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Oryza sativa
cluster # 13781 cluster # 13781       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13781#0 length = 1027 sequences # 10  
consensus_13781#1 length = 692 sequences # 3  
consensus_13781#2 length = 222 sequences # 1  

consensusID : consensus_13781#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1027
fasta sequence
                              [CCACACCCAATTCCCTTCTCACCTTTCCTCCTCCAAATCCGACCTCCTCTTGTTCTTCCTCCTCCACCCCCATCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGA-TTCGTCGTTCTCTTGGTTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAAGACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCC-GCACCCACCATCGGCAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGA-TTT-AGGAGGACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAACTACAAGTTGCTCCATTTTTTTTCTCATATTCTCTGATGATATACACACATCATTTTCCTGTGCGCAATTCTTGAAATTCAGAGTTTTG]

[+] EMBL AK058229             [ CACACCCAATTCCCTTCTCACCTTTCCTCCTCCAAATCCGACCTCCTCTTGTTCTTCCTCCTCCACCCCCATCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGA TTCGTCGTTCTCTTGGTTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAAGACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCC GCACCCACCATCGGCAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGA TTT AGGAGGACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAA                                                                                                         ]
[+] EMBL CF297302             [cgACACCCAATTCCCTTCTCACCTTTCCTCCTCCAAATCCGACCTCCTCTTGTTCTTCCTCCTCCACCCCCATCGCCTATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGATTTGGTC TTTTCTTGGTTGGTTGACGAGGAGGAGG    GGG  AAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTGGTGGGGCTCGACAACGCCGGCAAGACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCC GCACCCACCATCGGCAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGA TTT AGGAGGACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATAATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTTGTCCTCGTGTTCGCGAACAAGCAGGATCTCAAGGACGCCATGTCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS13708A            [                            TCCTCCAAATCCGACCTCCTCTTGTTCTTCCTCCTCCACCCCCATCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGA TTCGTCGTTCTCTTGGTTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU070578             [                             CCTCCAAATCCGACCTCCTCTTGTTCTTCCTCCTCCACCCCCATCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGA TTCGTCGTTCTCTTGGTTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAAGACCACCACGCTCTACAAGCTCCAACTCGGGGANGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BQ060182             [                                                              caacaaaCCTTCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGA TTCGTCGTTCTCTTGGTTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAAGACCACCGCGCTCTACAAACTCCACCTCGGGGAGGCCGTCACCGCC GCACCCACCATCGGCAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGCGAGGGAGTGT TGGAag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK071632             [                                                                                        CCAAACTCGCAGTCCACTTCCTCCCGCGGAGATCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGA TTCGTCGTTCTCTTGGTTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTTCTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAAGACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCC GCACCCACCATCGGCAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGA TTT AGGAGGACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAATCAACTACAAGTTGCTCCATTTTTTTTCTCATATTCTCTGATGATATACACACATCATTTTCCTGTGCGCAATTCTTGAAATTCAGAGTTTTG]
[+] EMBL AU096443             [                                                                                                                                                                                                                                                  TTGATGTTCCCGGCGAAGGNGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAAGACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCC GCACCCACCATCGGCAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGA TTT AGGAGGACAAGAGAGTCTACGGA TTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCNCAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCNACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAA                                                                                         ]
[+] EMBL AU161567             [                                                                                                                                                                                                                                                                                                                                     CCTCGGGAAGCCCGTCACCGCCGGCACCCACCATNGGCAGCAACGTCNAGAAGGTCGTCTTCAAGAACATCCGATTCAAGGTGTGGGA TTT AGGAGGNCAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAA                                                                                          ]
[+] EMBL BI805772             [                                                                                                                                                                                                                                                                                                                                                                                              TCTTCAAGAACATCCGATTCGAGGT TGGGA TTTGAGGAGGACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACCGACCGTGCTCGGATCAACNTTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCNTGGATTTGTTGGAGCTGNCCGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACC ATCTGAAATAT AAAGATC AATTTGTGC CAAAAA                                                                                          ]
[+] EMBL BI799666             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCTACGGACTTCGT GGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGC CAGTAGTCCTCGTGTTC CAAACAA CAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGGCTGGATAGCTCAGAAAGTC CCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGCCA GTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACC ATCTGAAATATAAAAGATCAAATTTGTGC CAAAA                                                                                           ]


>consensus_13781#0 CCACACCCAATTCCCTTCTCACCTTTCCTCCTCCAAATCCGACCTCCTCTTGTTCTTCCT CCTCCACCCCCATCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGA TCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGATTCGTCGTTCTCTTGG TTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTT CTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAA GACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCCGCACCCACCATCGG CAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGATTTAGGAGG ACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGT TGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCT GCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCT CAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAA CCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCT CGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGT ATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTAC CACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACC AATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAACTACAAGTTGCTCCATTTTTTT TCTCATATTCTCTGATGATATACACACATCATTTTCCTGTGCGCAATTCTTGAAATTCAG AGTTTTG



consensusID : consensus_13781#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 692
fasta sequence
                              [AACATCCGATTCGAGGTGTGGGATTTAGGAGGACAAGAGAGTCTACGGATTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGNCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTCATTTGTGTCTCACATGTCTGCAAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAAA]

[+] EMBL AU097417             [AACATCCGATTCGAGGTGTGGGATTTAGGAGGACAAGAGAGTCTACGGATTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGACCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCTCGNCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGTCTG  AAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAAA]
[+] EMBL CF316338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGTTCATTTGTGTCTCACATGTCTGCAAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAA ]
[-] EMBL CF316339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTTCATTTGTGTCTCACATGTCTGCAAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAAA]


>consensus_13781#1 AACATCCGATTCGAGGTGTGGGATTTAGGAGGACAAGAGAGTCTACGGATTCGTGGGCAA CATACTACAGAGGAACCCATGCTGTCATCGTTGTAATTGACAGCACAGACCGTGCTCGGA TCAACATTATCAAGGATGAGCTCTTCCGGCTGCTTCAGCATGGGGACCTCGAGGGCGCAG TAGTCCTCGTGTTCGCAAACAAGCAGGATCTCAAGGACGCCATGTCGCCAGCTGAGATCA CCGACGCTCTCTCCCTCCACAGCATAAAGACCACGATTGGCACATACAGGCCTCATGCGC GATCACCGGTGAGGGCCTCTACGACGGGCTCGNCTGGATAGCTCAGAAAGTCGCCGGCAA GGCCACAACAAGCTGACCCATAGCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGT TGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTTATTTATGTCTCACATGT CTGAAAAAAACCATGTCTGTATTCCCTACCAATCTGACCCATAGCGCCTGTATTTCCATG GATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGT GTTCATTTGTGTCTCACATGTCTGCAAAAAAAACCATGTCTGTATTCCCTACCAATCTGA AATATAAAAGATCAAATTTGTGCGCAAAAAAA



consensusID : consensus_13781#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 222
fasta sequence
                              [AGTCGCCGGCAAGGCCACAACAAGTTGACCCATATCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTTGCTGCTGCTGCTGCTACCACTTCAGTGTTCATTTGTGTTTCACATGTCTGCAAAAAAACCCATGTTTGTATTCCCTCCCAATTTGAAATATAAAAGATCAAATTTGTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF297303             [AGTCGCCGGCAAGGCCACAACAAGTTGACCCATATCGCCTGTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTTGCTGCTGCTGCTGCTACCACTTCAGTGTTCATTTGTGTTTCACATGTCTGCAAAAAAACCCATGTTTGTATTCCCTCCCAATTTGAAATATAAAAGATCAAATTTGTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13781#2 AGTCGCCGGCAAGGCCACAACAAGTTGACCCATATCGCCTGTATTTCCATGGATTTGTTG GAGCTGGCAGGTTGTGTTTGTTTGCTGCTGCTGCTGCTACCACTTCAGTGTTCATTTGTG TTTCACATGTCTGCAAAAAAACCCATGTTTGTATTCCCTCCCAATTTGAAATATAAAAGA TCAAATTTGTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13781#0      CCACACCCAATTCCCTTCTCACCTTTCCTCCTCCAAATCCGACCTCCTCTTGTTCTTCCT 60
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ------------------------------------------------------------
                                                                                   

consensus_13781#0      CCTCCACCCCCATCGCCGATCCGATCCCCCAAACTCGCAGTCCACTTCCTCCCGCGGAGA 120
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ------------------------------------------------------------
                                                                                   

consensus_13781#0      TCCATCCACCACCAGCCGCCAGCCGCCGCGGCGCGAGATTCAGATTCGTCGTTCTCTTGG 180
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ------------------------------------------------------------
                                                                                   

consensus_13781#0      TTGTTTGAGGAGGAGGAGGAGGAGGGACAAGATGGGGGCGTGGATGTCGCGGGTGTGGTT 240
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ------------------------------------------------------------
                                                                                   

consensus_13781#0      CTTGATGTTCCCGGCGAAGGAGTACAAGATCGTCGTCGTGGGGCTCGACAACGCCGGCAA 300
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ------------------------------------------------------------
                                                                                   

consensus_13781#0      GACCACCACGCTCTACAAGCTCCACCTCGGGGAGGCCGTCACCGCCGCACCCACCATCGG 360
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ------------------------------------------------------------
                                                                                   

consensus_13781#0      CAGCAACGTCGAGGAGGTCGTCTTCAAGAACATCCGATTCGAGGTGTGGGATTTAGGAGG 420
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ----------------------------AACATCCGATTCGAGGTGTGGGATTTAGGAGG 32
                                                                                   

consensus_13781#0      ACAAGAGAGTCTACGGACTTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGT 480
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      ACAAGAGAGTCTACGGA-TTCGTGGGCAACATACTACAGAGGAACCCATGCTGTCATCGT 91
                                                                                   

consensus_13781#0      TGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCT 540
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      TGTAATTGACAGCACAGACCGTGCTCGGATCAACATTATCAAGGATGAGCTCTTCCGGCT 151
                                                                                   

consensus_13781#0      GCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCT 600
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      GCTTCAGCATGGGGACCTCGAGGGCGCAGTAGTCCTCGTGTTCGCAAACAAGCAGGATCT 211
                                                                                   

consensus_13781#0      CAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGAA 660
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      CAAGGACGCCATGTCGCCAGCTGAGATCACCGACGCTCTCTCCCTCCACAGCATAAAGA- 270
                                                                                   

consensus_13781#0      CCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCT 720
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      CCACGATTGGCACATACAGGCCTCATGCGCGATCACCGGTGAGGGCCTCTACGACGGGCT 330
                                                                                   

consensus_13781#0      CGGCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGT 780
consensus_13781#2      ------------------AGTCGCCGGCAAGGCCACAACAAGTTGACCCATATCGCCTGT 42
consensus_13781#1      CGNCTGGATAGCTCAGAAAGTCGCCGGCAAGGCCACAACAAGCTGACCCATAGCGCCTGT 390
                                         ************************ ********* *******

consensus_13781#0      ATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTAC 840
consensus_13781#2      ATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTT--TGCTGCTGCTGCTGCTAC 100
consensus_13781#1      ATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTGTTTGTTATTGCTGCTGCTGCTGCTAC 450
                       ****************************************  ******************

consensus_13781#0      CACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAA--CCATGTCTGTATTCCCTA 898
consensus_13781#2      CACTTCAGTGTTCATTTGTGTTTCACATGTCTGCAAAAAAACCCATGTTTGTATTCCCTC 160
consensus_13781#1      CACTTCAGTGTTTATTTATGTCTCACATGTCTGAAAAAAA--CCATGTCTGTATTCCCTA 508
                       ************ **** *** *********** ******  ****** ********** 

consensus_13781#0      CCAATCTGAAATATAAAAGATCAAATTTGTGCGCAAAAAACTACAAGTTGCTCCATTTTT 958
consensus_13781#2      CCAATTTGAAATATAAAAGATCAAATTTGTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAA 220
consensus_13781#1      CCAATCTGACCCATAGCGCCT---GTATTTCCATGGATTTGTTGGAGCTGGCAGGTTGTG 565
                       ***** ***   ***     *    * * * *    *        *              

consensus_13781#0      TTTCTCATATTCTCTGATGATATACACACATCATT-TTCCTGTGCGCAATTCTTGAAATT 1017
consensus_13781#2      AA---------------------------------------------------------- 222
consensus_13781#1      TTTGTTATTGCTGCTGCTGCTGCTACCACTTCAGTGTTCATTTGTGTCTCACATGTCTGC 625
                                                                                   

consensus_13781#0      CAGAGTTTTG-------------------------------------------------- 1027
consensus_13781#2      ------------------------------------------------------------
consensus_13781#1      AAAAAAAACCATGTCTGTATTCCCTACCAATCTGAAATATAAAAGATCAAATTTGTGCGC 685
                                                                                   

consensus_13781#0      -------
consensus_13781#2      -------
consensus_13781#1      AAAAAAA 692
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)