These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13835#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2863 fasta sequence [CCCTCGATTCCCATTTGATCCCACACCTCCACCAACTAGCTGCCACGCTCGCTTTCCCCTGCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGCCAGGCTCGGCTCCTCGATCGACGCCATGTCGCTGCGCCGGCTCTGCTTCGTGCTGCCCATGGACGCCGACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGCCTCGACGACGAGGGATGGCAGCGAGCGGGAGGCTGGCGTCGTACGTCCGCCGCAAGGTCGGCCGCGCGCTGCGGTGCGGGCTCTGCGGCGCCTGGTGCCACCACCGCTCGTCGGGAGTCTGCAGCTTCGAGGACATCGCCGGCGTGGACGCGGTCGGCGCGGGGAAGCTCGGCGGAGGCGCGGGCGGGAGCCCCAGGATCTTCAGCTACTCGGAGCTCTACATCGGGACCAGTGGGTTCAGCGACACGGAGATCCTGGGCAGCGGAGGGTTCGGGCGGGTGTACCGCGCCGTGCTGCCGAGCGACGGCACGACGGTGGCCGTCAAGTGCGTCGCCGGCCGCGGCGACCGGTTCGAGAAGTCCTTCCTGGCGGAGCTGGCGGCGGTGGCGCGGCTGCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCGTTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC-GTCGGTTGTCC-GATGAGGGGAAGCTGCTCGAC-GC-CGGCGACC-GCAAGCTGCC-GGAC-GGC-AGCTAC-CC-GCTGTTC-GACATGGGCCGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATGAAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTC-CGGCGACCTGCCACC-GCTTCCGTCCTTCCTAGCTCTCCCA-AAGTACGTCTCTCTCACTTCCCCCTCC-GATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCAC-CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCCCGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATGGTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGCAATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGCCCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGGAACCTCGTCCAGCTGCGCGGCTGGTGCACGGAGCACGGCGAGATGCTCGTCGTCTACGACTACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCCGCCGTCCTCCCGTGGCGCCACCGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTGTACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC-AGACGGCTGGACGGCCAGG-TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAATTTCGTTCTTCAAAACCGAAAAAAANAAAAAAAAAAA] [+] EMBL AK073557 [CCCTCGATTCCCATTTGATCCCACACCTCCACCAACTAGCTGCCACGCTCGCTTTCCCCTGCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGCCAGGCTCGGCTCCTCGATCGACGCCATGTCGCTGCGCCGGCTCTGCTTCGTGCTGCCCATGGACGCCGACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGCCTCGACGACGAGGGATGGCAGCGAGCGGGAGGCTGGCGTCGTACGTCCGCCGCAAGGTCGGCCGCGCGCTGCGGTGCGGGCTCTGCGGCGCCTGGTGCCACCACCGCTCGTCGGGAGTCTGCAGCTTCGAGGACATCGCCGGCGTGGACGCGGTCGGCGCGGGGAAGCTCGGCGGAGGCGCGGGCGGGAGCCCCAGGATCTTCAGCTACTCGGAGCTCTACATCGGGACCAGTGGGTTCAGCGACACGGAGATCCTGGGCAGCGGAGGGTTCGGGCGGGTGTACCGCGCCGTGCTGCCGAGCGACGGCACGACGGTGGCCGTCAAGTGCGTCGCCGGCCGCGGCGACCGGTTCGAGAAGTCCTTCCTGGCGGAGCTGGCGGCGGTGGCGCGGCTGCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCGTTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC GTCGGTTGTCC GATGAGGGGAAGCTGCTCGAC GC CGGCGACC GCAAGCTGCC GGAC GGC AGCTAC CC GCTGTTC GACATGGGCCGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATGAAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTC CGGCGACCTGCCACC GCTTCCGTCCTTCCTAGCTCTCCCA AAGTACGTCTCTCTCACTTCCCCCTCC GATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCAC CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCCCGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATGGTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGCAATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGCCCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGGAACCTCGTCCAGCTGCGCGGCTGGTGCACGGAGCACGGCGAGATGCTCGTCGTCTACGACTACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCCGCCGTCCTCCCGTGGCGCCACCGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTGTACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAAT ] [+] EMBL OSS12095A [ CTAGCTGCCACGCTCGCTTTCCCCTGCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGNCAGGCTCGGCTCCTCGATCGACGCCATGTCGCTGCGACGGCTCTGCTTCGTGCTGCCCATGGACGCCGACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGNCTCGACGACGAGGGATGGCAGCGAGCGNGAGGCTGNCGTCGTACGTCCGCCGCA ] [+] EMBL CB630559 [ GCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGGTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGGGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCGTTCCGCGCGGACGTCGTCATTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATATGCGGAACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCATACGTGTTCAACTTCAGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCTCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC GTCGGTTGTCC GATGAGGGGAAGCTGCTCGAC GC CGGCGACC GCAAGCTGCC GGAC GGC AGCTAC CC GCTGTTC GACATGGGCCGTCTCATACACCTCGGACTCCTCTGCTCGCT ] [+] EMBL CB630557 [ GCGGCACCTCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCGTTCCGCGCGGTCGTCGTCATTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATATGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCAGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC GTCGGTTGTCC GATGAGGGGAAGCTGCTCGAC GC CGGCGACC GCTAGCTGCC GGAC GGC AGCTAC CC GCTGTTC a ] [+] EMBL CB636408 [ GCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCGTTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTTCCCCGACGACCAAATCTTCATGCTGGATTGG ] [+] EMBL BI808901 [ CTTCATGCTGGATTGGTTGCAGTCAGTTGTCCAGATGAGGGGAAGCTGCTCGACAGCACGGCGACCAGCAAGCTGCCAGGACAGGCAAGCTACACCAGCTGTTCAGACATGGGCCGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATGAAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTCACGGCGACCTGCCACCAGCTTCCGTCCTTCCTAGCTCTCCCACAAGTACGTCTCTCTCACTTCCCCCTCCAGATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCACACT TGCGTCGAAGCT TACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGC GCAGCAGCCAGCGATCGAC ] [+] EMBL CB653995 [ CCGTCCTTCCTAGCTCTCCCA AAGTACGTCTCTCTCACTTCCCCCTCC GATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCAC CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCCCGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATGGTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGCAATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGCCCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGGAACCTCGTCCAGCTGCGCGGCTGGTGCCCGGAGCACGGCGAGATGCTCGTCGTCTACGACTACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCCGCCGTCCCTCCGTGGCGCCACCG ] [+] EMBL BI810564 [ CCACGGACAGCACGGTCAC CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCA ] [-] EMBL CB653996 [ CGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTGTACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAAAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATAT AAGGTATTTTCTCTAATAGAGAAA ] [-] EMBL CB630560 [ CCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCGCCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCAGAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGGGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACGGGATATTTTTATATATATTTATTAATTTCGTTC ] [-] EMBL CB630558 [ AGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCGCCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCAGAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGGCACGATATTTTTATATATATTTATTAATTTCGTT ] [-] EMBL CB636409 [ TGGTGGTGCTGAAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAATT ] [+] EMBL C99141 [ GGCCATCGTGGACAAAACGGCTGGACGGCCAGGTTTGATCGCCCGGAGCTCGAGCGGTTGGTAAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGNCCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAATTTCGTTCTTCAAAACCGAAAAAAANAAAAAAAAAAA] consensusID : consensus_13835#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence [TCGGCCTGGTGGTTCTGGAGGTGTTGNACCGGCGAGATGCGGTGGACGTGAGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCCCNCGATGGAAGGACAGACCGCCCCGTCGAGGCCCATCGTGGACAGACGGCTGGACGGCCAGGTTGNTCTGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCGACCCCGTCTTGAGCCCGGCGGCGGCGGTACCGACGATGAGGTAAGATNGTGAGCATCATGGATGGCACATGACGAGATTCTTGATAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACCACAATGCTGCTGCTCTGTCCTTAGTATAGAAGACTCCCANGCTCTTGCGATACCACTGAACCACAACGTCAATATGTATATATTTTNTCTAATAGAGAAATAAATTNTGTTATTATAGTTGGACNCGANATTTTTATATATATTTATTAATTTCGTTTTTCAAAAAAAAAA] [+] EMBL BM419205 [TCGGCCTGGTGGTTCTGGAGGTGTTGNACCGGCGAGATGCGGTGGACGTGAGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCCCNCGATGGAAGGACAGACCGCCCCGTCGAGGCCCATCGTGGACAGACGGCTGGACGGCCAGGTTGNTCTGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCGACCCCGTCTTGAGCCCGGCGGCGGCGGTACCGACGATGAGGTAAGATNGTGAGCATCATGGATGGCACATGACGAGATTCTTGATAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACCACAATGCTGCTGCTCTGTCCTTAGTATAGAAGACTCCCANGCTCTTGCGATACCACTGAACCACAACGTCAATATGTATATATTTTNTCTAATAGAGAAATAAATTNTGTTATTATAGTTGGACNCGANATTTTTATATATATTTATTAATTTCGTTTTTCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13835#0 CCCTCGATTCCCATTTGATCCCACACCTCCACCAACTAGCTGCCACGCTCGCTTTCCCCT 60 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGCCAGGCTC 120 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GGCTCCTCGATCGACGCCATGTCGCTGCGCCGGCTCTGCTTCGTGCTGCCCATGGACGCC 180 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGCCTCGACGACGAGGGATG 240 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCAGCGAGCGGGAGGCTGGCGTCGTACGTCCGCCGCAAGGTCGGCCGCGCGCTGCGGTGC 300 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GGGCTCTGCGGCGCCTGGTGCCACCACCGCTCGTCGGGAGTCTGCAGCTTCGAGGACATC 360 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCCGGCGTGGACGCGGTCGGCGCGGGGAAGCTCGGCGGAGGCGCGGGCGGGAGCCCCAGG 420 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 ATCTTCAGCTACTCGGAGCTCTACATCGGGACCAGTGGGTTCAGCGACACGGAGATCCTG 480 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GGCAGCGGAGGGTTCGGGCGGGTGTACCGCGCCGTGCTGCCGAGCGACGGCACGACGGTG 540 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCCGTCAAGTGCGTCGCCGGCCGCGGCGACCGGTTCGAGAAGTCCTTCCTGGCGGAGCTG 600 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCGGCGGTGGCGCGGCTGCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAG 660 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTC 720 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 CTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGAC 780 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 CGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTC 840 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTAC 900 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 AACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAG 960 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCG 1020 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATC 1080 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTG 1140 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCG 1200 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TACCCCGACGACCAAATCTTCATGCTGGATTGGGTGCGTCGGTTGTCCGATGAGGGGAAG 1260 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 CTGCTCGACGCCGGCGACCGCAAGCTGCCGGACGGCAGCTACCCGCTGTTCGACATGGGC 1320 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 CGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATG 1380 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 AAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTCCGGCGACCTGCCACCGCTTCCGTCC 1440 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TTCCTAGCTCTCCCAAAGTACGTCTCTCTCACTTCCCCCTCCGATTCCGGCACGACGACG 1500 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 AACGCCACGGACAGCACGGTCACCTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACG 1560 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 ACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGC 1620 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCC 1680 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 CGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATG 1740 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGC 1800 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 AATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGC 1860 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 CCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGG 1920 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 AACCTCGTCCAGCTGCGCGGCTGGTGCACGGAGCACGGCGAGATGCTCGTCGTCTACGAC 1980 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCC 2040 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCCGTCCTCCCGTGGCGCCACCGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTG 2100 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTG 2160 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 TTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCA 2220 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 AGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCT 2280 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 GCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACC 2340 consensus_13835#1 ------------------------------------------------------------ consensus_13835#0 ACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGA-CCGGCGAGAT 2399 consensus_13835#1 ----------------------TCGGCCTGGTGGTTCTGGAGGTGTTGNACCGGCGAGAT 38 ***** ******* ********* ** ********** consensus_13835#0 GGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGA 2459 consensus_13835#1 G-CGGTGGACGTGAG-TCGCCGGAGGTCCTTCTTGTCAGGAGAGC-CCNCGATGGAAGGA 95 * ************* ***************************** * ** ******** consensus_13835#0 GCAGAGCCGCCCCGTCGAGGCC-ATCGTGGACAGACGGCTGGACGGCCAGGTTGATC-GC 2517 consensus_13835#1 -CAGA-CCGCCCCGTCGAGGCCCATCGTGGACAGACGGCTGGACGGCCAGGTTGNTCTGC 153 **** **************** ******************************* ** ** consensus_13835#0 CCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGC-ACCCAGTCT--GACCCGGCG 2574 consensus_13835#1 CCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCGACCCCGTCTTGAGCCCGGCG 213 *************************************** **** **** ******* consensus_13835#0 GCG-CG--ACCGACGATGAGG-AAGATAGTGAGCATCATGGATGGCA-ATGACGAGAT-C 2628 consensus_13835#1 GCGGCGGTACCGACGATGAGGTAAGATNGTGAGCATCATGGATGGCACATGACGAGATTC 273 *** ** ************* ***** ******************* ********** * consensus_13835#0 TTGA-AGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAA--AT 2685 consensus_13835#1 TTGATAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACCACAAT 333 **** ************************************************* * ** consensus_13835#0 GCTGCTGCTCTGTCCTTAGTA-AGAAGACTCC-ATGCTCTTGCGATAC-ACTGAAC-ACA 2741 consensus_13835#1 GCTGCTGCTCTGTCCTTAGTATAGAAGACTCCCANGCTCTTGCGATACCACTGAACCACA 393 ********************* ********** * ************* ******* *** consensus_13835#0 ACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACA 2801 consensus_13835#1 ACGTCAATATGTATATATTTTNTCTAATAGAGAAATAAATTNTGTTATTATAGTTGGACN 453 ********************* ******************* ***************** consensus_13835#0 CGATATTTTTATATATATTTATTAATTTCGTTCTTCAAAACCGAAAAAAANAAAAAAAAA 2861 consensus_13835#1 CGANATTTTTATATATATTTATTAATTTCGTTTTTCAAAAAAAAAA-------------- 499 *** **************************** ******* *** consensus_13835#0 AA 2863 consensus_13835#1 -- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||