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Oryza sativa
cluster # 13799 cluster # 13799       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13799#0 length = 2373 sequences # 5  
consensus_13799#1 length = 817 sequences # 6  
consensus_13799#2 length = 754 sequences # 2  
consensus_13799#3 length = 684 sequences # 1  

consensusID : consensus_13799#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2373
fasta sequence
                              [CTCGGAATCTCTGCGCGCGATGGCCGGAGGCGGCGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTAACACCTGCTCCGCCGCGCCAACCACCCTTCCCCCCTGCTCTAATTAATTCCGCACTTGTTAATTTTTGATCTGCTACACTGGTGCCTGTTTCTACATGAGAAATTATAATATATGTGGTGGAAAGGGGGAAATCAATGCCAGATGCTGGAAATAATGGCTTTGTGGTTTAGTTTCATGTTTAGGGTGGGGGTATTGGGATGGGCGACAAACGTGCATCCTCTTCTTTGGGGGAAATCTTGATCAACCTAAAGCTTATTATGCTACCTCTGCACACCAGTATTATGCCCTTTTTTACTGTATATGCTTAGTTTTTAGGCTTGTTAGAAACCGAGAAGACCGCAGTGCTCGCTCATATTTTTAGTCGCGTTGTTGCTGTCATAGTTTAAAGAGTTGGGAGTTTTAATGAATAATAACAGTGGAAATAGAGAGACAACCAAAGGGATATATGTGGAATGTTTGGCTTTCTTTTGCCATTCCAACCAAGCTCTGCATCTTGCAATAAAATTTACAGTTGTTCTGACAGAGTTTTGATATGGATGATTTCTGTTAGTGGTTCAAGTACTGAGAGCAATTTATCATCAAGAAAAACGACATTTGTCTGGGACCATGCTATTAATTATTTGCCTTTCTTGTTGGAATTTATTTATTTTCAGCTGCTGTTTATTTATATTTATTTATTGTGTATTTGATATCCATATATAAAATTAGAAAATTACCATTAAGCATGCTGAGTAAATGACTAGTGTGTGTGTCTTTATTCCTTTCATTGGGTTTGTGCGGGATGGCTGGTTGGTGTGCGTGTGCTTCGGTGCGTTGTCTCCCTGGTGTGCTGGTTGGTTTATGCGCCAAATGGATGAATAGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATACTTCTTCCACATTAGGAACTAAGCGGTTGGCGTCAGAGGAACTTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTCTGGGCAGGT-CTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCC-TTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAACCTTCCTTTTGCTGTTTTAAAAAAAAAAAAAAAAAAAAAAACTAA]

[+] EMBL AK065187             [CTCGGAATCTCTGCGCGCGATGGCCGGAGGCGGCGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTAACACCTGCTCCGCCGCGCCAACCACCCTTCCCCCCTGCTCTAATTAATTCCGCACTTGTTAATTTTTGATCTGCTACACTGGTGCCTGTTTCTACATGAGAAATTATAATATATGTGGTGGAAAGGGGGAAATCAATGCCAGATGCTGGAAATAATGGCTTTGTGGTTTAGTTTCATGTTTAGGGTGGGGGTATTGGGATGGGCGACAAACGTGCATCCTCTTCTTTGGGGGAAATCTTGATCAACCTAAAGCTTATTATGCTACCTCTGCACACCAGTATTATGCCCTTTTTTACTGTATATGCTTAGTTTTTAGGCTTGTTAGAAACCGAGAAGACCGCAGTGCTCGCTCATATTTTTAGTCGCGTTGTTGCTGTCATAGTTTAAAGAGTTGGGAGTTTTAATGAATAATAACAGTGGAAATAGAGAGACAACCAAAGGGATATATGTGGAATGTTTGGCTTTCTTTTGCCATTCCAACCAAGCTCTGCATCTTGCAATAAAATTTACAGTTGTTCTGACAGAGTTTTGATATGGATGATTTCTGTTAGTGGTTCAAGTACTGAGAGCAATTTATCATCAAGAAAAACGACATTTGTCTGGGACCATGCTATTAATTATTTGCCTTTCTTGTTGGAATTTATTTATTTTCAGCTGCTGTTTATTTATATTTATTTATTGTGTATTTGATATCCATATATAAAATTAGAAAATTACCATTAAGCATGCTGAGTAAATGACTAGTGTGTGTGTCTTTATTCCTTTCATTGGGTTTGTGCGGGATGGCTGGTTGGTGTGCGTGTGCTTCGGTGCGTTGTCTCCCTGGTGTGCTGGTTGGTTTATGCGCCAAATGGATGAATAGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATACTTCTTCCACATTAGGAACTAAGCGGTTGGCGTCAGAGGAACTTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTCTGGGCAGGT CTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAACCTTCCTT                                     ]
[+] EMBL BP184830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tctgcaccGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATACTTCTTCCACATTAGGAACTAAGCGGTTGGCGTCAGAGGAACTTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAACAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSR18541A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGGGTTGATTGGCTTTGTAGCTGTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATACTTCTTCCACATTAGG ACTAAGCGGTTGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB000058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGGCCATACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCCCTTCCCTCTGGGCAGGT CTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATCTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGATCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCC TTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAACCTTCCTTTTGCTGTTTTAAAAAAAAAAAAAAAAAAAAAAACTAA]
[+] EMBL AU101453             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGCAGGTCCTCAGCAATGCCTGGCCTAATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGANCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCC TTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAACCTTCCTTTTGCTGTTTAAAAAAAAAA                  ]


>consensus_13799#0 CTCGGAATCTCTGCGCGCGATGGCCGGAGGCGGCGGCGCGGGCTCCTCCACGGGCGGCTC CGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTA CGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACAC CCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTAACACCTG CTCCGCCGCGCCAACCACCCTTCCCCCCTGCTCTAATTAATTCCGCACTTGTTAATTTTT GATCTGCTACACTGGTGCCTGTTTCTACATGAGAAATTATAATATATGTGGTGGAAAGGG GGAAATCAATGCCAGATGCTGGAAATAATGGCTTTGTGGTTTAGTTTCATGTTTAGGGTG GGGGTATTGGGATGGGCGACAAACGTGCATCCTCTTCTTTGGGGGAAATCTTGATCAACC TAAAGCTTATTATGCTACCTCTGCACACCAGTATTATGCCCTTTTTTACTGTATATGCTT AGTTTTTAGGCTTGTTAGAAACCGAGAAGACCGCAGTGCTCGCTCATATTTTTAGTCGCG TTGTTGCTGTCATAGTTTAAAGAGTTGGGAGTTTTAATGAATAATAACAGTGGAAATAGA GAGACAACCAAAGGGATATATGTGGAATGTTTGGCTTTCTTTTGCCATTCCAACCAAGCT CTGCATCTTGCAATAAAATTTACAGTTGTTCTGACAGAGTTTTGATATGGATGATTTCTG TTAGTGGTTCAAGTACTGAGAGCAATTTATCATCAAGAAAAACGACATTTGTCTGGGACC ATGCTATTAATTATTTGCCTTTCTTGTTGGAATTTATTTATTTTCAGCTGCTGTTTATTT ATATTTATTTATTGTGTATTTGATATCCATATATAAAATTAGAAAATTACCATTAAGCAT GCTGAGTAAATGACTAGTGTGTGTGTCTTTATTCCTTTCATTGGGTTTGTGCGGGATGGC TGGTTGGTGTGCGTGTGCTTCGGTGCGTTGTCTCCCTGGTGTGCTGGTTGGTTTATGCGC CAAATGGATGAATAGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAAT GTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGC CAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGA ACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGC CTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACA ACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCT GTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCAT CAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATACTTCTTCCACATTAGGAA CTAAGCGGTTGGCGTCAGAGGAACTTGCCAATGAATGGGATAACAAAAGGCTTAATCCAG GAAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGC AAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAA TAGCGTTACCCTCTGGGCAGGTCTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAAT GGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCT TTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTG CTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACC TGAGCGGCCAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTA AATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGT CCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAAT AATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTAT TGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGT ATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAACCTTCCTTTTGC TGTTTTAAAAAAAAAAAAAAAAAAAAAAACTAA



consensusID : consensus_13799#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 817
fasta sequence
                              [ACCCTAGGCCAGGCCGGAGCGGAGGCGGAGTCTCCATTCTTCTCCCAAATCCGAATATACCC-TTCTCACCTCGCGTAGATCCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGGCGG-CGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGC-TGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATA]

[+] EMBL CB676613             [ACCCTAGGCCAGGCCGGAGCGGAGGCGGAGTCTCCATTCTTCTCCCAAATCCGAATATACCC TTCTCACCTCGCGTAGATCCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGGCGG CGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGC TGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACT                                                                                       ]
[+] EMBL CB685577             [ACCCTATGCCAGGCCGGAGCGGAGGCGGAGTCTCCATTCTTCTCCCAAATCCGAATATACCC TTCTCACCTCGCGTAGATCCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGGCGG CGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGATGGGGAAACCTTTACTACGCGTTGAGGTCGCGGGGAAACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB675304             [                      AGGCGGAGTCTCCATTCTTCTCCCAAATCCGAATATACCCGTTCTCACCTCGCGTAGATCCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGGCGG CGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGC TGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACT                                                                                       ]
[+] EMBL CB656795             [                                                gTCCGAATATACCC TTCTCACCTCGCGTACATTCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGGCGG CGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGC TGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATA]
[+] EMBL AU070023             [                                                          ACCC TTCTCACCTCGCGTAGATCCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGG GG CGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCANCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGA                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU069998             [                                                                                                                 CAAACCAAACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGA GCGGNCGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGAGGGAAGCAGCAATGCCAGCATTATCAATGGCAGG ATGGCCATGCCAGCTTATG AAATTATATTG TAGGATGCAAGGCCTTGCTTGGCTTTAAGATG ACATG ACTTTGGGATGG TTGCAATTC                                                                                                                                                                                                                                                                    ]


>consensus_13799#1 ACCCTAGGCCAGGCCGGAGCGGAGGCGGAGTCTCCATTCTTCTCCCAAATCCGAATATAC CCTTCTCACCTCGCGTAGATCCTCCTCCCCCTTCCTCCCAAACCAAATCCCCCAAACCAA ACCAAATCCCTCATTCCCACCTCGGAATCTCTGCGCGCGATGGCCGGAGGCGGCGGCGCG GGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGC GGCTGCGGCAACCGCAACTACGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGT CTCCTGGTCGACCCCAACACCCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGG ATCTGCACCGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAATGTGGC CTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGCCAGCT TATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGAACTTT GGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGCCTTAT GCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCA AATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGA TTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGC ATTCCCTCCACAACAATGAAAACCACAGTACCAGATA



consensusID : consensus_13799#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 754
fasta sequence
                              [TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTCTGGGCAGGTCTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAAAAAAAAAAGA]

[-] EMBL CB675305             [TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTCTGGGCAGGTCTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATTTCATTCGAAAAAAAAAAAGA]
[-] EMBL CB676614             [TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTCTGGGCAGGTCTCAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCCTCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACCTAAAAGGGTATGCTGTAATGC                             ]


>consensus_13799#2 TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCACTTTCAA CAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCC AGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTCTGGGCAGGTCT CAGCAATGCCTGGTCTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCA GCAACTGCAACAATCACAACTATGCATCTCGAGCCTTTTGCAACAGGTGCAAAACTCAGA AAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCT TGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTT TGGGGTTTCGATTCCCCAGTGCTTCAGCTGCTGTTAAATGTTTGCCCCTCAGTGCTTTAC CAGCGCGTTCTGTTGAAGTTTGCTATTTATTTTTGTCCGAAGCTTGAATAAAATGGTTCC TCAATGCACCAGCCTGCCATCTGGTTCTTTGGGAATAATTGAATTAGTTCTTTAGTAATT GGACGATGAACTAGACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTC CGTGAAGTCTTTGTAATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGT AATGCACATTCATTTCATTCGAAAAAAAAAAAGA



consensusID : consensus_13799#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence
                              [TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCCCTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTTTGGGCAGGTTTCAGCAATGCCTGGTTTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAATTGCAACAATCACAACTATGCATTTTGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGGTGTTAAATGTTTGCCCCTCAGTGCTTTTCCAGGGCGTTCTGCTGAACCCCTTCATTTCTTGTAGTCGCAAGTGGAAAAAAAAGGGTTCCTCCATGCGCCAACCGCGCATAGGGTTTTTGGGGAATAAATGAATTAGTTGTTTTGTTATGGGGGAATGGATTTGGGTGTAAGGGGGGGGAGTTTATTCGTTAGGGGATAAAAGTATCCTCGGAGAAGTAGAAGAAATCAGGTTC]

[-] EMBL CB685578             [TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCCCTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTTTGGGCAGGTTTCAGCAATGCCTGGTTTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCAGCAATTGCAACAATCACAACTATGCATTTTGAGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCTTCAGCTGGTGTTAAATGTTTGCCCCTCAGTGCTTTTCCAGGGCGTTCTGCTGAACCCCTTCATTTCTTGTAGTCGCAAGTGGAAAAAAAAGGGTTCCTCCATGCGCCAACCGCGCATAGGGTTTTTGGGGAATAAATGAATTAGTTGTTTTGTTATGGGGGAATGGATTTGGGTGTAAGGGGGGGGAGTTTATTCGTTAGGGGATAAAAGTATCCTCGGAGAAGTAGAAGAAATCAGGTTC]


>consensus_13799#3 TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAGGAAATGCAAGCTATCCCCTTTCAA CAGCAGGCACGGATAATTTATTTGGTGGTATTGAGCAAGGAGCTGGAAGCAGCAATGGCC AGACACCTTATTCCAAGTTTGACAATGGAAACTCAATAGCGTTACCCTTTGGGCAGGTTT CAGCAATGCCTGGTTTTATTGGAAAAGGAGCAAAATGGCGCGAAGGAGACTGGATGTGCA GCAATTGCAACAATCACAACTATGCATTTTGAGCCTTTTGCAACAGGTGCAAAACTCAGA AAGAGGCATCAGTTCATCCCGGTGTGTTATAGTTTGCTTGAGAGCCTTTGGTATGTAGCT TGAAGTTTCCTGGATCTGTTGTTGGTGATTAGTACCTGAGCGGCCAGGATTTGTTCCCTT TGGGGTTTCGATTCCCCAGTGCTTCAGCTGGTGTTAAATGTTTGCCCCTCAGTGCTTTTC CAGGGCGTTCTGCTGAACCCCTTCATTTCTTGTAGTCGCAAGTGGAAAAAAAAGGGTTCC TCCATGCGCCAACCGCGCATAGGGTTTTTGGGGAATAAATGAATTAGTTGTTTTGTTATG GGGGAATGGATTTGGGTGTAAGGGGGGGGAGTTTATTCGTTAGGGGATAAAAGTATCCTC GGAGAAGTAGAAGAAATCAGGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CTCGGAATCTCTGCGCGCGATGGCCGGAGGCGGCGGCGCGGGCTCCTCCACGGGCGGCTC 60
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CGGCGGCGGAGGGGGGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTA 120
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CGCGTTCCGGTCGCTGTGCAACCGGTGCAAGCAGCCCCGTCTCCTGGTCGACCCCAACAC 180
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CCCTCCCGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTAACACCTG 240
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CTCCGCCGCGCCAACCACCCTTCCCCCCTGCTCTAATTAATTCCGCACTTGTTAATTTTT 300
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GATCTGCTACACTGGTGCCTGTTTCTACATGAGAAATTATAATATATGTGGTGGAAAGGG 360
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GGAAATCAATGCCAGATGCTGGAAATAATGGCTTTGTGGTTTAGTTTCATGTTTAGGGTG 420
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GGGGTATTGGGATGGGCGACAAACGTGCATCCTCTTCTTTGGGGGAAATCTTGATCAACC 480
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      TAAAGCTTATTATGCTACCTCTGCACACCAGTATTATGCCCTTTTTTACTGTATATGCTT 540
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      AGTTTTTAGGCTTGTTAGAAACCGAGAAGACCGCAGTGCTCGCTCATATTTTTAGTCGCG 600
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      TTGTTGCTGTCATAGTTTAAAGAGTTGGGAGTTTTAATGAATAATAACAGTGGAAATAGA 660
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GAGACAACCAAAGGGATATATGTGGAATGTTTGGCTTTCTTTTGCCATTCCAACCAAGCT 720
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CTGCATCTTGCAATAAAATTTACAGTTGTTCTGACAGAGTTTTGATATGGATGATTTCTG 780
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      TTAGTGGTTCAAGTACTGAGAGCAATTTATCATCAAGAAAAACGACATTTGTCTGGGACC 840
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      ATGCTATTAATTATTTGCCTTTCTTGTTGGAATTTATTTATTTTCAGCTGCTGTTTATTT 900
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      ATATTTATTTATTGTGTATTTGATATCCATATATAAAATTAGAAAATTACCATTAAGCAT 960
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GCTGAGTAAATGACTAGTGTGTGTGTCTTTATTCCTTTCATTGGGTTTGTGCGGGATGGC 1020
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      TGGTTGGTGTGCGTGTGCTTCGGTGCGTTGTCTCCCTGGTGTGCTGGTTGGTTTATGCGC 1080
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CAAATGGATGAATAGGTTGCAGTAACAATAATTATGCATCCAGAAAGAACTGCAAAAAAT 1140
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GTGGCCTGCCGAAGGAGGAAGCAGCAATGCCAGCATTATCAATGGCAGGAATGGCCATGC 1200
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CAGCTTATGCAAATTATATTGCTAGGATGCAAGGCCTTGCTGGCTTTAAGATGAACATGA 1260
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      ACTTTGGGATGGCTGGCAATTCAGCTTTGCAACAGCAGCTACTTGCAAGTGCAAACTGGC 1320
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CTTATGCGTTGGCTGGTAGATATGGGATGCAAGCTGCTGGCTGGCCATTTGGCGGCAACA 1380
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      ACGCAAATCAGTTTTCAGCGGCTCCAAAAGACTGGCGTAGCGGTGATTGGCTTTGTAGCT 1440
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      GTGGATTTCATAACTACTCATCTCGCACACAGTGTAAACAGTGTAGTGCTCCTGTACCAT 1500
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------------------------------------------
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      CAGGCATTCCCTCCACAACAATGAAAACCACAGTACCAGATACTTCTTCCACATTAGGAA 1560
consensus_13799#1      ------------------------------------------------------------
                                                                                   

consensus_13799#2      ------------------------TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAG 36
consensus_13799#3      ------------------------TTGCCAATGAATGGGATAACAAAAGGCTTAATCCAG 36
consensus_13799#0      CTAAGCGGTTGGCGTCAGAGGAACTTGCCAATGAATGGGATAACAAAAGGCTTAATCCAG 1620
consensus_13799#1      -------------------ACCCTAGGCCAGGCCGGAGCGGAGGCGGAGTCTCCATTCTT 41
                                                 ****       *   *     ** **  ** *  

consensus_13799#2      G----AAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATT 92
consensus_13799#3      G----AAATGCAAGCTATCCCCTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATT 92
consensus_13799#0      G----AAATGCAAGCTATCCACTTTCAACAGCAGGCACGGATAATTTATTTGGTGGTATT 1676
consensus_13799#1      CTCCCAAATCCGAA-TATACCCTTCTCACCTCGCGTA-GATCCTCCTCCCCCTTCCTCCC 99
                            **** * *  *** * ***   **  *  * * *       *      *  *   

consensus_13799#2      GAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAA-TGGAAA 151
consensus_13799#3      GAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAA-TGGAAA 151
consensus_13799#0      GAGCAAGGAGCTGGAAGCAGCAATGGCCAGACACCTTATTCCAAGTTTGACAA-TGGAAA 1735
consensus_13799#1      AAACCAAATCCCCCAAAC--CAA--ACCAAATCCCTCATTCCCACCTCGGAATCTCTGCG 155
                        * * *    *   ** *  ***   *** *  *** ***** *  * *  *  *     

consensus_13799#2      CTCAATAGCGTTACCCTCTGGGCAGGTCTCAGCAATGCCTGGTCTTATTGGAAAAGGAGC 211
consensus_13799#3      CTCAATAGCGTTACCCTTTGGGCAGGTTTCAGCAATGCCTGGTTTTATTGGAAAAGGAGC 211
consensus_13799#0      CTCAATAGCGTTACCCTCTGGGCAGGTCTCAGCAATGCCTGGTCTTATTGGAAAAGGAGC 1795
consensus_13799#1      CGCGATGGCCGGAGGCGGCGGCGCGGGCTCCTCCACGGGCGGCTCCGGCGGCGGAGGGG- 214
                       * * ** **   *  *   **   **  **  * * *   **       **   *** * 

consensus_13799#2      AAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCG 271
consensus_13799#3      AAAATGGCGCGAAGGAGACTGGATGTGCAGCAATTGCAACAATCACAACTATGCATTTTG 271
consensus_13799#0      AAAATGGCGCGAAGGAGACTGGATGTGCAGCAACTGCAACAATCACAACTATGCATCTCG 1855
consensus_13799#1      -----GGCGGGAGGGCGACTGGGACTGCGGCGGCTGCGGCAACCGCAACTACGCGTTCCG 269
                            **** ** ** ******   *** **   ***  *** * ****** ** *   *

consensus_13799#2      AGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTAT- 330
consensus_13799#3      AGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTAT- 330
consensus_13799#0      AGCCTTTTGCAACAGGTGCAAAACTCAGAAAGAGGCATCAGTTCATCCCGGTGTGTTAT- 1914
consensus_13799#1      GTCGCTGTGCAACCGGTGCAAG---CAGCCCCGTCTCCTGGTCGACCCCAACACCCCTCC 326
                         *  * ****** *******    ***            **  * ***           

consensus_13799#2      --AGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGA 388
consensus_13799#3      --AGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGA 388
consensus_13799#0      --AGTTTGCTTGAGAGCCTTTGGTATGTAGCTTGAAGTTTCCTGGATCTGTTGTTGGTGA 1972
consensus_13799#1      CGACTCCAAGTGGCTCCCCCGCGCCGGCGACTGGATCTGCACCGGTTGCAGTAACAATAA 386
                         * *     **    **    *   *   ** **  *   * ** *    *     * *

consensus_13799#2      TTA-GTACCTGAGCGGC----CAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCT 443
consensus_13799#3      TTA-GTACCTGAGCGGC----CAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCT 443
consensus_13799#0      TTA-GTACCTGAGCGGC----CAGGATTTGTTCCCTTTGGGGTTTCGATTCCCCAGTGCT 2027
consensus_13799#1      TTATGCATCCAGAAAGAACTGCAAAAAATGTGGCCTGCCGAAGGAGGAAGCAGCAATGCC 446
                       *** * * *      *     **  *  ***  ***   *      **  *  ** *** 

consensus_13799#2      TCAGCTGCTGTTAA-ATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTG 502
consensus_13799#3      TCAGCTGGTGTTAA-ATGTTTGCCCCTCAGTGCTTTTCCAGGGCGTTCTGCTGAACCCCT 502
consensus_13799#0      TCAGCTGCTGTTAA-ATGTTTGCCCCTCAGTGCTTTACCAGCGCGTTCTGTTGAAGTTTG 2086
consensus_13799#1      AGCATTATCAATGGCAGGAATGGCCATGCCAGCTTATGCAAATTATATTGCTAGGATGCA 506
                            *     *   * *  ** ** *    ****   **     *  ** *        

consensus_13799#2      CTATTTATTTTTGTCCGAAGCTTGAATAAAA---TGGTTCCTCAATGCACCAGCCTGCCA 559
consensus_13799#3      TCATTTCTTGTAGTCGCAAGTGGAAAAAAAA---GGGTTCCTCCATGCGCCAACCGCGCA 559
consensus_13799#0      CTATTTATTTTTGTCCGAAGCTTGAATAAAA---TGGTTCCTCAATGCACCAGCCTGCCA 2143
consensus_13799#1      AGGCCTTGCTGGCTTTAAGATGAACATGAACTTTGGGATGGCTGGCAATTCAGCTTTGCA 566
                            *       *   *       *  **     ** *           ** *    **

consensus_13799#2      TCTG--GTTCTTTGGGAAT---AATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAG 614
consensus_13799#3      TAGG--GTTTTTGGGGAAT---AAATGAATTAGTTGTTTTGTTATGGGGGAATGGATTTG 614
consensus_13799#0      TCTG--GTTCTTTGGGAAT---AATTGAATTAGTTCTTTAGTAATTGGACGATGAACTAG 2198
consensus_13799#1      ACAGCAGCTACTTGCAAGTGCAAACTGGCCTTATGCGTTGGCTGGTAGAT-ATGGGATGC 625
                          *  * *  * *  * *   ** **   *  *   ** *      *   ***   *  

consensus_13799#2      ACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGT 674
consensus_13799#3      GGTGTAAGGGGGGGGAGTTTATTCGTTAGGGGATAAAAGTATCCTCGGAGAAGTAGAAGA 674
consensus_13799#0      ACTCTAATGTTGGGGATTTTATTGCTTTGTGAATCAAATGTACCTCCGTGAAGTCTTTGT 2258
consensus_13799#1      AAGCTGCTGGCTGGCCATTTGGCGGCAACAACGCAAATCAGTTTTCAGCGGCTCCAAAAG 685
                           *   *   **   ***               **       ** * *          

consensus_13799#2      AATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATT 734
consensus_13799#3      AATCAGGTTC-------------------------------------------------- 684
consensus_13799#0      AATCCTGTTTCAGTATTGTTGTATTGAACAGAAAATTGTATGCTGTAATGCACATTCATT 2318
consensus_13799#1      ACTGGCGTAGCGGTGATTGGCTTTGTAGCTGTGGATTTCATAAC-TACTCATCTCGCACA 744
                       * *   **                                                    

consensus_13799#2      TCATTCGAAAAAAAAAAAGA---------------------------------------- 754
consensus_13799#3      ------------------------------------------------------------
consensus_13799#0      TCATTCGAAACCTTCCTTTTGCTGTTTTAAAAAAAAAAAAAAAAAAAAAAACTAA----- 2373
consensus_13799#1      CAGTGTAAACAGTGTAGTGCTCCTGTACCATCAGGCATTCCCTCCACAACAATGAAAACC 804
                                                                                   

consensus_13799#2      -------------
consensus_13799#3      -------------
consensus_13799#0      -------------
consensus_13799#1      ACAGTACCAGATA 817
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)