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Oryza sativa
cluster # 13810 cluster # 13810       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13810#0 length = 1191 sequences # 13  
consensus_13810#1 length = 967 sequences # 1  

consensusID : consensus_13810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1191
fasta sequence
                              [TTCACGCCGGCCGCCCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT-----CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG-CATG-CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA-ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATA-GGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTCAATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGGGTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAATTGTACCATCTATATATGAACTGCAGAGAAAGCTTTGGGTACGGTTGCTTGTGTTCTACACTTTTTTTAGGTAAACCTCAAAGAGGACTGGGAGCAACTGTTTTCATTGAAG]

[+] EMBL AK070153             [TTCACGCCGGCCGCCCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTCGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATA GGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTCAATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGGGTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAATTGTACCATCTATATATGAACTGCAGAGAA                                                                                  ]
[+] EMBL AK104298             [ TCACGCCGGCCGCCCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATA GGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTCAATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGGGTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAATTGTACCATCTATATATGAACTGCAGAGAA                                                                                  ]
[+] EMBL CB662436             [            GCCCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTT                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB662435             [              CCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAANACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTT                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB662471             [              CCTGCTCCTCGTCGCCGGAGGAATCTGCGGCGCACGCGCTTCATCCTCATCCCCAGCTAAGTGGACTCTGCGTCACCGAGCGCCCGCGGCGGATCGCGTGCGGGATATAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCCAGTCCGGGCGCCGGCGATGGCGGACGACTCGGGCAGCGGGATGCGCGAGTACAGCATCATCGAGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTACACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCATGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAAGTTCCAATAACTTTTGTCGAT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB659507             [                 GCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C98656               [                     GTCGTCGCCGGCGGCATCTGCGGCGNGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCTTCGGATCGCNTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCNATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACANCGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCANGCACCTGCCGGATGTCAACTTTGAANTCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTTTAAAGCAGTTGCAGCANATATATGGTG AAACCGTGTTACCAGCTGCTGCGAGNTAGACCGAGGAAGCTAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB662437             [                                   nATCTGCGGCGCGCGCGCGTCATCCTCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAGAGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCATAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAATATATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAAAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB659508             [                                                                                                                                                                                                                                                                                                                                                                           ATGGTGAAAACCGTGTT     CTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAG CATG CCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATA GGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTCAATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGGGTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAATTGTACCATCTATATATGAACTGCAGAGAAAGCTTTGGGTACGGTTGCTTGTGTTCTACACTTTTTTTAGGTAAACCTCAAAGAGGACTGGGAGCAACTGTTTTCATTGAAG]
[-] EMBL CB662472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGGATTAAAG CATG CCTCTGGGGATTTCGTTGTTATCATGGATGCTGACCTATCTCGCCATCCGAAGTTCTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAAAACGGTGGTGTCCATGGTTGGAATTTCATGCGCAAGTTGTCTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTGCAGCCTGGAGCTTCTGATTTGCCTGGATCATTCAGGCTATATAA AGGGAATGTCCTAGAAGATTTAATCTCGTGGAGTGTCACCAAGGGATATGTTTTCCAAATGGAAAGGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATTTGAAAGGCCTTGTTTATTTGCTGCTCACTCCATA GGGAAAAAACCGGTAGGCGCTTACCTGTATCAGACACAACTAGTGATAGAGGAACTTCAATTTGTTATATCTCCAGTTTTGAGTTGCGTGAATTATTGATTTTCTGCCTTGCCAGTGGGTTCTCGTCCAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGCCAAGAACACAATTGTCCCATCTATATATGAACTGCAGAGAAA                                                                                 ]
[+] EMBL AU101110             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     GACTAAAGCCATGCCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGCGCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTTCTGATTTGACTGGATCATTCAGGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATA GGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTCAATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGGGTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAATTGTACCATCTATATATGAACTGCAGAGAAAGCTTTGGGTAaaaaa                                                                  ]
[+] EMBL AI978330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGCTATATAA ACGGAATGTCCTAGAAGATTTAATCTCCTCATGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAGGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATAGGGGAAAAAAACGCTAGGCGCTTAACTGTATCAGACACAACTTGTGATAGAAGGACTTCAATTTGNNATATCTACAGTTTTGAGTTGCATGAATTACTGATTTTCTGACTTGNNAGTGGGTTCNNNTACAGTNTATnnnnnnng                                                                                                                                                   ]
[-] EMBL AI978331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  caannnnTATGTTTTCCAANTNNNAATGATTGTTAGGGCTANCANNNAAGGTTATCACATTGAAGAGGTTNCAATAACTTTTGTCGATAGGGTTTTTNGAACTTCAAAACTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACATAGGGGAAAAAAACGCTAGGCGCTTAACTGTATCAGACACAACTTGTGATAGAAGGACTTCAATTTGTTATATCTACAGTTTTGAGTTGCATGAATTACTGATTTTCTGACTTGCCAGTGGGTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAtgat                                                                                                                           ]


>consensus_13810#0 TTCACGCCGGCCGCCCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCC TCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAG AGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACG ACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCA ACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCA TAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAA TATATGGTGAAAACCGTGTTCTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTG CATATTTACATGGACTAAAGCATGCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACC TATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTG ATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGC GCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAACATTACTACAGCCTGGAGCTT CTGATTTGACTGGATCATTCAGGCTATATAAACGGAATGTCCTAGAAGATTTAATCTCCT CGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAAG GTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAAC TTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACAT AGGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTCA ATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGGG TTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAAT TGTACCATCTATATATGAACTGCAGAGAAAGCTTTGGGTACGGTTGCTTGTGTTCTACAC TTTTTTTAGGTAAACCTCAAAGAGGACTGGGAGCAACTGTTTTCATTGAAG



consensusID : consensus_13810#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 967
fasta sequence
                              [GGCCGCCCTGCTCCTCGTCGCCGGCGGCATCTGCGGCGCGCGGGCGTCATCCTCGTCCCCAGCTAAGTGGCCTCACCGTCACCGAGCTCCCGCGTCGGATCGCGTGCGGAGAGAGCGAGGGGCGGAGAGATCTGGTGCTAGGTCAAGTCGGGGCGGCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTCCCGGATGTCAACTTTGAAATCATAATTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAGTATATGGTGAAAACCGTGTTCTGCTGCGAGCTAGACTGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAGCATGCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGGACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACAGGGCCCCGTTTTGTTCAGAACGGTGGTGTCCATGGTTGGAATCTTATGCGCAAAGTGACTAGCAGGGGAGCAAATGGTCTAGCACAAAACATTACTACAGGCTGGAGCTTCTGATTTGACTGGATCATTAGGCTTTTAAACCGGATGGCCTAGAGAATGAATCTCCTCATGTGTCGTCAGGGATATGTTTTCCAAATGGAAAGATGTGTAGGCTTCCCAGAAGGTGTCACATGGAGAGGGTCCAATCCTTTGGTGACAGGGTTTGGGACTTAAAATTGGTGGTTATAAATATATATTCCGATGGGCCTGCTACTTGCGTTCTTACTCGGGAAAGACCTAGCGCCTAACCATAAGAACCCTTGATAGAAGACTCATGTTGTTATGTAGTTAAGTTATTAATGTGTATTCGATGATTGGGGATGGGC]

[+] EMBL BE039791             [GGCCGCCCTGCTCCTCGTCGCCGGCGGCATCTGCGGCGCGCGGGCGTCATCCTCGTCCCCAGCTAAGTGGCCTCACCGTCACCGAGCTCCCGCGTCGGATCGCGTGCGGAGAGAGCGAGGGGCGGAGAGATCTGGTGCTAGGTCAAGTCGGGGCGGCGGCGATGGCGGACGACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTCCCGGATGTCAACTTTGAAATCATAATTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAGTATATGGTGAAAACCGTGTTCTGCTGCGAGCTAGACTGAGGAAGCTAGGACTTGGTACTGCATATTTACATGGACTAAAGCATGCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACCATCCGAAGGACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAACAGGGCCCCGTTTTGTTCAGAACGGTGGTGTCCATGGTTGGAATCTTATGCGCAAAGTGACTAGCAGGGGAGCAAATGGTCTAGCACAAAACATTACTACAGGCTGGAGCTTCTGATTTGACTGGATCATTAGGCTTTTAAACCGGATGGCCTAGAGAATGAATCTCCTCATGTGTCGTCAGGGATATGTTTTCCAAATGGAAAGATGTGTAGGCTTCCCAGAAGGTGTCACATGGAGAGGGTCCAATCCTTTGGTGACAGGGTTTGGGACTTAAAATTGGTGGTTATAAATATATATTCCGATGGGCCTGCTACTTGCGTTCTTACTCGGGAAAGACCTAGCGCCTAACCATAAGAACCCTTGATAGAAGACTCATGTTGTTATGTAGTTAAGTTATTAATGTGTATTCGATGATTGGGGATGGGC]


>consensus_13810#1 GGCCGCCCTGCTCCTCGTCGCCGGCGGCATCTGCGGCGCGCGGGCGTCATCCTCGTCCCC AGCTAAGTGGCCTCACCGTCACCGAGCTCCCGCGTCGGATCGCGTGCGGAGAGAGCGAGG GGCGGAGAGATCTGGTGCTAGGTCAAGTCGGGGCGGCGGCGATGGCGGACGACGCGGGCG GCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCAACGTCGCCC TCATCGTCTACCTCATCTTCAAGCACCTCCCGGATGTCAACTTTGAAATCATAATTGTGG ATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAGTATATGGTG AAAACCGTGTTCTGCTGCGAGCTAGACTGAGGAAGCTAGGACTTGGTACTGCATATTTAC ATGGACTAAAGCATGCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACCTATCTCACC ATCCGAAGGACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTGATGTTGTAA CAGGGCCCCGTTTTGTTCAGAACGGTGGTGTCCATGGTTGGAATCTTATGCGCAAAGTGA CTAGCAGGGGAGCAAATGGTCTAGCACAAAACATTACTACAGGCTGGAGCTTCTGATTTG ACTGGATCATTAGGCTTTTAAACCGGATGGCCTAGAGAATGAATCTCCTCATGTGTCGTC AGGGATATGTTTTCCAAATGGAAAGATGTGTAGGCTTCCCAGAAGGTGTCACATGGAGAG GGTCCAATCCTTTGGTGACAGGGTTTGGGACTTAAAATTGGTGGTTATAAATATATATTC CGATGGGCCTGCTACTTGCGTTCTTACTCGGGAAAGACCTAGCGCCTAACCATAAGAACC CTTGATAGAAGACTCATGTTGTTATGTAGTTAAGTTATTAATGTGTATTCGATGATTGGG GATGGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13810#0      TTCACGCCGGCCGCCCTGCTCGTCGTCGCCGGCGGCATCTGCGGCGCGCGCGCGTCATCC 60
consensus_13810#1      --------GGCCGCCCTGCTCCTCGTCGCCGGCGGCATCTGCGGCGCGCGGGCGTCATCC 52
                               ************* **************************** *********

consensus_13810#0      TCATCCCCAGCTAAGTGGCCTCACCGTCACCGAGCGCCCGCGTCGGATCGCGTGCGGGAG 120
consensus_13810#1      TCGTCCCCAGCTAAGTGGCCTCACCGTCACCGAGCTCCCGCGTCGGATCGCGTGCGG-AG 111
                       ** ******************************** ********************* **

consensus_13810#0      AGAGCGGGGGGCGGAGAGATCTGGTGCGAGGTCGAGTCGGGGCGCCGGCGATGGCGGACG 180
consensus_13810#1      AGAGCGAGGGGCGGAGAGATCTGGTGCTAGGTCAAGTCGGGGCGGCGGCGATGGCGGACG 171
                       ****** ******************** ***** ********** ***************

consensus_13810#0      ACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCA 240
consensus_13810#1      ACGCGGGCGGCGGCAGGCGCGAGTACAGCATCATCGTGCCCACCTACAACGAGCGCCTCA 231
                       ************************************************************

consensus_13810#0      ACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTGCCGGATGTCAACTTTGAAATCA 300
consensus_13810#1      ACGTCGCCCTCATCGTCTACCTCATCTTCAAGCACCTCCCGGATGTCAACTTTGAAATCA 291
                       ************************************* **********************

consensus_13810#0      TAGTTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAA 360
consensus_13810#1      TAATTGTGGATGATGGAAGCCCTGATGGAACTCAAGACATTGTAAAGCAGTTGCAGCAAG 351
                       ** ******************************************************** 

consensus_13810#0      TATATGGTGAAAACCGTGTTCTGCTGCGAGCTAGACCGAGGAAGCTAGGACTTGGTACTG 420
consensus_13810#1      TATATGGTGAAAACCGTGTTCTGCTGCGAGCTAGACTGAGGAAGCTAGGACTTGGTACTG 411
                       ************************************ ***********************

consensus_13810#0      CATATTTACATGGACTAAAGCATGCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACC 480
consensus_13810#1      CATATTTACATGGACTAAAGCATGCCTCTGGGGACTTCGTTGTTATCATGGATGCTGACC 471
                       ************************************************************

consensus_13810#0      TATCTCACCATCCGAAGTACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTG 540
consensus_13810#1      TATCTCACCATCCGAAGGACTTGCCAAGCTTCATTAGGAAGCAAAAGGAAACTGGTGCTG 531
                       ***************** ******************************************

consensus_13810#0      ATGTTGTAACTGGCACCCGTTATGTTCAGAACGGTGGTGTCCATGGTTGGAATCTCATGC 600
consensus_13810#1      ATGTTGTAACAGGGCCCCGTTTTGTTCAGAACGGTGGTGTCCATGGTTGGAATCTTATGC 591
                       ********** **  ****** ********************************* ****

consensus_13810#0      GCAAGTTGACTAGCAGGGGAGCAAATGTTCTAGCACAAA-CATTACTACAGCCTGGAGCT 659
consensus_13810#1      GCAAAGTGACTAGCAGGGGAGCAAATGGTCTAGCACAAAACATTACTACAGGCTGGAGCT 651
                       ****  ********************* *********** *********** ********

consensus_13810#0      TCTGATTTGACTGGATCATTCAGGCTATATAAACGGAATGTCCTAGAAGATTTAATCTCC 719
consensus_13810#1      TCTGATTTGACTGGATCATT-AGGCTTT-TAAACCGGATGGCCTAGAGAATG-AATCTCC 708
                       ******************** ***** * ***** * *** ******  **  *******

consensus_13810#0      TCGTGTGTCAGCAAGGGATATGTTTTCCAAATGGAAATGATTGTTAGGGCTACCAGGAAA 779
consensus_13810#1      TCATGTGTC-GTCAGGGATATGTTTTCCAAATGGAAA-GATGTGTAGGCTTCCCAGAA-- 764
                       ** ****** *  ************************ ***   ****  * **** *  

consensus_13810#0      GGTTATCACATTGAAGAGGTTCCAATAACTTTTGTCGATAGGGTTTTTGGAACTTCAAAA 839
consensus_13810#1      -GGTGTCACAT-GGAGAGGGTCCAAT--CCTTTGGTGACAGGGTTT--GGGACTT--AAA 816
                        * * ****** * ***** ******  * ****  ** *******  ** ****  ***

consensus_13810#0      CTTGGTGGATCTGAGATAGTTGAGTATCTGAAAGGCCTTGTTTATCTGCTGCTCACTACA 899
consensus_13810#1      ATTGGTGGTT-----ATAAATATATATTCCGATGGGCCTGCT-ACTTGC-GTTC-TTACT 868
                        ******* *     ***  *   ***    * ** * ** * *  *** * **  *** 

consensus_13810#0      TAGGGAAAAAACCGCTAGGCGCTTAACTGTATCAGACACAACTCGTGATAGAGGAACTTC 959
consensus_13810#1      CGGGAAAGA-----CCTAGCGCCTAACCATA------AGAACCCTTGATAGAAGA--CTC 915
                         ** ** *     *   **** ****  **      * *** * ******* **   **

consensus_13810#0      AATTTGTTATATCTACAGTTTTGAGTTGCGTGAATTACTGATTTTCTGACTTGCCAGTGG 1019
consensus_13810#1      ATGTTGTTATGTAGTTAAGTT--ATTAATGTGTATTCGATGATTGGGGATGGGC------ 967
                       *  ******* *    *  **  * *   *** ***      **   **   **      

consensus_13810#0      GTTCTCGTACAGTGTATTTGGTGTGTAAGTACACTTTCATGAGCAAGGGCAAGAACACAA 1079
consensus_13810#1      ------------------------------------------------------------
                                                                                   

consensus_13810#0      TTGTACCATCTATATATGAACTGCAGAGAAAGCTTTGGGTACGGTTGCTTGTGTTCTACA 1139
consensus_13810#1      ------------------------------------------------------------
                                                                                   

consensus_13810#0      CTTTTTTTAGGTAAACCTCAAAGAGGACTGGGAGCAACTGTTTTCATTGAAG 1191
consensus_13810#1      ----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)