These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1386#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 877 fasta sequence [AAAAGAGATGGAGACTAGAACTGGACCAACTGCCGCCGGCGGCCATGGCGCCCACCTCGCCGGCGCCGGCCGCGGCGCCCTCCTCCTCGCGCTCGTCGTCGTCTCTGCCGCCGCCTTCCTCCCCGTAGCCGAATCGTCCTGCCCGCGAGACAATTCGCTTGTGAAAGATGTTAGCAAAATGTACCAAAGCAACTATGGAAGGGAAGGGTTCTCACATATAACCATTGCTGGTGCCCTAGCTCATGGAATGAAGGAGGTGGAAGTGTGGCTTCAGACATTTGG-ACCAGGGCAAAGGACGCCGA-TCCACAGGCACTCGTGCGAGGAAGTTTTTGTC-GTCTTGAAAGGGAAAGGGACACTCTTG-CTGGGGTCAAGCTCAATGAAGTATCCAGGGCAGCCT-CAGGAGATTCC-CGTCTTTC-AGAATAGCACATTCT-CTGTTCCTGTAAATGATCCGCACCAGGT-TTGGAATTCTGATGAACATGAGGATTTG-CAGGTGCTTGTGATCATTTCGCGCCCACCTGT-CAAGATATTT--ACATATGACGATTGGAGTGTGCCT-CATACAGCAGCAAAACTGAAGTTCCCCTACTTCTGGGATGAGGACTGCTTACCAGCACCGAAGGATGAACTCTAGTTTCT-AAACCGGCTATTGCAGTGTATCAT-CTTCATTCAAGATACTGCTGGATTGCGGTCGATACT-TGC-TGTAACTCT-TTTCCCTTCTCTCTAATGTGCAGTTCT-AAAAT-GTGTTCTCTTGCTTAATGTCAGGACTTATGTACTTAGAGCTTTTGCAGTAAGGACCACTGTAAGTGTAAACTAGTTACATAATAACGCTTCACTAATCCAGACATTATCTGTGTATATAAATAAATGCCTACACAGCTGG] [+] EMBL AK111608 [AAAAGAGATGGAGACTAGAACTGGACCAACTGCCGCCGGCGGCCATGGCGCCCACCTCGCCGGCGCCGGCCGCGGCGCCCTCCTCCTCGCGCTCGTCGTCGTCTCTGCCGCCGCCTTCCTCCCCGTAGCCGAATCGTCCTGCCCGCGAGACAATTCGCTTGTGAAAGATGTTAGCAAAATGTACCAAAGCAACTATGGAAGGGAAGGGTTCTCACATATAACCATTGCTGGTGCCCTAGCTCATGGAATGAAGGAGGTGGAAGTGTGGCTTCAGACATTTGG ACCAGGGCAAAGGACGCCGA TCCACAGGCACTCGTGCGAGGAAGTTTTTGTC GTCTTGAAAGGGAAAGGGACACTCTTG CTGGGGTCAAGCTCAATGAAGTATCCAGGGCAGCCT CAGGAGATTCC CGTCTTTC AGAATAGCACATTCT CTGTTCCTGTAAATGATCCGCACCAGGT TTGGAATTCTGATGAACATGAGGATTTG CAGGTGCTTGTGATCATTTCGCGCCCACCTGT CAAGATATTT ACATATGACGATTGGAGTGTGCCT CATACAGCAGCAAAACTGAAGTTCCCCTACTTCTGGGATGAGGACTGCTTACCAGCACCGAAGGATGAACTCTAGTTTCT AAACCGGCTATTGCAGTGTATCAT CTTCATTCAAGATACTGCTGGATTGCGGTCGATACT TGC TGTAACTCT TTTCCCTTCTCTCTAATGTGCAGTTCT AAAAT GTGTTCTCTTGCTTAATGTCAGGACTTATGTACTTAGAGCTTTTGCAGTAAGGACCACTGTAAGTGTAAACTAGTTACATAATAACGCTTCACTAATCCAGACATTATCTGTGTATATAAATAAATGCCTACACAGCTGG] [+] EMBL BI807043 [ TGAA GAAGTTGAA TGTGGCTTCAGACAGTTGGAACCAGGGC AAGGACGCCGATTCCACAGCCACTCGTGCGAGGAATTTTTTGTCAGTCTTGAAAGNGAAAGGGACACTCTTGACTGGGGTCAAGCTCAATGAAGTATCCA GGCANCCTGCAGGAGATTCCTTGTCTTGCAAGAATAGCACATTCTGCTGTTCCTGTAAATGATCCGCACCAGGTGTTGGAATTCTGATGAACATGAGGATTTGACAGGTGCTTGTGATCATTTCGCGCCCACCTGTGCAAGATATGTGGACATATGACGATTGGAGTGTGCCTGCATACAGCAGC AAACTGAAGTTCCCCTACTTCTGGGATGAGGACTGCTTACCAGCACCGAAGGATGAACTCTAGTTTCTGAAACCGGCTATTGCAGTGTATCATGCTTCATTCAAGATACTGCTGGATTGCGGTCGATACTGTCCNCGTAACTCTGTTTCCCTTCTCTCTAATGTGCAGTTCTGAAAATGGTGTTCTCTTGCTTAATGTTAGGACTTATGTACTTAGAGCTTTT CAGTAAGGACCACTATAAGTGTAAACTACTTACATAATAACGTTTCACTAATCCAGACATTATCTGTGTATATAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||