These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13843#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2049 fasta sequence [CCCCCGGGGCGGCAGGATCCAAGCAAGCTAGCACAGCCGCCACCAACAATTTCATCGCGAATCGCAAGAGCGAGGAGACGAGAATACGGCCACGAATCTGCATCCGCTTGCCCGCCCCATTCCCCCGTCCAAATCCAAGCAGCCGGCGGCGGGTGCGGTTCGGTGAATCGAATCGTGGGCAAATTGTTTTGTTCCATTCCGCTGCTGCGTCCTGCTCCGATTCAGTTCGTGCGCTGTCGATAAAACCGATGCTTCGCCCCGCGAACCCTAGCTCGGGGTGCTGCGGCGGCGGCGGCGGCGGCCTGTAGACTGTAGTGGTGGCTGTGGGACGCGAGGGTCGCTCGCCATGCCGTGGCTGGAGATGTGGCTGCCCCCCGCGGGCTCGGGGGGAGGAGGAGAGGGGATGGCGGCGGGGCTGTTCCTCGACGGCGAGGCGGCGCACGGCGCGCTCCTCGCGGCGATGCCCGGCATCTCCGCGTCGTTCGGCGTGCGGCAGCGGCGGCCGGGGTTCGTGTCGCTGACGATGTCGGTGAAAGGGGGCAGGGGGTTCGTGAGTGGCCCGGTGGGGCTGCTCGCGAGCGGGGAGGAGAAGGGCGCCCGGGCGGAGGAGGCGGAGGCGCTGGTCGCGGGGAGGAGGGCGACGGAGGAGGAGGTGGCGGAGGCGTCGGAGGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC-TGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCTGCTGGTGTTACA-GCAACGATATTGTGTATACCAATGGATACGATTAGGACAAGGATGGT-AGCTCCTGGTGGTGAAGCCTTAGGAGGAGTTATT-GGTGTTGCCCGCCACATGATCCAGACTG-AAGGGTTCTTCTCTCTGTACAAA-GGATTGGTACCTTCACTCATCAGCATGGCACCCTCT-GGTGCTGTATTCTAT-GGAGTATATGACATATTGAAGATGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC-TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCAG-CCACATACCCATTTGAAGTAG-TTAGGAGACAGCTA-CAGATGCAAGTC-AAAGCAACAAGGAT-GAATGCTTTTGC-AACATGCCTTAAAATTGTTGAT-CAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTTGCTACTTGCTACAACCTACAAAGTGGCATGTTGATAACCTTTTGCAAGCATGGCAAAAAAAAAAAAGG] [+] EMBL AK070661 [CCCCCGGGGCGGCAGGATCCAAGCAAGCTAGCACAGCCGCCACCAACAATTTCATCGCGAATCGCAAGAGCGAGGAGACGAGAATACGGCCACGAATCTGCATCCGCTTGCCCGCCCCATTCCCCCGTCCAAATCCAAGCAGCCGGCGGCGGGTGCGGTTCGGTGAATCGAATCGTGGGCAAATTGTTTTGTTCCATTCCGCTGCTGCGTCCTGCTCCGATTCAGTTCGTGCGCTGTCGATAAAACCGATGCTTCGCCCCGCGAACCCTAGCTCGGGGTGCTGCGGCGGCGGCGGCGGCGGCCTGTAGACTGTAGTGGTGGCTGTGGGACGCGAGGGTCGCTCGCCATGCCGTGGCTGGAGATGTGGCTGCCCCCCGCGGGCTCGGGGGGAGGAGGAGAGGGGATGGCGGCGGGGCTGTTCCTCGACGGCGAGGCGGCGCACGGCGCGCTCCTCGCGGCGATGCCCGGCATCTCCGCGTCGTTCGGCGTGCGGCAGCGGCGGCCGGGGTTCGTGTCGCTGACGATGTCGGTGAAAGGGGGCAGGGGGTTCGTGAGTGGCCCGGTGGGGCTGCTCGCGAGCGGGGAGGAGAAGGGCGCCCGGGCGGAGGAGGCGGAGGCGCTGGTCGCGGGGAGGAGGGCGACGGAGGAGGAGGTGGCGGAGGCGTCGGAGGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGTCAACTCCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCTGCTGGTGTTACA GCAACGATATTGTGTATACCAATGGATACGATTAGGACAAGGATGGT AGCTCCTGGTGGTGAAGCCTTAGGAGGAGTTATT GGTGTTGCCCGCCACATGATCCAGACTG AAGGGTTCTTCTCTCTGTACAAA GGATTGGTACCTTCACTCATCAGCATGGCACCCTCT GGTGCTGTATTCTAT GGAGTATATGACATATTGAAGATGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCAG CCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTC AAAGCAACAAGGAT GAATGCTTTTGC AACATGCCTTAAAATTGTTGAT CAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAGGGAAAGTGGGTTTGCTACTTGCTACAACCTACAAAGTGGCATGTTGAT ] [+] EMBL AK103991 [ GCTTGCCCGCCCCATTCCCCCGTCCAAATCCAAGCAGCCGGCGGCGGGTGCGGTTCGGTGAATCGAATCGTGGGCAAATTGTTTTGTTCCATTCCGCTGCTGCGTCCTGCTCCGATTCAGTTCGTGCGCTGTCGATAAAACCGATGCTTCGCCCCGCGAACCCTAGCTCGGGGTGCTGCGGCGGCGGCGGCGGCGGCCTGTAGACTGTAGTGGTGGCTGTGGGACGCGAGGGTCGCTCGCCATGCCGTGGCTGGAGATGTGGCTGCCCCCCGCGGGCTCGGGGGGAGGAGGAGAGGGGATGGCGGCGGGGCTGTTCCTCGACGGCGAGGCGGCGCACGGCGCGCTCCTCGCGGCGATGCCCGGCATCTCCGCGTCGTTCGGCGTGCGGCAGCGGCGGCCGGGGTTCGTGTCGCTGACGATGTCGGTGAAAGGGGGCAGGGGGTTCGTGAGTGGCCCGGTGGGGCTGCTCGCGAGCGGGGAGGAGAAGGGCGCCCGGGCGGAGGAGGCGGAGGCGCTGGTCGCGGGGAGGAGGGCGACGGAGGAGGAGGTGGCGGAGGCGTCGGAGGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGTCAACTTCTATGCATATGGCACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCTGCTGGTGTTACA GCAACGATATTGTGTATACCAATGGATACGATTAGGACAAGGATGGT AGCTCCTGGTGGTGAAGCCTTAGGAGGAGTTATT GGTGTTGCCCGCCACATGATCCAGACTG AAGGGTTCTTCTCTCTGTACAAA GGATTGGTACCTTCACTCATCAGCATGGCACCCTCT GGTGCTGTATTCTAT GGAGTATATGACATATTGAAGATGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCAG CCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTC AAAGCAACAAGGAT GAATGCTTTTGC AACATGCCTTAAAATTGTTGAT CAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTTGCTACTTGCTACAACCTGCAAAG ] [+] EMBL AK066434 [ GCGGCGGCGGCGGCGGCGGCCTGTAGACTGTAGTGGTGGCTGTGGGACGCGAGGGTCGCTCGCCATGCCGTGGCTGGAGATGTGGCTGCCCCCCGCGGGCTCGGGGGGAGGAGGAGAGGGGATGGCGGCGGGGCTGTTCCTCGACGGCGAGGCGGCGCACGGCGCGCTCCTCGCGGCGATGCCCGGCATCTCCGCGTCGTTCGGCGTGCGGCAGCGGCGGCCGGGGTTCGTGTCGCTGACGATGTCGGTGAAAGGGGGCAGGGGGTTCGTGAGTGGCCCGGTGGGGCTGCTCGCGAGCGGGGAGGAGAAGGGCGCCCGGGCGGAGGAGGCGGAGGCGCTGGTCGCGGGGAGGAGGGCGACGGAGGAGGAGGTGGCGGAGGCGTCGGAGGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCTGCTGGTGTTACA GCAACGATATTGTGTATACCAATGGATACGATTAGGACAAGGATGGT AGCTCCTGGTGGTGAAGCCTTAGGAGGAGTTATT GGTGTTGCCCGCCACATGATCCAGACTG AAGGGTTCTTCTCTCTGTACAAA GGATTGGTACCTTCACTCATCAGCATGGCACCCTCT GGTGCTGTATTCTAT GGAGTATATGACATATTGAAGATGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCAG CCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTC AAAGCAACAAGGAT GAATGCTTTTGC AACATGCCTTAAAATTGTTGAT CAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTT ] [+] EMBL CB661445 [ AGTGGTGGCTGTGGGACGCGAGGGTCGCTCGCCATGCCGTGGCTGGAGATGTGGCTGCCCCCCGCGGGCTCGGGGGGAGGAGGAGAGGGGATGGCGGCGGGGCTGTTCCTCGACGGCGAGGCGGCGCACGGCGCGCTCCTCGCGGCGATGCCCGGCATCTCCGCGTCGTTCGGCGTGCGGCAGCGGCGGCCGGGGTTCGTGTCGCTGACGATGTCGGTGAAAGGGGGCAGGGGGTTCGTGAGTGGCCCGGTGGGGCTGCTCGCGAGCGGGGAGGAGAAGGGCGCCCGGGCGGAGGAGGCGGAGGCGCTGGTCGCGGGGAGGATGGCGACGGAGGAGGAGGTGGCGGAGGCGTCGGAGGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGCCTGGAGCCGATGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCCTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGACAACTTCTATGCAT ] [+] EMBL AU063936 [ GGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTACTTGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAAC AACTTTGAAAGGTTTATCGCTGGTGCTGCGGCTGGTG TACA GGAACGATATTGTGTA ACCAATGGATcc ] [+] EMBL AU063949 [ GGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCNGCTGGTGTTACACNGACCGATATTGTGTATACCAATGGATA ] [+] EMBL CB620925 [ AAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAAAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCTGCTGGTGTTACA GCAACGATATTGTGTATACCAATGGATACGATTAGGACAAGGATGGT AGCTCCTGGTGGTGAAGCCTTAGGAGGAGTTATT GGTGTTGCCCGCCACATGATCCAGACTG AAGGGTTCTTCTCTCTGTACAAA GGATTGGTACCTTCACTCATCAGCATGGCACCCTCT GGTGCTGTATTCTAT GGAGTATATGACATATTGAAGATGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCCA CCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTCAAAAGC ACAAGGA ] [+] EMBL CF324048 [ AAGGAGGCTCGTGCTGGTGCGGGCGCCATGAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGTTGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATTTGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTTCGTCAACATTCTCCGTAC TGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTACAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTATCGCTGGTGCTGCTGCTGGTGTTACA GCAACGATATTGTGTATACCAATGGATACGATTAGGACAAGGATGGTNAGCT CTGGTGGTGAAGCCTTAGGAGGAGTTTTTGGGTGTTGCCCGCCACATGATCCAGACTGNAAGGGTTCTTCTCTCTGTACAAAGGGATTGGTACCTTCACTCATCAGCATGGCACCCTCTGGGTGCTGTATTCTATGGGAGTATATG ] [-] EMBL CB661446 [ TTGGTACCTTCACTCATCAGCATGGCACCCTCT GGTGCTGTATTCTAT GGAGTATATGACATATTGAAGATGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCAG CCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTC AAAGCAACAAGGAT GAATGCTTTTGC AACATGCCTTAAAATTGTTGAT CAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTTGCT ] [-] EMBL CB620926 [ TGGGCTACCTGCATTCCCCCGAAGGGAAGAGGAGGGTATCATCGATGAAACAACAAGGTCAAGAGGCAAATGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACC TTACTATATGGTGCTATTGCTGGTTGCTGTGCTGAAGCAG CCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTC AAAGCAACAAGGAT GAATGCTTTTGC AACATCCCTTAAAATTGTTGAT CAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCCCATCAAGTTCAAGAAGCCCAGCTCCCATTCCCTTGACAAAATGCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCCCAAGATTACCTTATACACGATGAGGTCTTGTTCGCCATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTTGCTACTTGCTCCAACCTACAAAGTGGCATGTTGATTCCCTTTTGCAAGCATGGCAAAAAAAAAAAAGG] [+] EMBL AU085881 [ AGATCAGCTTGAGTTGGNCNCAGTTAGGACCTTTACTATATGGTGCTATTGCTGGTCGCTGTGCTGAAGCAGCCCACATACCCATTTGAAGTAG TTAGGAGACAGCTA CAGATGCAAGTC AAAGCAACAAGGAT GAATGCTTTTGC AACATGCCTTAAAATTGTTGATCCAAGGTGGAGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTTGCTACTTGCTACAACCTACAAAGTGGCATGTTAAAAA ] [+] EMBL AU094076 [ AAGCAGCCCACATNCCCATTTGAAGTAGTTTAGGAGACAGCTACCAGATGCAAGTC AAAGCAACAAGGATGGAATGCTTTTGCAAACATGCCTTAAAATTGTTGAT CAAGGTGGAGTACCAGCACTCTATGCTGGCTTNATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTCTATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGTTCGCTCGAAGCTTTTCACCACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGTTTGCTACTTGCTACAACCTACAAAGTGGCATGTTAAAAA ] [-] EMBL D43434 [ CTTTTCACCACAAGATTNCCTTATACACGATGAGGTCTTGTNCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATAGGAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTT ] consensusID : consensus_13843#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 611 fasta sequence [TGGNCCNNNAAAAATTTGGTTGGAATCCNANGGGGGGGGAAGTNACCCNCCNCCCCNCATNGCNTGGGGGGTGGAAACCCCCNNCCCTGGGCTTGCTACAGGTTCTGCCACACTNTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGGTCCGCTCNAANCTTTTCCCACNAGATTACCTTATACACNATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATANCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCCACTGGAAAGGAAAGTGGGTTTGCTACTTGCTACNACCTACAAAGTGGCATGTTGATTCCCTTTTGCAAGCATGGCNTCNGGTGGGTTGAAAAAAAAAAAAAA] [+] EMBL BE228421 [TGGNCCNNNAAAAATTTGGTTGGAATCCNANGGGGGGGGAAGTNACCCNCCNCCCCNCATNGCNTGGGGGGTGGAAACCCCCNNCCCTGGGCTTGCTACAGGTTCTGCCACACTNTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAATTAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATTCAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGCCGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGGTCCGCTCNAANCTTTTCCCACNAGATTACCTTATACACNATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTGTTGCAGATTGATCTGTCATANCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTAACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCCACTGGAAAGGAAAGTGGGTTTGCTACTTGCTACNACCTACAAAGTGGCATGTTGATTCCCTTTTGCAAGCATGGCNTCNGGTGGGTTGAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13843#0 CCCCCGGGGCGGCAGGATCCAAGCAAGCTAGCACAGCCGCCACCAACAATTTCATCGCGA 60 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 ATCGCAAGAGCGAGGAGACGAGAATACGGCCACGAATCTGCATCCGCTTGCCCGCCCCAT 120 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 TCCCCCGTCCAAATCCAAGCAGCCGGCGGCGGGTGCGGTTCGGTGAATCGAATCGTGGGC 180 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 AAATTGTTTTGTTCCATTCCGCTGCTGCGTCCTGCTCCGATTCAGTTCGTGCGCTGTCGA 240 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 TAAAACCGATGCTTCGCCCCGCGAACCCTAGCTCGGGGTGCTGCGGCGGCGGCGGCGGCG 300 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GCCTGTAGACTGTAGTGGTGGCTGTGGGACGCGAGGGTCGCTCGCCATGCCGTGGCTGGA 360 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GATGTGGCTGCCCCCCGCGGGCTCGGGGGGAGGAGGAGAGGGGATGGCGGCGGGGCTGTT 420 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CCTCGACGGCGAGGCGGCGCACGGCGCGCTCCTCGCGGCGATGCCCGGCATCTCCGCGTC 480 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GTTCGGCGTGCGGCAGCGGCGGCCGGGGTTCGTGTCGCTGACGATGTCGGTGAAAGGGGG 540 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CAGGGGGTTCGTGAGTGGCCCGGTGGGGCTGCTCGCGAGCGGGGAGGAGAAGGGCGCCCG 600 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GGCGGAGGAGGCGGAGGCGCTGGTCGCGGGGAGGAGGGCGACGGAGGAGGAGGTGGCGGA 660 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GGCGTCGGAGGGGAAGGTGGTCGAGGAGGTGAAGGAGGCTCGTGCTGGTGCGGGCGCCAT 720 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GAACATGACGAAACATTTATGGTCTGGAGCCGTTGCTGCTATGGTATCTAGAACAGTTGT 780 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 TGCTCCCCTCGAGAGGCTAAAGTTGGAGTACATAGTTCGTGCTGAGCAGAGAAATCTATT 840 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 TGAGCTTATCCATGCCATTGCAACAACACAGGGTTTGAAAGGCTTTTGGAAAGGAAACTT 900 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CGTCAACATTCTCCGTACTGCTCCATTCAAAGCCGTCAACTTCTATGCATATGACACTTA 960 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CAGAAAGCAGTTGCTCAAATGGTCTGGCAATGATGAAACAACAAACTTTGAAAGGTTTAT 1020 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CGCTGGTGCTGCTGCTGGTGTTACAGCAACGATATTGTGTATACCAATGGATACGATTAG 1080 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GACAAGGATGGTAGCTCCTGGTGGTGAAGCCTTAGGAGGAGTTATTGGTGTTGCCCGCCA 1140 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CATGATCCAGACTGAAGGGTTCTTCTCTCTGTACAAAGGATTGGTACCTTCACTCATCAG 1200 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 CATGGCACCCTCTGGTGCTGTATTCTATGGAGTATATGACATATTGAAGATGGGCTACCT 1260 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 GCATTCCCCCGAAGGGAAGAGGAGGGTATCAACGATGAAACAACAAGGTCAAGAGGCAAA 1320 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 TGCATTAGATCAGCTTGAGTTGGGCACAGTTAGGACCTTACTATATGGTGCTATTGCTGG 1380 consensus_13843#1 ------------------------------------------------------------ consensus_13843#0 TTGCTGTGCTGAAGCAGCCACATACCCATTTGAAGTAGTTAGGAGACAGCTACAGATGCA 1440 consensus_13843#1 ------------------------------------------TGGNCCNNNAAAAATTTG 18 * * * * ** consensus_13843#0 AGTCAAAGCAACAAGGATGAATGCTTTTGCAACATGCCTTAAAATTGTTGATCAAGGTGG 1500 consensus_13843#1 GTTGGAATCCNANGGGGGGGGAAGTNACCCNCCNCCCCNCATNGC--NTGG--GGGGTGG 74 * ** * ** * * * * ** * ** ***** consensus_13843#0 AGTACCAGCACTCTATGCTGGCTTGATCCCCAGCTTGCTACAGGTTCTGCCATCAGCGTC 1560 consensus_13843#1 A-----AACCCCCNNCCCTGG-----------GCTTGCTACAGGTTCTGCCACA------ 112 * * * * * **** ******************** consensus_13843#0 TATCAGTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAAT 1620 consensus_13843#1 ---CTNTTATTTCGTATATGAGTTAATGAAGATAGTCCTGAAAGTGGAATGAATGCAAAT 169 * ****************************************************** consensus_13843#0 TAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATT 1680 consensus_13843#1 TAATTCTTGAGCATGCACATCAAGTTCAAGAAGCCCAGCTCACATTACCTTGACAAAATT 229 ************************************************************ consensus_13843#0 CAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGC 1740 consensus_13843#1 CAAGTAAACAGCGCATTTAGATCTGTTTTTGTAGCATTTCTTCACGGAAGCTTCAAAGGC 289 ************************************************************ consensus_13843#0 CGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTG-TTCGCTCGAAGCTTTTCAC 1799 consensus_13843#1 CGTGGGAGTAACTTTATCTTGGCCAAAGCCTGAAGCATTGGTCCGCTCNAANCTTTTC-C 348 **************************************** * ***** ** ****** * consensus_13843#0 CACAAGATTACCTTATACACGATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTG 1859 consensus_13843#1 CACNAGATTACCTTATACACNATGAGGTCTTGTTCGACATCTGATTCGATCACCGATCTG 408 *** **************** *************************************** consensus_13843#0 TTGCAGATTGATCTGTCATAGCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTA 1919 consensus_13843#1 TTGCAGATTGATCTGTCATANCAAAAACATATGGGCTTCTTGCCCTTCAGATTTCAATTA 468 ******************** *************************************** consensus_13843#0 ACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCGACTGGAAAGGAAAGTGGGT 1979 consensus_13843#1 ACAAATTTTCAACTTTTCATTTTTGATGTATTGATGCATCCACTGGAAAGGAAAGTGGGT 528 **************************************** ******************* consensus_13843#0 TTGCTACTTGCTACAACCTACAAAGTGGCATGTTGATAACCTTTTGCAAGCATGGCA--- 2036 consensus_13843#1 TTGCTACTTGCTACNACCTACAAAGTGGCATGTTGATTCCCTTTTGCAAGCATGGCNTCN 588 ************** ********************** ***************** consensus_13843#0 ---------AAAAAAAAAAAGG- 2049 consensus_13843#1 GGTGGGTTGAAAAAAAAAAAAAA 611 *********** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||