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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13761#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1535 fasta sequence
[GGAATAGATCGATATCATCTCCTCTCATCTCATCTTAATTATCTCTCCCATGTGTCCCTAGACATATAGTCCATGCACTAATCGATCGATATATCTATATAGTTTTCGAGAGATATTTTGCTGGTTGCAATTAGTCTCGAGCTTACAGCGACCTTCCAGGTCAGAGGTAGCCGGATTAAATCCTTGGTTTATTTATAGTGCTTGATCGATCATGTCGTCTTCCTCCAATAGCGACTCCGGCAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC-GACGCCTGCGCCGGCGTCA-CCAAGGCCCGCGTCG--ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA---GG-------GGTCGCC-GCGTTTAGAGGATTTG-CTTC-GTTTCG--CCGGTG-TCG-CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA-CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCAAATTGGTAAAAAAAAAAAAAAAACAAAAAAGGA]
[+] EMBL AK061726 [GGAATAGATCGATATCATCTCCTCTCATCTCATCTTAATTATCTCTCCCATGTGTCCCTAGACATATAGTCCATGCACTAATCGATCGATATATCTATATAGTTTTCGAGAGATATTTTGCTGGTTGCAATTAGTCTCGAGCTTACAGCGACCTTCCAGGTCAGAGGTAGCCGGATTAAATCCTTGGTTTATTTATAGTGCTTGATCGATCATGTCGTCTTCCTCCAATAGCGACTCCGGCAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCT ]
[+] EMBL AK065856 [ GCGACTCCGGCAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAA ]
[+] EMBL C93621 [ CGGCAACCCTCTGGAAGCCATGGNCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCNAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGG NAGGCGTTCCCCGGCAGCAAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGA NTCGGGCCGGAGCGGCTGCGCGTNCACCAGCTGGTGTGGCCGGGGACGCACGATTCGGCGACGAACAAGATCGGCATCCCGTTCGTAACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCTGCGGGCGCCCGTTTNATCGACGTGCGCTTC ]
[+] EMBL CB654476 [ AACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGT ]
[+] EMBL CB654860 [ CCCTCTCGTAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAG ]
[+] EMBL AU174534 [ TCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCTCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACG ]
[+] EMBL CB684595 [ ATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTG ]
[-] EMBL CB654477 [ GGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATGGTTGAAATGTATATAGTGGTGAAATTGCTCGT ]
[-] EMBL CB684596 [ CCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGAT ]
[+] EMBL BI812265 [ CGT TTGAA CCGCGCAATTCGCCGGC TCCAA CCCGCCGA CC CTGT GAGC CC GCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGA CAAC TCAAGTTCCTCGGCGA CA CC CCGGT GCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCA GCCGACAACCCGGTGCTCTGCGTCC GCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAA GCCCGCGTCG ACGGC CCGCGTGAGATTGCATGGTCGGGCCCTGTAGTAATTAGA G GGTC CC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTAC AAGGAATAATCGC AAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCAATTTGGTAAAAAAA ]
[-] EMBL CB654861 [ CCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGCCCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTTTGCGTCCGGCCGGTCACGCGGCGGATCCACGGTTACGCCCGCCTCTTCATCGCCGAGGTTTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTTTCCCCCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACC CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTCCAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTACCGAGGGTAAGGGGGAGGATCAAATTGGTAAAAAAAAAAAAAAAACAAAAAAGGA]
[+] EMBL BQ906064 [ GATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTCAGACGCCTGCGCCGGCGTCACCCAAGGCCCGCGTCGTAACGGCGCCGCGTGAGATTGCATGGTCGGGCCCTGTAGTAATTAGATGTGGNGTGTTCGGTCCCCGGCGTTTAGAGGATTTGCCTTCTGTTTCGGCCCGGTGTTCGCCAGCGTACGTACAGATTAGTTTGTTTTGTTCGTGTTAGACACCNTGATTTATGAATGATTTATTATCATGCAaaaa ]
[+] EMBL AU174535 [ CGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCAAATTGGTAAAAAAAAAAAA ]
consensusID : consensus_13761#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence
[CTCGGCGACAGCCGCCCGGTGCCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTNNTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCCCCCCCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCCCGGCGTCANCCAAGGCCCGCGTCGACGGCNCCCGCGTGAGATTGCATGGTCGGGCCCCTGTAGTAATTAGAGGGGTCGCCCGCGTTTAGAGGATTTGCTTCGTTTCGCCCGGTGTCGCCAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACACCGTGATTTATGAATGATTTATTATCACTGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAGGAATAATCGCAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCNAATTGGTATTTGATTGTGTTCCCTCCAAAAAAAAAA]
[+] EMBL BQ906897 [CTCGGCGACAGCCGCCCGGTGCCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTNNTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCCCCCCCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCCCGGCGTCANCCAAGGCCCGCGTCGACGGCNCCCGCGTGAGATTGCATGGTCGGGCCCCTGTAGTAATTAGAGGGGTCGCCCGCGTTTAGAGGATTTGCTTCGTTTCGCCCGGTGTCGCCAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACACCGTGATTTATGAATGATTTATTATCACTGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAGGAATAATCGCAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCNAATTGGTATTTGATTGTGTTCCCTCCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13761#0 GGAATAGATCGATATCATCTCCTCTCATCTCATCTTAATTATCTCTCCCATGTGTCCCTA 60
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 GACATATAGTCCATGCACTAATCGATCGATATATCTATATAGTTTTCGAGAGATATTTTG 120
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CTGGTTGCAATTAGTCTCGAGCTTACAGCGACCTTCCAGGTCAGAGGTAGCCGGATTAAA 180
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 TCCTTGGTTTATTTATAGTGCTTGATCGATCATGTCGTCTTCCTCCAATAGCGACTCCGG 240
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCG 300
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGA 360
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 GGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGG 420
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 GCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAA 480
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTA 540
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGT 600
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTT 660
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGA 720
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCA 780
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 GGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGT 840
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 GTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTA 900
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 CCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAA 960
consensus_13761#1 ------------------------------------------------------------
consensus_13761#0 GTTCCTCGGCGAGCAGCCGCC-GGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACA 1019
consensus_13761#1 ----CTCGGCGA-CAGCCGCCCGGTGCCCGACCGGAGGTTCTTCTACCGGGTGGAGAACA 55
******** ******** **** *********************************
consensus_13761#0 CGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCC 1079
consensus_13761#1 CGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCC 115
************************************************************
consensus_13761#0 ACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTT-CGCCAAGGGCCTCGGCGACAAGCTG 1138
consensus_13761#1 ACGGCTACGCCCGCCTCTTCATCGCCGAGGTNNTTCGCCAAGGGCCTCGGCGACAAGCTG 175
******************************* * *************************
consensus_13761#0 CAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCC-GGCGTCAC 1197
consensus_13761#1 CAGGTGTTCCCCCCCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCCCGGCGTCAN 235
********* ** ************************************** *******
consensus_13761#0 C-AAGGCCCGCGTCGACGGCGCC-GCGTGAGATTGCATGGCCGGGCCC-TGTAGTAATTA 1254
consensus_13761#1 CCAAGGCCCGCGTCGACGGCNCCCGCGTGAGATTGCATGGTCGGGCCCCTGTAGTAATTA 295
* ****************** ** **************** ******* ***********
consensus_13761#0 GAGGGGTCGCC-GCGTTTAGAGGATTTGCTTCGTTTCGCC-GGTGTCGC-AGCGTACGTA 1311
consensus_13761#1 GAGGGGTCGCCCGCGTTTAGAGGATTTGCTTCGTTTCGCCCGGTGTCGCCAGCGTACGTA 355
*********** **************************** ******** **********
consensus_13761#0 CAGATTAGTTTGTGTTGTTCGTGTTAGACAC-GTGATTTATGAATGATTTATTATCA-TG 1369
consensus_13761#1 CAGATTAGTTTGTGTTGTTCGTGTTAGACACCGTGATTTATGAATGATTTATTATCACTG 415
******************************* ************************* **
consensus_13761#0 CATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCT 1429
consensus_13761#1 CATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCT 475
************************************************************
consensus_13761#0 CGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTA 1489
consensus_13761#1 CGTGTACAA-GGAATAATCGCAA-GTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTA 533
********* ************* ************************************
consensus_13761#0 ATGGAGAGGATCAAATTGGTAAAAAAAAAAAAAAAA--CAAAAAAGGA- 1535
consensus_13761#1 ATGGAGAGGATCNAATTGGTATTTGATTGTGTTCCCTCCAAAAAAAAAA 582
************ ******** * ******* *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||