These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1439 fasta sequence [ACTGACTG-AGGAGT-GAAAAATTCCACGCCTTC------T--TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT-CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACAAGCAAT-GCTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGAGGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCGTTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTGCCCTTTCCTAACAAAGGGGAAATTCCGGGCCCTTAAAATAAATTCCCCCTTAAGGGGAGTGTTTTAAAAATAAAGGGCCCGGGTTTAAAAAACGTGGAAATGGAAAAACCCTGGGGTTACCCAAATTAAATCCCTTGGAAAAAAATCCCCTTTTCCCAAGGGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCCAAAAATTGGCCCACCTTATCCTACGGGAGTTTAAGGGTTAACCCTTAAAA] [+] EMBL CF278237 [ACTGACTG AGGAGT GAAAAATTCCACGCCTTC T TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACAAGCA ] [+] EMBL CF319508 [ CTGAAGGAGTAGAAAAATTCCCCGCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGT CAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTA ] [+] EMBL AK073243 [ TC T TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAGGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACAAGCAAT GCTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGAGGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCGTTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAA ] [+] EMBL CA755335 [ TTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACNAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCANAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGANAGCCATTTCGATCTGCTTCAATTCACATGGNCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCNACCAGCAACCTGACATGAACACCTACNGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACNAGCCATGGCTC ] [-] EMBL CF278238 [ CTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGAGGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCGTTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAATCAAAAAAA ] [+] EMBL CF315661 [ GAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTGCCCTTTCCTAACAAAGGGGAAATTCCGGGCCCTTAAAATAAATTCCCCCTTAAGGGGAGTGTTTTAAAAATAAAGGGCCCGGGTTTAAAAAACGTGGAAATGGAAAAACCCTGGGGTTACCCAAATTAAATCCCTTGGAAAAAAATCCCCTTTTCCCAAGGGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCCAAAAATTGGCCCACCTTATCCTACGGGAGTTTAAGGGTTAACCCTTAAAA] [+] EMBL CF314660 [ GAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] consensusID : consensus_13839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1107 fasta sequence [GACACTGACATGGACTGAGGAGTAGAAAAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGAATTGGCATTTCTCTATCTAGTAGGAAGGAG-TACGTGATACAGAAAAAGGCTAAT-TAGCAGAATCTGTTAAATAATACGGGGTACTAGTATAAAATTAAGGAAAAAAGTGTCAGTAAAAAAAAGAAAAAAAAAAAAACCCTATCATGCCGTTACGTAGC] [+] EMBL CF321308 [GACACTGACATGGACTGAGGAGTAGAAAAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCAT ] [-] EMBL CF317371 [ AAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGCATTGGGTTTTCTCTATCTAGTAGGAAGGAG TACGTGATACAGAAAAAGGCTAATGTAGCAGAATCTGTTAAATAATACGGGGTACTAGTATAAAATTAAGGAAAAAA ] [-] EMBL CF327624 [ AGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCGCGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGAATTGGCATTTCTCTATCTAGTAGGAAGGAG TACGTGATACAGAAAAAGGCTAATGTAGCAGAATCTGTTAAATAAaaa ] [-] EMBL CF321309 [ GCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACTTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAAATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGAAGATGCATATCCATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTCAATTGGCATTTGTCTATTTAGTAGGAAGGAGCTACGTGATACAGAAAAAGGCTAAT TAGCAGAATCTGTTAAATAATACGGGGTAGTAGTATAAAATTAAGGAGGAATGTGTCAGTAAAAAAAAGAAAAAAAAAAAAACCCTATCATGCCGTTACGTAGC] consensusID : consensus_13839#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 598 fasta sequence [CGCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCCAGC-ACCTGACATGAACACCTACAGTCG] [+] EMBL CF336835 [CGCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCCAGC ACCTGACATGAACACCTACAGTCG] [+] EMBL CF327625 [ GCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAA CCAGCAACCTGACATGAACACCTACAG ] consensusID : consensus_13839#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [AGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATTGTCATTTACAAGTTATGCTCCGGTTAAAATGGAGGCGGACGATTATGCGGAAGCAAGTGTTTTGCCCAGTACAACCGGTGTTTTGTTGAGGACATTGCTGCCGATCGGTCAGTCAAAATGCATCGAGTATTTCCATTTTTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTTTGAGGAGCCTTTTGGATGGGGCCAAATAGGGTTTTATATTGGGAGGTGGGGATGTTGGGCTCATGAGATTCCAAAAACTAGGGGCATTAAGTTGTTTTTTTTTTTGCAGGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAAAACTGAATTGGCATTTTTTTATTTAGTAGGAAGGAGTACGGGATCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF319509 [AGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATTGTCATTTACAAGTTATGCTCCGGTTAAAATGGAGGCGGACGATTATGCGGAAGCAAGTGTTTTGCCCAGTACAACCGGTGTTTTGTTGAGGACATTGCTGCCGATCGGTCAGTCAAAATGCATCGAGTATTTCCATTTTTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTTTGAGGAGCCTTTTGGATGGGGCCAAATAGGGTTTTATATTGGGAGGTGGGGATGTTGGGCTCATGAGATTCCAAAAACTAGGGGCATTAAGTTGTTTTTTTTTTTGCAGGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAAAACTGAATTGGCATTTTTTTATTTAGTAGGAAGGAGTACGGGATCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13839#1 GACACTGACATGGACTGAGGAGTAGAAAAAGCGAGACCACTCGGCCCCCACAAAATCCTC 60 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 CGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTT 120 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 GGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGG 180 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGC 240 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 GAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAAT 300 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 GACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTG 360 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 TTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGC 420 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ------------------------------------------------------------ consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGC 480 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 ----------------------------ACTGACTGAGGAGTGAAAAATTCCACGCCTTC 32 consensus_13839#2 ---------------------------------------------CGCCTTCCTTTCTTC 15 consensus_13839#1 AAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATG 540 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 TTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATC-TCCGCT 91 consensus_13839#2 CTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCT 75 consensus_13839#1 CAGCCGTACAGTTCCAACCAGCAACCTGACATGAACA--CCTACAGTCGCCAGTTTC-AT 597 consensus_13839#3 -------------------AGCAACCTGACATGAACA--CCTACAGTCGCCAGTTTC-AT 38 consensus_13839#0 TCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGAT 151 consensus_13839#2 TCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGAT 135 *** * ** * ***** ** * ** ** consensus_13839#1 TGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTAT 657 consensus_13839#3 TGGGCAGACACATTGTCATTTACAAGTTATGCTCCGGTTAAAATGGAGGCGGACGATTAT 98 consensus_13839#0 CCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACAT 211 consensus_13839#2 CCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACAT 195 **** ** * ** * * * * * * ** ** consensus_13839#1 GCGGAAGCAAGTGCTTCGCCCAGTACAAC--CGGTGCTCTGTCGAGGACATTGCTGCCGA 715 consensus_13839#3 GCGGAAGCAAGTGTTTTGCCCAGTACAAC--CGGTGTTTTGTTGAGGACATTGCTGCCGA 156 consensus_13839#0 GGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGA-AGTACGGCGAG 270 consensus_13839#2 GGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGA-AGTACGGCGAG 254 * * * * * ** * **** ** *** ** ***** * * * ** consensus_13839#1 TCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTG---ATGGAAAG 772 consensus_13839#3 TCGGTCAGTCAAAATGCATCGAGTATTTCCATTTTTTGTGATGATTTTG---ATGGAAAG 213 consensus_13839#0 AAGAAACTCTCCAAT---TCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAAT 327 consensus_13839#2 AAGAAACTCTCCAAT---TCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAAT 311 * ** ** * * * * * * * * * * ** consensus_13839#1 TGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTAT- 831 consensus_13839#3 TGAAGGAGATGCATATACATTTTGAGGAGCCTTTTGGATGGGGCCAAATAGGGTTTTAT- 272 consensus_13839#0 GACATGAAGTGCCC-TGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATT 386 consensus_13839#2 GACATGAAGTGCCC-TGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATT 370 * ** *** * * ** * ** ** * ** ** consensus_13839#1 ATTGGGAGGTGGGGATGTTGTGCTC----------ATGAGATTCCATATACTAGTGGCAT 881 consensus_13839#3 ATTGGGAGGTGGGGATGTTGGGCTC----------ATGAGATTCCAAAAACTAGGGGCAT 322 consensus_13839#0 GTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAG 446 consensus_13839#2 GTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAG 430 ** ** * * * * * * ** * * **** consensus_13839#1 TATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATG---ATG 938 consensus_13839#3 TAAGTTGTTTTTTTTTTTGCAGGTAGATTCAAGCCAGATTTTTTTGCTTGAATG---ATG 379 consensus_13839#0 CACTCCTGATTCTACTGTGCA-GTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATG 505 consensus_13839#2 CACTCCTGATTCTACTGTGCA-GTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATG 489 * ** * * **** ** ** ****** * * ***** *** *** consensus_13839#1 TAAAGAAC--TGAATTGGC-ATTTCTCTATC-TAGTAGGAAGGAGTACGTGATACAGAAA 994 consensus_13839#3 TAAAAAAC--TGAATTGGC-ATTTTTTTATT-TAGTAGGAAGGAGTACGGGATCCAGAAA 435 consensus_13839#0 GCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCA 565 consensus_13839#2 GCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCA 549 * * * **** * * * * * * * * * * * consensus_13839#1 AAGGCTAATTAGCAGAATCTGTTAAATAATACGGGGTACTAGTATAAAATTAAGGAAAAA 1054 consensus_13839#3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 472 consensus_13839#0 TGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGT 625 consensus_13839#2 TGCAGCCGTACAGTTCCAACCCAGCACCTGACATGAACACCTACAGTCG----------- 598 * * consensus_13839#1 AGTGTCAGTAAAAAAAAGAAAAAAAAAAAAACCCTATCATGCCGTTACGTAGC------- 1107 consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 GGGCAGACACATCGTCATCTACAAGCAATGCTCCGGTTAAGATGGAGGCGGACGATTATG 685 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 CAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCG 745 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 GTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGG 805 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 AGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGA 865 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 GGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTC 925 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 TTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCG 985 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 TTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTG 1045 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 TTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAAAAAAAAAAAAAAAAAA 1105 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1165 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 AAAAAAAAAAAAAACCCTTGTTTGCCCTTTCCTAACAAAGGGGAAATTCCGGGCCCTTAA 1225 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 AATAAATTCCCCCTTAAGGGGAGTGTTTTAAAAATAAAGGGCCCGGGTTTAAAAAACGTG 1285 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 GAAATGGAAAAACCCTGGGGTTACCCAAATTAAATCCCTTGGAAAAAAATCCCCTTTTCC 1345 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ------------------------------------------------------------ consensus_13839#3 ------------------------------------------------------------ consensus_13839#0 CAAGGGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCCAAAAATTGGCCCACCT 1405 consensus_13839#2 ------------------------------------------------------------ consensus_13839#1 ---------------------------------- consensus_13839#3 ---------------------------------- consensus_13839#0 TATCCTACGGGAGTTTAAGGGTTAACCCTTAAAA 1439 consensus_13839#2 ---------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||