These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1818 fasta sequence [CCCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG-TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCATGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAATGTACACAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT-GACCATTCAGATTGAGCGCGAGTAGG-CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA-TCA-GATCAGCAGAGTCCAACAATTCCTGCA-GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC-TTAGTCA-ATTAGGTGAGTTGATGTTAA-T-CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG-TACTAGTTT-TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAAAAAAAAA] [+] EMBL AK100735 [CCCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCATGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAATGTACACAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTTTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTC ] [+] EMBL CF297375 [ CCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTC ] [+] EMBL CB643998 [ ATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATNCAGAGCATGGCCATGTACATC ] [+] EMBL AU070577 [ TCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGG GACGACCACNGCGACGGCAACGGCGGCGGCGGCAGAGAANCCCTCNTCATCCCCAAGATGGACAGCCATAACTCAGCACNTCCCCAGATTGCTGAAGTNAGAATNGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATNCTTTGCATCATATTCATGGCGGTCGAANTGGTTt ] [+] EMBL AY266290 [ GCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCACTGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTCGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCCGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCATGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAGTATACACAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGACAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTT ] [+] EMBL CB658660 [ GGAACCTCATTATTGCTGAGATCCTTTGCATCATATTCATGGCGGTCCAAGTGGTTGGAGGTATCAAAGCAAACAGATTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAACTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAAGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGATAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACAGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAATATCAACAGCATGGCCATGTACATCACCACGAACATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAAGAACCATTGCTCAATACTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAATGATGCCAAGAATGCTCGACGTAATATCAATGTACACAGTGCTTATCTACATGTGCTTGGGGATTCAATCCGGAGCATCTGAGAGATGATTGCATGGGCTATCA ] [-] EMBL CB658661 [ GAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGGTGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCAGGGGAAATAATAACCAAGTTTCGTTTGGCCTTA ] [-] EMBL CB643999 [ TTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAAAAAAAAA] [+] EMBL AU097415 [ GAGACCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTATAAAAAAA ] [-] EMBL CF297376 [ GACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT ACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACGTGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAA ] [+] EMBL AU030725 [ cGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAAA ] [+] EMBL BI809084 [ GTACATCAAGTCTGAGGACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTA CCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAACT CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTTTGGCCTTTATAAAAAAAA ] [-] EMBL BU672916 [ GTACATCAAGTCTGAGTACAACATCAGCCATGTCGACCATTCAGATTGAGCGCGAGTAGGTCTTGCCCGCTTGAGACAGGTAGGTACTGTTGATGATAGAACGGATCATCGTCATCTCATCTCATGGGACCAACTTATCAGGTACCTGTTTCACGGGTTTTAAGCCGTTCCTGTTAGCTCTGCAGTGCAAACTCACGATCAGCAGAGTCCAACAATTCCTGCACGGTTCATCTGAATGTTAGCTTCTGATGCTGTTTCTTACTATAAGTACGTGTTACTAGTACGATCGTTAGTCATATTAGGTGAGTTGATGTTAA TACACTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTGTGCGTCTGTAGTCTAGCGCCCAGCCGCTAGTAGTTTATTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTTTGCCATTATAAA ] consensusID : consensus_13796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence [GTGCATCAGAAGAATAGCAGCTGATGACTGCTGATTATCAACTATAAGTACGTGATTAATAGTACTATCATACTCAATTAGGTGAGTAGATGTTAACCAGTTTCGATAGTCGGTGGAATTAACCATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTT] [-] EMBL BU672995 [GTGCATCAGAAGAATAGCAGCTGATGACTGCTGATTATCAACTATAAGTACGTGATTAATAGTACTATCATACTCAATTAGGTGAGTAGATGTTAACCAGTTTCGATAGTCGGTGGAATTAACCATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13796#0 CCCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGC 60 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCC 120 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTC 180 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 ATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTC 240 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCAT 300 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGC 360 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 AAACAGTTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGC 420 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGG 480 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 GTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGC 540 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGG 600 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTT 660 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 GCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGA 720 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCA 780 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCC 840 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 AGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTG 900 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAATGTACA 960 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGG 1020 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 GGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTT 1080 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGAT 1140 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 GGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGA 1200 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCT 1260 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 GGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGAT 1320 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TGGGTACATCAAGTCTGAGTACAACATCAGCCATGTGACCATTCAGATTGAGCGCGAGTA 1380 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 GGCTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCA 1440 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 TCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCT 1500 consensus_13796#1 ------------------------------------------------------------ consensus_13796#0 CTGCAGTGCAAATCAGATCAGCAGAGTCCAACAATTCCTGCAGGTTCATCTGAATGTTAG 1560 consensus_13796#1 -------------------------------------------GTGCATCAGAAGAATAG 17 ** **** *** *** consensus_13796#0 CTTCTGATG-CTGTTTATTA----CTATAAGTACGTG-TTATTAGTACTATCTTAGTCAA 1614 consensus_13796#1 CAGCTGATGACTGCTGATTATCAACTATAAGTACGTGATTAATAGTACTATCATACTCAA 77 * ****** *** * **** ************* *** ********** ** **** consensus_13796#0 TTAGGTGAGTTGATGTTAATCAGTTTCG-TAGTCGGTTGTATTCAC-ATGGGTGCAGTTT 1672 consensus_13796#1 TTAGGTGAGTAGATGTTAACCAGTTTCGATAGTCGGTGGAATTAACCATGGGTGCAGTTT 137 ********** ******** ******** ******** * *** ** ************* consensus_13796#0 TCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAG 1732 consensus_13796#1 TCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAG 197 ************************************************************ consensus_13796#0 CGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTT 1792 consensus_13796#1 CGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTT 257 ****************************************************** ***** consensus_13796#0 TCGTTTGGCCTTAAAAAAAAAAAAAA 1818 consensus_13796#1 TCGTT--------------------- 262 ***** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||