These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 3228 fasta sequence [GCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTCCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGC-GTNTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT-GGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA-CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA---GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC-TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGA-CCGATT-GTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGGCAGTTTCCGCGCGNCGNCGTCGCCAGCAGCGCCCAGCACACCATCACCACCACCATCACCGGCTGCCTTTCTGCCGCTGCCTCACCATCACCACCATCTTCATCTTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTCTATATATATAATATATT] [+] EMBL AU068238 [GCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTCCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGCNGTNTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTT ] [+] EMBL AK111575 [ CCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGC GATTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCTCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCCCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT GGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTTCATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGGATGGTAGCAAGAAAAC ] [+] EMBL CB629153 [ CCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAGTTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTA CAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGTGGGGTTACCAGgg ] [+] EMBL CB629155 [ CCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAGTTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTA CAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT GGGTT ] [+] EMBL CB643920 [ CAGCTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT GGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCCTCT ] [-] EMBL CB629154 [ TGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAA ] [-] EMBL CB629156 [ AAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATGATTAATAGAAAGAGCAATGGAATTTGAAGAGA ] [+] EMBL AU068237 [ GGNCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACTAATACCAGTCTTGCATATTTCATCCAAGATATCCGANTGTTCTGATAGTTGGTGGTTN CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGANACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTNACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGANTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGANCGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAAaaa ] [+] EMBL BI809098 [ ATCCGAATGTTCTGATAGTTGGTGGTTACCCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAG AACCCGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGAC AATGAATGACTTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCCATGGAATTTGAAGAGAAAAaaaaaa ] [-] EMBL AK121155 [ TTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGA CCGATT GTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG ] [-] EMBL AU172661 [ ttTTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGA CCGATT GTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG ] [-] EMBL C73213 [ ATATGGGATTT AAAATGAATGGTAGCAANAAAACAATTCGTTTCAGATTTTGTCAGGGTCGANACCCTTGAGCACGGAGA CCGAAT GNTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGAACCGTGATGGACTGTGGTGTGNCGGTGCTCATGGCGGAGATGCCGACTTCGCCGANGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTNGCGG ] [-] EMBL C73352 [ cnCCTTAAGCACGGAGANCCGATTAGTTGTNCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCNTNATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGNAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACNCGTCGCGGCAGTTTCCGCGCGNCGNCGTCGCCAGCAGCGCCCAGCACACCATCACCACCACCATCACCGGCTGCCTTTCTGCCGCTGCCTCACCATCACCACCATCTTCATCTTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTCTATATATATAATATATT] consensusID : consensus_13812#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 993 fasta sequence [ATATGGCTTCACTTATCCTAAAGACAAGTACACTATTTTCCTCTCGCTATTAAGTCACAAAGCATTGACCGCCCTGGTGGTATCAATGTAAATAGCCGAGCACATATTACATGTCTTAAGAAAGTGCTACCTATATTAATTTCTTAGACAAATTGCTCCTCCTCGATAATATGTCTTGTGTGTCCAAAAGACTTTTAACCGTCGGAATGGCAACTGATTGATGGTCTTTGGTGTCATTTGTGCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGCAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGACCCGTGATGGACTGTGGTGTGGCTGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG] [-] EMBL AK111687 [ATATGGCTTCACTTATCCTAAAGACAAGTACACTATTTTCCTCTCGCTATTAAGTCACAAAGCATTGACCGCCCTGGTGGTATCAATGTAAATAGCCGAGCACATATTACATGTCTTAAGAAAGTGCTACCTATATTAATTTCTTAGACAAATTGCTCCTCCTCGATAATATGTCTTGTGTGTCCAAAAGACTTTTAACCGTCGGAATGGCAACTGATTGATGGTCTTTGGTGTCATTTGTGCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGCAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGACCCGTGATGGACTGTGGTGTGGCTGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13812#0 GCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTC 60 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAA 120 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGCGTNTCGATTGG 180 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 AGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGAT 240 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGT 300 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGA 360 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGA 420 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCC 480 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCA 540 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAA 600 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAA 660 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAA 720 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCT 780 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACA 840 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 AAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATC 900 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCC 960 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGAT 1020 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACA 1080 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCG 1140 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGG 1200 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACG 1260 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTC 1320 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CCCACCCTCAACTCCTTCCACTCACACACCTGGTGGTGGGTTACCAGTGGCTAGCAACAT 1380 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTC 1440 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTC 1500 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTC 1560 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAG 1620 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGG 1680 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 CCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGA 1740 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 AGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTAC 1800 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 ATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACA 1860 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGA 1920 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 GGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAA 1980 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 AGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCA 2040 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 AATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAA 2100 consensus_13812#1 --------------------------------ATATGGCTT-CACTTATCCTAAAGACAA 27 ** * * * * * ** ** consensus_13812#0 GGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTG 2160 consensus_13812#1 GTACACTATTTTCCTCTCGCTAT-TAAGTCACAAAGCATTGAC-CGCCCTGGTGGTATCA 85 * * * * *** * *** ** **** *** * ** *** *** * * consensus_13812#0 GGATGAAAAGG-GTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGG 2219 consensus_13812#1 ATGTAAATAGCCGAGCACATATTACATGTCTTAAG-AAAGTGCTACCTATATTAATTTCT 144 * ** ** * * ** * * *** * * * * * ** * ** * consensus_13812#0 TAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCA 2279 consensus_13812#1 TAG-ACAAATTGC--TCCTCCTCGA--TAATATGTCTTGTGTGTCCAAAAGACTTTTAAC 199 *** * * ** * *** ** *** ** ** ** * * * * * ** consensus_13812#0 TATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTAC-CAGACGATGGAGCTA 2338 consensus_13812#1 CGTCGGAATGGCAACTGATTGATGGTCT--TTGGTGTCATTTGTGCAGACGATGGAGCTA 257 * * * *** *** * * ** ** *************** consensus_13812#0 TGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCT 2398 consensus_13812#1 TGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCT 317 ************************************************************ consensus_13812#0 TTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAA 2458 consensus_13812#1 TTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAA 377 ************************************************************ consensus_13812#0 CTGTGGAAATGAAGAAGGATTGGAGATGAAGAG---AAGGGGCCTCAGCGCGACGGCTGC 2515 consensus_13812#1 CTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGC 437 ********************************* ************************ consensus_13812#0 CAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTAT 2575 consensus_13812#1 CAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTAT 497 ************************************************************ consensus_13812#0 TTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAG 2635 consensus_13812#1 TTTTGATTCGTTGGCTTCGTTACAGAAGGCAGCCCGTAATTTGTTATTATACTAGTTTAG 557 ***************************** ****************************** consensus_13812#0 ACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTT 2695 consensus_13812#1 ACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTT 617 ************************************************************ consensus_13812#0 GACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATG 2755 consensus_13812#1 GACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATG 677 ************************************************************ consensus_13812#0 GAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTA 2815 consensus_13812#1 GAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTA 737 ************************************************************ consensus_13812#0 TATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTC 2875 consensus_13812#1 TATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTC 797 ************************************************************ consensus_13812#0 GAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTG 2935 consensus_13812#1 GAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTG 857 ************************************************************ consensus_13812#0 CTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTC 2995 consensus_13812#1 CTGATCCTGACCCGTGATGGACTGTGGTGTGGCTGTGCTCATGGCGGAGATGCCGACTTC 917 ********** ********************** ************************** consensus_13812#0 GCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGC 3055 consensus_13812#1 GCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGC 977 ************************************************************ consensus_13812#0 GAGGCACTCGTCGCGGCAGTTTCCGCGCGNCGNCGTCGCCAGCAGCGCCCAGCACACCAT 3115 consensus_13812#1 GAGGCACTCGTCGCGG-------------------------------------------- 993 **************** consensus_13812#0 CACCACCACCATCACCGGCTGCCTTTCTGCCGCTGCCTCACCATCACCACCATCTTCATC 3175 consensus_13812#1 ------------------------------------------------------------ consensus_13812#0 TTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTCTATATATATAATATATT 3228 consensus_13812#1 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Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||