTTGCCTCTGTTTGAATGCTCAGATCTTTGGGAGTAATAAATCAGAGAGTTTTTCTTGCTGCAGGTGATTGGTATGCACTTTTTTAACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTCCACTAAAGTCAAATCTTTCTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAATGATCAACGAGGCGTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGACCTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAATGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTAATCTCCTATGCAGAACTTCTCGCACGGTTTGCATTTTCAGTCAGCACATA]
[+] EMBL C73559 [ AGAGAAATTGCGGTGGTGGGAGTNATCGGCGCGGGGCAGATGGGCTCGGGCATCG CCAGCTCGCCGCCGCCGCCGGCTGCGG GT CCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCTCAGGNCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTTTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTNATTTAAGGCTAATCGTGGAGTNAGAAGACATAAAAAAAGAAGCTGTTTGTTGAACCGGATAAGATCACTAAAACC TTCTGGCNAATCTT GCCTCNAAAATAAGCNCAATCTCTAata ]
[+] EMBL CF327311 [ AGGACATTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGACCTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCTTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCGACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAGTGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTAATCTCCTATGCAAAAAA ]
[-] EMBL CF327312 [ TCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCTTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCGACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAGTGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTAATCTCCTATGCAAAAAAa ]
consensusID : consensus_13750#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1316 fasta sequence
[AGAGTGGTACCGGTGCAGTCCCAAGTTGCCGTAGAGTAACACACCAGTACACCACGAAACGCGCAGATAAACCCAAGAACGATTAGGACACACGAAACCATGGCGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGGCGTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTGTTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCAATACTAGCTCAATCTCTATAACCCGATTGGCTTCAGCCACTAATCGCCCCTGTCAGGTGATTGGTATGCACTTTTTTAACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAAT-GATCAACGAGGCGTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACA-TTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGAC-CTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAATGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTAATCTCCTATGCAGAACTTCTCGCACGGTTTGCATTTTCAGTCAGCACATA]
[+] EMBL AK103329 [AGAGTGGTACCGGTGCAGTCCCAAGTTGCCGTAGAGTAACACACCAGTACACCACGAAACGCGCAGATAAACCCAAGAACGATTAGGACACACGAAACCATGGCGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGGCGTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTGTTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCAATACTAGCTCAATCTCTATAACCCGATTGGCTTCAGCCACTAATCGCCCCTGTCAGGTGATTGGTATGCACTTTTTTAACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAAT GATCAACGAGGCGTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACA TTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGAC CTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAATGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTAATCTCCTATGCAGAACTTCTCGCACGGTTTGCATTTTCAGTCAGCACATA]
[+] EMBL CF303569 [ CTATTCTTGCCTCCAATACTAGCTCAATCTCTATAACCCGATTGGCTTCAGCCACTAATCGCCCCTGTCAGGTGATTGGTATGCACTTTTTTAACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATTCATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAAT GATCAACGAGGCGTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACA TTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGAC CTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGAT ]
[-] EMBL CB659448 [ ACTTTTTTAACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAAT GATCAACGAGGCGTTTTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACA TTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGAC CTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTTTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAATGTATAGATACTGAGCAGATCATGCCTTAGGGGTTCTGTAATCT ]
[-] EMBL BI306592 [ CATCCTCATGCCAAT GATCAACGAGGCGTTCTGGGCACTTTACACTGGAG AGCGACTAAAGAGGACA TTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGAC CTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTTTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAACAACAGGATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAATGTATAGATACTGAGCAGA ]
[+] EMBL BI800513 [ CAATGGATCAACGAGGCTTTCTGGCCACTTTACACTGGAGTAGCGACTAAAGAGGACACTTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGACACTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGC AATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAAC ACAGGATACTGCAGGCCATGTTTGGGCTATGTAAAC AAGTACTCGGGAAAAATGGCGGCCGTGTGATGTAAGCTAATATGAAATGTATAGATATTTAGCAGATCAaaa ]
[+] EMBL BQ908238 [ AACGAGGCGTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACA TTGATACGGGGATGAAGCTAGGCACGAATCATCCCATGGGAC CTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAACATAAACACCTAAAAaaaa ]
consensusID : consensus_13750#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1026 fasta sequence
[ATGGCGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGGCGTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCNAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTGTTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCNATACTAGCTCAAT-CTCTATAA-CCCGATTGGCTTTCAGCCACTAATCGCCCCTGT-CAGGTGATTGGTATGCACTTTTTTA-ACCCTCCTCCGATNATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGG-AAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTG-AACCGCATCCTCATGCCAAT-GATCAACGAGGCG-TTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCNCGAATCATCCCCATGGGACCTCTNCAGCTTGCTGATTNCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGA-CAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA754182 [ATGGCGACGCAAGCGACGGCGAGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAGCTCGCCGCCGCCGCCGGCTGCGGCGTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCCCGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCNAGGGCCAGCTTTCTCAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTTAGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTGTTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCNATACTAGCTCAAT CTCTATAA CCCGATTGGC TTCAGCCACTAATCGCCCCTGT CAGGTGATTGGTATGCACTTTTTTA ACCCTCCTCCGATNATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGG AAGACGGTNATATGCTCACAAGACTACCCTGGGTTCATCGTG AACCGCATCCTCATGCCAATGGATC ACGAGGCG TTC ]
[+] EMBL AU082652 [ CCAATACTAGNTCAATCCTCTA AN CCCGATTGGCTTTCAGCCACTAATCGCCCCTGTCCAGGTGATTGGTATGCACTTTTTTA ACCCTCCTCCGATNATGAAATTGATTGAAATCNTACGTGGGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTGCAACCGCATCCTCATGCCAAT GATCAACGAGGCGTTTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCNCGAATCATCCCCATGGGACCTCTNCAGCTTGCTGATTNCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGA CAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BQ907192 [ CTCAAT CTCTATAACCCCGATTGGCTTTNACCCATTATTCCCCCCTGT CAAGTAATTGGTATCCACTTTTTTANACCCTCCTCCGATAATGAAATTGATTGAAATCATACGT GGGCTGATACATCAGAAGAGGTTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGG AAGACGGTAATATGCTCACAAGACTACCCTGGTTTCATCGTG AACCGCATCCTCATGCCAAT GATCAACGAGGCG TTCTGGGCACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCACGAATCAT CCCATGGGACCTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCAGTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTNTCGTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTATAGGACCAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTGAGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGTGCAGTTTACAGGTCCCAAAAAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13750#1 AGAGTGGTACCGGTGCAGTCCCAAGTTGCCGTAGAGTAACACACCAGTACACCACGAAAC 60
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 ------------------------------------------------------------
consensus_13750#1 GCGCAGATAAACCCAAGAACGATTAGGACACACGAAACCATGGCGACGCAAGCGACGGCG 120
consensus_13750#2 ---------------------------------------ATGGCGACGCAAGCGACGGCG 21
consensus_13750#0 ---------------------ATTAGGACACACGAAACCATGGCGACGCAAGCGACGGCG 39
*********************
consensus_13750#1 AGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAG 180
consensus_13750#2 AGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAG 81
consensus_13750#0 AGAGAAATTGCGGTGGTGGGAGTGATCGGCGCGGGGCAGATGGGCTCGGGCATCGCCCAG 99
************************************************************
consensus_13750#1 CTCGCCGCCGCCGCCGGCTGCGGCGTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCC 240
consensus_13750#2 CTCGCCGCCGCCGCCGGCTGCGGCGTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCC 141
consensus_13750#0 CTCGCCGCCGCCGCCGGCTGCGG-GTCCTCCTCCTCGACTCCGACACCGCCGCCCTCTCC 158
*********************** ************************************
consensus_13750#1 CGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCT 300
consensus_13750#2 CGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCNAGGGCCAGCTTTCT 201
consensus_13750#0 CGCGCCGTCGACTCCATCTCCTCCTCCCTCCGCCGCCTCGTCGCCAAGGGCCAGCTTTCT 218
********************************************* **************
consensus_13750#1 CAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTT 360
consensus_13750#2 CAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTT 261
consensus_13750#0 CAGGCCTCCTGTGAGCATTCCATCGAGCAGATTAAGTGCGTCTCCAGTGTGCAAGAGCTT 278
************************************************************
consensus_13750#1 AGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTG 420
consensus_13750#2 AGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTG 321
consensus_13750#0 AGGGATGCGGATCTTGTGATTGAGGCTATCGTGGAGTCAGAAGACATAAAAAAGAAGCTG 338
************************************************************
consensus_13750#1 TTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCAATACTAGCTCA 480
consensus_13750#2 TTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCNATACTAGCTCA 381
consensus_13750#0 TTTGTTGAGCTGGATAAGATCACTAAACCTTCTGCTATTCTTGCCTCCAATACTAGCTCA 398
************************************************ ***********
consensus_13750#1 ATCTCTATAACCCGATTGGCTT-CAGCCACTAATCGCCCCTGTCAGGT------------ 527
consensus_13750#2 ATCTCTATAACCCGATTGGCTTTCAGCCACTAATCGCCCCTGTCAGGT------------ 429
consensus_13750#0 ATCTCTATAACCCGATTGGCTT-CAGCCACTAATCGCCCCTGTCAGGTTTCCCTGATCTC 457
********************** *************************
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 CACGCTGTCTTTTAATGCTGCTAGTTCCTTCCTAGACTCAATTGCCAATCATATGCTTAC 517
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 TTGTTACTTTTGTGTTGGTATAACATATTGTTTTGGGGCAACCTCCTGGATTGAAAAGGA 577
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 GAATGCGCTTGTTTAGAATTTCATATCGGGTTAGTGATGCACCTGTGCGTTAACTTTTGG 637
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 GTTGCATTTTTGCCAGAAGTTTGTAAGGTGGGACAGCCAGTGGTGGTGATTAGTATTGCG 697
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 TTCTGAATTTAGGTACAGATCTGTTTACTTCATTTCAAGGAAGGTAGAAAAGGTTATTGT 757
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 ATATACTAAAGCTAACTTCAAAACATGCTCTTGAAGATAGAATGCAAATTTGGTGGATAT 817
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 ACCTATCATGCATGCTCCGTTTGGTTGCGAAATTGTCTGAACCTCCGGTTTACATGTCTT 877
consensus_13750#1 ------------------------------------------------------------
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 TCATTTTGTAGTTCGATTTGTGTATCACTTAAAACTTGCCTCTGTTTGAATGCTCAGATC 937
consensus_13750#1 ----------------------------------------GATTGGTATGCACTTTTTTA 547
consensus_13750#2 ----------------------------------------GATTGGTATGCACTTTTTTA 449
consensus_13750#0 TTTGGGAGTAATAAATCAGAGAGTTTTTCTTGCTGCAGGTGATTGGTATGCACTTTTTTA 997
********************
consensus_13750#1 ACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGG 607
consensus_13750#2 ACCCTCCTCCGATNATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGG 509
consensus_13750#0 ACCCTCCTCCGATAATGAAATTGATTGAAATCATACGTGGGGCTGATACATCAGAAGAGG 1057
************* **********************************************
consensus_13750#1 TTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAG 667
consensus_13750#2 TTTTCACTAAAGTCAAATCTTTTTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAG 569
consensus_13750#0 TTTCCACTAAAGTCAAATCTTTCTCTGAAAGGCTTGGGAAGACGGTAATATGCTCACAAG 1117
*** ****************** *************************************
consensus_13750#1 ACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAATGATCAACGAGGCGTTCTGGG 727
consensus_13750#2 ACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAATGATCAACGAGGCGTTCTGGG 629
consensus_13750#0 ACTACCCTGGTTTCATCGTGAACCGCATCCTCATGCCAATGATCAACGAGGCGTTCTGGG 1177
************************************************************
consensus_13750#1 CACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCACGA 787
consensus_13750#2 CACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCNCGA 689
consensus_13750#0 CACTTTACACTGGAGTAGCGACTAAAGAGGACATTGATACGGGGATGAAGCTAGGCACGA 1237
******************************************************** ***
consensus_13750#1 ATCATCCC-ATGGGACCTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCA 846
consensus_13750#2 ATCATCCCCATGGGACCTCTNCAGCTTGCTGATTNCATTGGTTTAGATGTCTGCCTTTCA 749
consensus_13750#0 ATCATCCC-ATGGGACCTCTGCAGCTTGCTGATTTCATTGGTTTAGATGTCTGCCTTTCA 1296
******** *********** ************* *************************
consensus_13750#1 GTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTC 906
consensus_13750#2 GTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTC 809
consensus_13750#0 GTGCTTCGGGTACTTCATAATGGCCTAGGAGATAGCAAATACAGCCCTTGCCCTCTTCTC 1356
************************************************************
consensus_13750#1 GTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTAT 966
consensus_13750#2 GTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTAT 869
consensus_13750#0 GTTCAATATGTTGATGCTGGCCGACTTGGGAAGAAGCGTGGACAAGGCGTATACTCGTAT 1416
************************************************************
consensus_13750#1 AGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTG 1026
consensus_13750#2 AGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCCTGCTG 929
consensus_13750#0 AGGACAAGGTCTTCATCCATTAAACCGAGGTCATCTCTGTGAAAATCGATGTGCTTGCTG 1476
****************************************************** *****
consensus_13750#1 AGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGT 1086
consensus_13750#2 AGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGT 989
consensus_13750#0 AGCAGAGAAAAGAATGCTCTTTATGGACTTTGTGTATCAATGTGAAAAAATAAGAAATGT 1536
************************************************************
consensus_13750#1 GCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCAACAACAG 1146
consensus_13750#2 GCAGTTTACAGGTCCAAAAAAAAAAAAAAAAAAAAAA----------------------- 1026
consensus_13750#0 GCAGTTTACAGGTCCAACATAAACACCTACAAGTTACGCCTTTGCAAGTTGCGACAACAG 1596
***************** * *** * * ** *
consensus_13750#1 GATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTG 1206
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 GATACTGCAGGCCATGTTTGGGCTATGTAAACAAAGTACTCGGGAAAAATGGCGGCCGTG 1656
consensus_13750#1 TGATGTAAGCTAATATGAAATGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTA 1266
consensus_13750#2 ------------------------------------------------------------
consensus_13750#0 TGATGTAAGCTAATATGAAGTGTATAGATACTGAGCAGATCATGCCTTAGGACTTCTGTA 1716
consensus_13750#1 ATCTCCTATGCAGAACTTCTCGCACGGTTTGCATTTTCAGTCAGCACATA 1316
consensus_13750#2 --------------------------------------------------
consensus_13750#0 ATCTCCTATGCAAAAAATCTCGCACGGTTTGCATTTTCAGTCAGCACATA 1766
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||