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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1386 cluster # 1386       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1386#0 length = 877 sequences # 2  

consensusID : consensus_1386#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 877
fasta sequence
                              [AAAAGAGATGGAGACTAGAACTGGACCAACTGCCGCCGGCGGCCATGGCGCCCACCTCGCCGGCGCCGGCCGCGGCGCCCTCCTCCTCGCGCTCGTCGTCGTCTCTGCCGCCGCCTTCCTCCCCGTAGCCGAATCGTCCTGCCCGCGAGACAATTCGCTTGTGAAAGATGTTAGCAAAATGTACCAAAGCAACTATGGAAGGGAAGGGTTCTCACATATAACCATTGCTGGTGCCCTAGCTCATGGAATGAAGGAGGTGGAAGTGTGGCTTCAGACATTTGG-ACCAGGGCAAAGGACGCCGA-TCCACAGGCACTCGTGCGAGGAAGTTTTTGTC-GTCTTGAAAGGGAAAGGGACACTCTTG-CTGGGGTCAAGCTCAATGAAGTATCCAGGGCAGCCT-CAGGAGATTCC-CGTCTTTC-AGAATAGCACATTCT-CTGTTCCTGTAAATGATCCGCACCAGGT-TTGGAATTCTGATGAACATGAGGATTTG-CAGGTGCTTGTGATCATTTCGCGCCCACCTGT-CAAGATATTT--ACATATGACGATTGGAGTGTGCCT-CATACAGCAGCAAAACTGAAGTTCCCCTACTTCTGGGATGAGGACTGCTTACCAGCACCGAAGGATGAACTCTAGTTTCT-AAACCGGCTATTGCAGTGTATCAT-CTTCATTCAAGATACTGCTGGATTGCGGTCGATACT-TGC-TGTAACTCT-TTTCCCTTCTCTCTAATGTGCAGTTCT-AAAAT-GTGTTCTCTTGCTTAATGTCAGGACTTATGTACTTAGAGCTTTTGCAGTAAGGACCACTGTAAGTGTAAACTAGTTACATAATAACGCTTCACTAATCCAGACATTATCTGTGTATATAAATAAATGCCTACACAGCTGG]

[+] EMBL AK111608             [AAAAGAGATGGAGACTAGAACTGGACCAACTGCCGCCGGCGGCCATGGCGCCCACCTCGCCGGCGCCGGCCGCGGCGCCCTCCTCCTCGCGCTCGTCGTCGTCTCTGCCGCCGCCTTCCTCCCCGTAGCCGAATCGTCCTGCCCGCGAGACAATTCGCTTGTGAAAGATGTTAGCAAAATGTACCAAAGCAACTATGGAAGGGAAGGGTTCTCACATATAACCATTGCTGGTGCCCTAGCTCATGGAATGAAGGAGGTGGAAGTGTGGCTTCAGACATTTGG ACCAGGGCAAAGGACGCCGA TCCACAGGCACTCGTGCGAGGAAGTTTTTGTC GTCTTGAAAGGGAAAGGGACACTCTTG CTGGGGTCAAGCTCAATGAAGTATCCAGGGCAGCCT CAGGAGATTCC CGTCTTTC AGAATAGCACATTCT CTGTTCCTGTAAATGATCCGCACCAGGT TTGGAATTCTGATGAACATGAGGATTTG CAGGTGCTTGTGATCATTTCGCGCCCACCTGT CAAGATATTT  ACATATGACGATTGGAGTGTGCCT CATACAGCAGCAAAACTGAAGTTCCCCTACTTCTGGGATGAGGACTGCTTACCAGCACCGAAGGATGAACTCTAGTTTCT AAACCGGCTATTGCAGTGTATCAT CTTCATTCAAGATACTGCTGGATTGCGGTCGATACT TGC TGTAACTCT TTTCCCTTCTCTCTAATGTGCAGTTCT AAAAT GTGTTCTCTTGCTTAATGTCAGGACTTATGTACTTAGAGCTTTTGCAGTAAGGACCACTGTAAGTGTAAACTAGTTACATAATAACGCTTCACTAATCCAGACATTATCTGTGTATATAAATAAATGCCTACACAGCTGG]
[+] EMBL BI807043             [                                                                                                                                                                                                                                                        TGAA GAAGTTGAA TGTGGCTTCAGACAGTTGGAACCAGGGC AAGGACGCCGATTCCACAGCCACTCGTGCGAGGAATTTTTTGTCAGTCTTGAAAGNGAAAGGGACACTCTTGACTGGGGTCAAGCTCAATGAAGTATCCA GGCANCCTGCAGGAGATTCCTTGTCTTGCAAGAATAGCACATTCTGCTGTTCCTGTAAATGATCCGCACCAGGTGTTGGAATTCTGATGAACATGAGGATTTGACAGGTGCTTGTGATCATTTCGCGCCCACCTGTGCAAGATATGTGGACATATGACGATTGGAGTGTGCCTGCATACAGCAGC AAACTGAAGTTCCCCTACTTCTGGGATGAGGACTGCTTACCAGCACCGAAGGATGAACTCTAGTTTCTGAAACCGGCTATTGCAGTGTATCATGCTTCATTCAAGATACTGCTGGATTGCGGTCGATACTGTCCNCGTAACTCTGTTTCCCTTCTCTCTAATGTGCAGTTCTGAAAATGGTGTTCTCTTGCTTAATGTTAGGACTTATGTACTTAGAGCTTTT CAGTAAGGACCACTATAAGTGTAAACTACTTACATAATAACGTTTCACTAATCCAGACATTATCTGTGTATATAAA                   ]


>consensus_1386#0 AAAAGAGATGGAGACTAGAACTGGACCAACTGCCGCCGGCGGCCATGGCGCCCACCTCGC CGGCGCCGGCCGCGGCGCCCTCCTCCTCGCGCTCGTCGTCGTCTCTGCCGCCGCCTTCCT CCCCGTAGCCGAATCGTCCTGCCCGCGAGACAATTCGCTTGTGAAAGATGTTAGCAAAAT GTACCAAAGCAACTATGGAAGGGAAGGGTTCTCACATATAACCATTGCTGGTGCCCTAGC TCATGGAATGAAGGAGGTGGAAGTGTGGCTTCAGACATTTGGACCAGGGCAAAGGACGCC GATCCACAGGCACTCGTGCGAGGAAGTTTTTGTCGTCTTGAAAGGGAAAGGGACACTCTT GCTGGGGTCAAGCTCAATGAAGTATCCAGGGCAGCCTCAGGAGATTCCCGTCTTTCAGAA TAGCACATTCTCTGTTCCTGTAAATGATCCGCACCAGGTTTGGAATTCTGATGAACATGA GGATTTGCAGGTGCTTGTGATCATTTCGCGCCCACCTGTCAAGATATTTACATATGACGA TTGGAGTGTGCCTCATACAGCAGCAAAACTGAAGTTCCCCTACTTCTGGGATGAGGACTG CTTACCAGCACCGAAGGATGAACTCTAGTTTCTAAACCGGCTATTGCAGTGTATCATCTT CATTCAAGATACTGCTGGATTGCGGTCGATACTTGCTGTAACTCTTTTCCCTTCTCTCTA ATGTGCAGTTCTAAAATGTGTTCTCTTGCTTAATGTCAGGACTTATGTACTTAGAGCTTT TGCAGTAAGGACCACTGTAAGTGTAAACTAGTTACATAATAACGCTTCACTAATCCAGAC ATTATCTGTGTATATAAATAAATGCCTACACAGCTGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)