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Oryza sativa
cluster # 13798 cluster # 13798       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13798#0 length = 1567 sequences # 10  
consensus_13798#1 length = 1229 sequences # 4  

consensusID : consensus_13798#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1567
fasta sequence
                              [CAATTCCACTGGCAGATAAAAATCCCCAATCTCACGCGTCCTCCCCTTCCACCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGATCCTGCTG-TTGTTGACAGAGTGATTGAGGACAACCATGTTATTAATGGAAAGGAGGTTGAAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAGGATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAACCAAAGAAACCCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATGGTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCACCTGGAA-GTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGG-CCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCT-ATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGATGCAACTGGAGCATATTTTCTGTGGATCTTTCCTATCATAGGCTTGATATGATGGCGATGAAAAAAA]

[+] EMBL CF278647             [CAATTCCACTGGCAGATAAAAATCCCCAATCTCACGCGTCCTCCCCTTCCACCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGATCCTGCTG TTGTTGACAGAGTGATTGAGGACAACCATGTTATTAATGGAAAGGAGGTTGAAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CK085101             [                   AAATCCCCAATCTCACGCGTCCTCCCCTTCCACCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGATCCTGCTG TTGTTGACAGAGTGATTGAGGACAACCATGTTATTAATGGAAAGGAGGTTGAAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSS14776A            [                           AATCTCACGCGTCCTCCCCTTCCACCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAG CCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGATCCTGCTG TTGTTGACAGAGTGATTNAGGACAACCATGTTATTAATGGAAAGGAGGTTG AATTAAGAGACNTATTCCAAAGGGTGCTG CCCCCTAAAAGATTTCAAGACG AGAAAATATTTGTTGGTGGATancc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSAA31854            [                                         TCCCCTTCCACCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAGATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGAT CTGCTG TTGTTGACAGAGTGATTGAGGAC ACCATGTTATTAATGGAAAGGAGGTTGAAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU056735             [                                                CCACCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAG CCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGANATAGTTGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU030447             [                                                   CCCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCAAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGANCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTANCTTTGCAGATNCTGCTGTTTGTTGACAGAGTGATTGAGGNCCACCATGTTATTTATGGGAAGGAGGTTG AATTAAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSS4681A             [                                                    CCGCCTCTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCAGGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGATCCTGCTG TTGTTGACAGAGTGATTNAGGACAACCATGTTATTAATGGAAAGGAGGTTGAAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGGAGGAAATATTTGTTGGTGGGTTACCATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK121802             [                                                          CTTCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCAAGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGGACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCGTCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAGATCCTGCTG TTGTTGACAGAGTGATTGAGGACAACCATGTTATTAATGGAAAGGAGGTTGAAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAGGATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAACCAAAGAAACCCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATGGTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCACCTGGAA GTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGG CCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCT ATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGG                                                                                                     ]
[+] EMBL AU089756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATAGATCACTTGGAANGTTTTGCCACTAGGCCTGGTGGTTACAGTAGTTCTTATGGCCCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCT ATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAaaa                                                                                                            ]
[+] EMBL AU030448             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCTAATNCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGNTGGCAGTTATGCTGGTGGTTTAGNTGGTGCATATGGGCNTGATGCTGGGGGTTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAAGAGGCTATGGTNGCAGTGGTGCTGGTGCTTCTGGTCGTNATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGNTACTAGACAAGGCAAGATAAATTATCTGCAGNTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTTAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGATGCAACTGGAGCATATTTTCTGTGGATCTTTCCTATCATAGGCTTGATATGATGGCGATGAAAAAAA]


>consensus_13798#0 CAATTCCACTGGCAGATAAAAATCCCCAATCTCACGCGTCCTCCCCTTCCACCCGCCTCT TCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCA AGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGG ACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCG TCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAG ATCCTGCTGTTGTTGACAGAGTGATTGAGGACAACCATGTTATTAATGGAAAGGAGGTTG AAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGAAGAAAA TATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGA AATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAG GATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAG GCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAACCAAAGAAAC CCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATG GTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCAC CTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGGCCCTGGTGACTATG GTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCT ATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCA GTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTTGGTGGTTCTA GCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGG GTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTT ATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTG CAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGA AGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATG TACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTG GCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCT TTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGA TGCAACTGGAGCATATTTTCTGTGGATCTTTCCTATCATAGGCTTGATATGATGGCGATG AAAAAAA



consensusID : consensus_13798#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1229
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGTTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAGGATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAAGCAAAGAAACCCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATGGTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCACCTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGGCCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCTATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGC-TCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGATGCAACTGGAGCATATTTTCTGTGGATCTTTCCTGTCATAGGCTTGATATGATGGCGATGAAGTATCTTGAATTCATAGTAGTAAAAAAAAAAAAAAAAAGGCCACAT]

[+] EMBL AK104999             [TTCCTCGAGCACTGTTGGCCTACTGGTTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAGGATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAAGCAAAGAAACCCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATGGTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCACCTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGGCCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCTATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGC TCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGATGCAACTGGAGCATATTTTCTGTGGATCTTTCCTGTCATAGGCTTGATATGATGGCGATGAAGTATCTTGAATTCATAGTAGTAAAAAAAAAAAAAAAAAGGCCACAT]
[-] EMBL CF278648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGGTAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGC TCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAaaaaaa                                                                                                                                                                                   ]
[+] EMBL AU056736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGC TCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGATGCAACTGGAGCATATTTTCTGTGGATCTTTCCTATCATAGGCTTGATATGATGGCGATGAAGTATCTTGAAaaaa                                ]
[-] EMBL OSAA31861            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTTGAAGTTTAATTTGCTAAGGNTATGTACCTCTCCTGCTAGAATTGGCTTTGGTAAGGTTTATGTACGCCTGTTAGATTGGCTTCTGCTAAGGNTGCTGTACCACTCCTGAATCCTGTTAGANTGGCTTGTAGAATTTAAAATCAATTTTTCAGTGTTTAGGATTCAAGAGATCGCACATAg                                                                                                                                                                           ]


>consensus_13798#1 TTCCTCGAGCACTGTTGGCCTACTGGTTCAAGACGAAGAAAATATTTGTTGGTGGATTAC CATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGG AACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAGGATTTGGATTTGTAGTCT TTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAGGCAATATGATTGATCTAA ATGGTTCTCAGGTGGAGATCAAGAAGGCCGAAGCAAAGAAACCCTCTAACCCACCTCATC GTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATGGTTATGATGGATTGGGCA ACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCACCTGGAAGTTTTGGCACTA GGCCTGGTGGTTACAGTAGTTCTTATGGCCCTGGTGACTATGGTAGTGGCTATGGTGCTT ATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCTATTCTAGTCGCTTTGGTA GCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAG GTGGTGCATATGGGCGTGATGCTGGGGGTTTGGTGGTTCTAGCTATGGCCCTAGTTATGA CTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAG AGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTTATCATCCATATGCAAGGTA GACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGAC AAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTT ATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATGTACGCCTGTTAGATTGGCT CTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTGGCTTGTAGAATTTAAAATC ACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCTTTGATTAGATAGCAAAGTC ACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGATGCAACTGGAGCATATTTT CTGTGGATCTTTCCTGTCATAGGCTTGATATGATGGCGATGAAGTATCTTGAATTCATAG TAGTAAAAAAAAAAAAAAAAAGGCCACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13798#0      CAATTCCACTGGCAGATAAAAATCCCCAATCTCACGCGTCCTCCCCTTCCACCCGCCTCT 60
consensus_13798#1      ------------------------------------------------------------
                                                                                   

consensus_13798#0      TCCAACGAAACGCGAAACCCTAGCCCGTCTGATCTCTCTCTATCGCCATGGCCGGCGGCA 120
consensus_13798#1      ------------------------------------------------------------
                                                                                   

consensus_13798#0      AGATGAAGGAGCACGACGGCGCCAGCCCAGCCAAAATCTTCATCGGCGGGCTGCCTAAGG 180
consensus_13798#1      ------------------------------------------------------------
                                                                                   

consensus_13798#0      ACACCACCATGGGTACTTTCAAAGAATACTTTGGGAAGTATGGGGAGATAGTTGATGCCG 240
consensus_13798#1      ------------------------------------------------------------
                                                                                   

consensus_13798#0      TCATAATGAAGGACCGCTTTACCCAGAAACCCAGAGGATTTGGATTTATTACCTTTGCAG 300
consensus_13798#1      ------------------------------------------------------------
                                                                                   

consensus_13798#0      ATCCTGCTGTTGTTGACAGAGTGATTGAGGACAACCATGTTATTAATGGAAAGGAGGTTG 360
consensus_13798#1      ------------------------------------------------------------
                                                                                   

consensus_13798#0      AAATTAAGAGAACTATTCCAAAGGGTGCTGCCCCCCTAAAAGATTTCAAGACGAAGAAAA 420
consensus_13798#1      ----------------TTCCTCGAGCACTGTTGGCCTACTGG--TTCAAGACGAAGAAAA 42
                                       * *   * *  ***    ****   *  ****************

consensus_13798#0      TATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGA 480
consensus_13798#1      TATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTCAAGGAGTTCTTTTCGA 102
                       ************************************************************

consensus_13798#0      AATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAG 540
consensus_13798#1      AATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCAACTAACCGGTCACGAG 162
                       ************************************************************

consensus_13798#0      GATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAG 600
consensus_13798#1      GATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAATTATTAGCTAAGAAAG 222
                       ************************************************************

consensus_13798#0      GCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAACCAAAGAAAC 660
consensus_13798#1      GCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCCGAAGCAAAGAAAC 282
                       ************************************************** *********

consensus_13798#0      CCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATG 720
consensus_13798#1      CCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGCCGTCCACATGCGGATG 342
                       ************************************************************

consensus_13798#0      GTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCAC 780
consensus_13798#1      GTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTTGGCCCCTATAGATCAC 402
                       ************************************************************

consensus_13798#0      CTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGGCCCTGGTGACTATG 840
consensus_13798#1      CTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTATGGCCCTGGTGACTATG 462
                       ************************************************************

consensus_13798#0      GTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCT 900
consensus_13798#1      GTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGTGGAGAATCATCTCTCT 522
                       ************************************************************

consensus_13798#0      ATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCA 960
consensus_13798#1      ATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGTGGTTATGCTGGTGGCA 582
                       ************************************************************

consensus_13798#0      GTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTTTGGTGGTTCTA 1020
consensus_13798#1      GTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGGGGTTT-GGTGGTTCTA 641
                       ************************************************* **********

consensus_13798#0      GCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGG 1080
consensus_13798#1      GCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGTGTTGGCTTTGGCACGG 701
                       ************************************************************

consensus_13798#0      GTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTT 1140
consensus_13798#1      GTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCTGGTGCTTCTGGTCGTT 761
                       ************************************************************

consensus_13798#0      ATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTG 1200
consensus_13798#1      ATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGTGTGTTAGATAAGCTTG 821
                       ************************************************************

consensus_13798#0      CAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGA 1260
consensus_13798#1      CAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCTAGAAAAGAAGAGTTGA 881
                       ************************************************************

consensus_13798#0      AGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATG 1320
consensus_13798#1      AGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGCTCTGCTAAGGTTTATG 941
                       ************************************************************

consensus_13798#0      TACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTG 1380
consensus_13798#1      TACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCTGACTCCTGTTAGATTG 1001
                       ************************************************************

consensus_13798#0      GCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCT 1440
consensus_13798#1      GCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAGAGATCGCACATATGCT 1061
                       ************************************************************

consensus_13798#0      TTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGA 1500
consensus_13798#1      TTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTATTTAGTCGATTTGAGA 1121
                       ************************************************************

consensus_13798#0      TGCAACTGGAGCATATTTTCTGTGGATCTTTCCTATCATAGGCTTGATATGATGGCGATG 1560
consensus_13798#1      TGCAACTGGAGCATATTTTCTGTGGATCTTTCCTGTCATAGGCTTGATATGATGGCGATG 1181
                       ********************************** *************************

consensus_13798#0      AAAAAAA----------------------------------------- 1567
consensus_13798#1      AAGTATCTTGAATTCATAGTAGTAAAAAAAAAAAAAAAAAGGCCACAT 1229
                       **  *                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)