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Oryza sativa
cluster # 13867 cluster # 13867       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13867#0 length = 1940 sequences # 2  
consensus_13867#1 length = 1040 sequences # 10  
consensus_13867#2 length = 675 sequences # 1  
consensus_13867#3 length = 514 sequences # 1  

consensusID : consensus_13867#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1940
fasta sequence
                              [GAGTAGAAAACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTCGTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAGCAAAAAATTGAATGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCATTATGAGTGAAAAAAATGTTCTTTGTTCTCTCGCATCGAGGATATCTGCAAATTGGAGCAGGAACAATTTGGGCTTGCTTGGATCATTGTCAATCCATGCCTTACCAAAATATTGGCATGCTAAATTTTTTTTGGTGGAGTATGATTGGTTGGTTTGTTGCCAAGTTGTTTGAGCTCATGGTTCTCTTGCCATTTTTTTTTTGATCCCCAGAGGCCCAGTTCAAATGCACGTCTAGCTTCTCCAGCTACTAATCTTCTGCATGGCAAGTTTAGAGGCAGTAATCCAAAAACAAGCCCTTTATCTCGTCGTACAATGGGCAATGCAACAATATTCATTTCTCTAGGTCAATATGGCTAACCAAAGGACATGCTGCTCTGGCTTTTTATCTGCCATCCTCATGTTTGTTGGTATTCCAGGCAGACTGGTGAAGAGTAAATAGGTTTGCTCAGCTCAGATGACTCCAAATTCACATCCCAAAAATAAGGAACACCTTCCTGTCTTTCTCCCTCTAAAGTTGAGGTCATCAATGTTTTCTCCTATTAATAGACGCTAAGCTGATTACCTGCACTTCTCCCTAGCAGGGAGGAAGGAATGGCAGAACCATTGGAGAATTGGATCTTTGGCTCATCGTTGGGGGGTTTCAAATATCGGTTCAATAGATGAATTTAATAGATTCTAAGGCAAATAGTAAACCATATACTAATCAGAGCCTTTGAGAAAGATGGCAGAAACTGAAGATACTCAGTTACAAAAAGCAATATTCGCACAGTACATTATGATGAAGAAGTTATTCATGGAGTTGGAAGAGGAGAGAGAAGCTTCAGCAACTTCTGCAAGTGCAGCCTTGTCAATGATTCGAAAGCTTCAGAAGGAGAAGGAGGAGCAGAGGATGGAAGCATGGCAGTACAAGAGGATAGCTGAGGAAAAGATTAGCCACAGTGACAAAGCACTGGAGATTCTACAGGAAGTCCTTCAACAGAAGGAACTGGAGAATTTTTATCTGAGAAACCAATTGCTGGTGTATA]

[+] EMBL CF318009             [GAGTAGAAAACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTCGTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAGCAAAAAATTGAATGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK071719             [           TGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTCGTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAGCAAAAAATTGAATGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCATTATGAGTGAAAAAAATGTTCTTTGTTCTCTCGCATCGAGGATATCTGCAAATTGGAGCAGGAACAATTTGGGCTTGCTTGGATCATTGTCAATCCATGCCTTACCAAAATATTGGCATGCTAAATTTTTTTTGGTGGAGTATGATTGGTTGGTTTGTTGCCAAGTTGTTTGAGCTCATGGTTCTCTTGCCATTTTTTTTTTGATCCCCAGAGGCCCAGTTCAAATGCACGTCTAGCTTCTCCAGCTACTAATCTTCTGCATGGCAAGTTTAGAGGCAGTAATCCAAAAACAAGCCCTTTATCTCGTCGTACAATGGGCAATGCAACAATATTCATTTCTCTAGGTCAATATGGCTAACCAAAGGACATGCTGCTCTGGCTTTTTATCTGCCATCCTCATGTTTGTTGGTATTCCAGGCAGACTGGTGAAGAGTAAATAGGTTTGCTCAGCTCAGATGACTCCAAATTCACATCCCAAAAATAAGGAACACCTTCCTGTCTTTCTCCCTCTAAAGTTGAGGTCATCAATGTTTTCTCCTATTAATAGACGCTAAGCTGATTACCTGCACTTCTCCCTAGCAGGGAGGAAGGAATGGCAGAACCATTGGAGAATTGGATCTTTGGCTCATCGTTGGGGGGTTTCAAATATCGGTTCAATAGATGAATTTAATAGATTCTAAGGCAAATAGTAAACCATATACTAATCAGAGCCTTTGAGAAAGATGGCAGAAACTGAAGATACTCAGTTACAAAAAGCAATATTCGCACAGTACATTATGATGAAGAAGTTATTCATGGAGTTGGAAGAGGAGAGAGAAGCTTCAGCAACTTCTGCAAGTGCAGCCTTGTCAATGATTCGAAAGCTTCAGAAGGAGAAGGAGGAGCAGAGGATGGAAGCATGGCAGTACAAGAGGATAGCTGAGGAAAAGATTAGCCACAGTGACAAAGCACTGGAGATTCTACAGGAAGTCCTTCAACAGAAGGAACTGGAGAATTTTTATCTGAGAAACCAATTGCTGGTGTATA]


>consensus_13867#0 GAGTAGAAAACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTC GTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGC CTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATC CGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGAT GCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCA GGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGT CTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCT TCTGAGGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAG TCCCCGCGCAAGCCTGCAGCAAAAAATTGAATGGTTTATGACACTGACTGCAATGGGAAG GTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAG CAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCA AATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTT GAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGCTTAATTAAC TTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCA TTTTTTCCTAACATCTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTT TCTAGTACCTTCCATTATGAGTGAAAAAAATGTTCTTTGTTCTCTCGCATCGAGGATATC TGCAAATTGGAGCAGGAACAATTTGGGCTTGCTTGGATCATTGTCAATCCATGCCTTACC AAAATATTGGCATGCTAAATTTTTTTTGGTGGAGTATGATTGGTTGGTTTGTTGCCAAGT TGTTTGAGCTCATGGTTCTCTTGCCATTTTTTTTTTGATCCCCAGAGGCCCAGTTCAAAT GCACGTCTAGCTTCTCCAGCTACTAATCTTCTGCATGGCAAGTTTAGAGGCAGTAATCCA AAAACAAGCCCTTTATCTCGTCGTACAATGGGCAATGCAACAATATTCATTTCTCTAGGT CAATATGGCTAACCAAAGGACATGCTGCTCTGGCTTTTTATCTGCCATCCTCATGTTTGT TGGTATTCCAGGCAGACTGGTGAAGAGTAAATAGGTTTGCTCAGCTCAGATGACTCCAAA TTCACATCCCAAAAATAAGGAACACCTTCCTGTCTTTCTCCCTCTAAAGTTGAGGTCATC AATGTTTTCTCCTATTAATAGACGCTAAGCTGATTACCTGCACTTCTCCCTAGCAGGGAG GAAGGAATGGCAGAACCATTGGAGAATTGGATCTTTGGCTCATCGTTGGGGGGTTTCAAA TATCGGTTCAATAGATGAATTTAATAGATTCTAAGGCAAATAGTAAACCATATACTAATC AGAGCCTTTGAGAAAGATGGCAGAAACTGAAGATACTCAGTTACAAAAAGCAATATTCGC ACAGTACATTATGATGAAGAAGTTATTCATGGAGTTGGAAGAGGAGAGAGAAGCTTCAGC AACTTCTGCAAGTGCAGCCTTGTCAATGATTCGAAAGCTTCAGAAGGAGAAGGAGGAGCA GAGGATGGAAGCATGGCAGTACAAGAGGATAGCTGAGGAAAAGATTAGCCACAGTGACAA AGCACTGGAGATTCTACAGGAAGTCCTTCAACAGAAGGAACTGGAGAATTTTTATCTGAG AAACCAATTGCTGGTGTATA



consensusID : consensus_13867#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1040
fasta sequence
                              [CCACACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTCGTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTT-TAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAG-CAAAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC--T----TTT--TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT-CTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK059843             [CCACACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTCGTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTT TAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAG CAAAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  T    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGA                                                      ]
[+] EMBL CA756489             [                                GCCTCCGCCTCTCCCTTCCTCTCGTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTT TAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAG CANAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK102411             [                                                                                        TCCGGATTCGAGGGGACCAAGCATCGCCTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGAGGATGCTCGATGGGCTGAACTT TAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAG CAAAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  T    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCC                    ]
[+] EMBL BI799197             [                                                                                                                                                                                                                                                                                                                                                                                                                    TCTCAGAGGCTTCTGAGGATGCTAGATGGCCTGAACTTCCAAGGAGTTCGTGGCGTTCTAATCGGCGTTTAGTCCCCGCGCAAGCCTGCAGCCTAAAAATTGAATTTATTTTCAGGGTTTATGACACCGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGACTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACCAAAGATTCAAAATTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCAATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTACTTT    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTAaaaa                                             ]
[+] EMBL BI804298             [                                                                                                                                                                                                                                                                                                                                                                                                                       CAGA GCTTCTGAGGATGCTAGAT GGCTGAACTT CAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCAG C AAAAATTGAATTTATTTTCAGGGTTTATGACACCGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGACTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACCAAAGATTCAAAATTTACTCTGCCAGACTTTATGAAGATTCTTGAC ATTCTGATGTGAAGATGGAGGTTGAAGTTCCAATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  TTCTCTTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTAaaaa                                             ]
[+] EMBL BI802981             [                                                                                                                                                                                                                                                                                                                                                                                                                                CTGAGGATGCTAGATGGGCTGAACTT CAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCCGCGCAAGCCTGCA  C AAAAATTGAATTTATTTTCAGGGTTTATGACACCGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGACTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACCAAAGATTCAAAATTTACTCTGCCAGACTTTATGAAGATTCTTGAC ATTCTGATGTGAAGATGGAGGTTGAAGTTCCCATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  T    TTTCCCCTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCCCCCTCATATTGAACACGTCTGTGATATTAaaaa                                             ]
[+] EMBL CB000355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCAG CAAAAAATTGAATTTATTTTCAGGGTTCATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  T    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB000170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCAG CAAAAAATTGAATTTATTTTCAGGGTTTCTGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  T    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB000675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCAG CAAAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTAC  T    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCAAAANAAAAAAAAAAAAAAA]
[-] EMBL CF337469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                attgaatGGTTTATGACACTGACTGCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGACTGAGCAGCAGAGGCAAAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAGATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGGAGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTACT T    TTT  TTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCAaaaaa                                                                                                                                             ]


>consensus_13867#1 CCACACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTCGTCGG CGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGCCTGCA GAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATCCGAAT TTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGATGCTGA CGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCAGGAGA TCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGTCTCCG CCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCTTCTGA GGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAGTCCCC GCGCAAGCCTGCAGCAAAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTGCAATG GGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGTCTGGTTCTTTTATGA CTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACAAAAG ATTCAAATTTTACTCTGCCAGACTTTATGAAGATTCTTGACAATTCTGATGTGAAGATGG AGGTTGAAGTTCCTATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGT CAGCTTGAGAAGATGGATTAATTAGACCCTACTAGTACTTTTTTTATCATGTATTAAGCT GTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGT GCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACA TCTTTTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCC AAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13867#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence
                              [TGCCCCCCGGTTCCCGGTTCGCCGATGGGGCGCGATTCTTCTCCCCGGGAATTCTCTGCCTCCCGGTTTCCCTGGACCCTTTCTCTCAAAAACTTTTTAAGAATCTTAAAATGCCTGAACTTCCAAGAATTTCTGCCTTCTTATCGGCGTTTAGTCCCCGCGCAACCTGCACAAAAAATTGAATTTATTTTCAGGGTTTATGACACCGACTCCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGACTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACCAAAGATTCAAATTTACTCTGCCAGACTTTATGAAGATTCTTGACATTCTGATGTGAAGATGGAGGTTGAAGTTCCATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCCTTGAGAAGATGGATTAATTAGACCCTACTAGTACTTTTTCTCTTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTCTTCATATTGAAAACGTCTGTGATATTAAAAA]

[+] EMBL BI803303             [TGCCCCCCGGTTCCCGGTTCGCCGATGGGGCGCGATTCTTCTCCCCGGGAATTCTCTGCCTCCCGGTTTCCCTGGACCCTTTCTCTCAAAAACTTTTTAAGAATCTTAAAATGCCTGAACTTCCAAGAATTTCTGCCTTCTTATCGGCGTTTAGTCCCCGCGCAACCTGCACAAAAAATTGAATTTATTTTCAGGGTTTATGACACCGACTCCAATGGGAAGGTGGCATTTGATGATATCTTGAGCATCTTGCGGGATCTGACTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTTTTGATCCATGTTTTAGAAGAAGCTGGCTATACCAAAGATTCAAATTTACTCTGCCAGACTTTATGAAGATTCTTGACATTCTGATGTGAAGATGGAGGTTGAAGTTCCATTGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCCTTGAGAAGATGGATTAATTAGACCCTACTAGTACTTTTTCTCTTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTATTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTCTTCATATTGAAAACGTCTGTGATATTAAAAA]


>consensus_13867#2 TGCCCCCCGGTTCCCGGTTCGCCGATGGGGCGCGATTCTTCTCCCCGGGAATTCTCTGCC TCCCGGTTTCCCTGGACCCTTTCTCTCAAAAACTTTTTAAGAATCTTAAAATGCCTGAAC TTCCAAGAATTTCTGCCTTCTTATCGGCGTTTAGTCCCCGCGCAACCTGCACAAAAAATT GAATTTATTTTCAGGGTTTATGACACCGACTCCAATGGGAAGGTGGCATTTGATGATATC TTGAGCATCTTGCGGGATCTGACTGGTTCTTTTATGACTGAGCAGCAGAGGCAGAAAGTT TTGATCCATGTTTTAGAAGAAGCTGGCTATACCAAAGATTCAAATTTACTCTGCCAGACT TTATGAAGATTCTTGACATTCTGATGTGAAGATGGAGGTTGAAGTTCCATTGACTAAGTA CTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCCTTGAGAAGATGGATTAATTAG ACCCTACTAGTACTTTTTCTCTTTATCATGTATTAAGCTGTAATTAGTGAAACATCTGTA TTTGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGT ACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTCTTCATATTGAAAACGT CTGTGATATTAAAAA



consensusID : consensus_13867#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence
                              [TTTTCAGGTTTATGACCCCGACTGCAATGGGAAGGTGCCACTTTGATGATATCTTGAGCATCTTCGCGGGATCTGACTGGTTCTTTTATGACTGGACACGCAGAGGCAGAAAGTCTTTGGATCCATGGTTTTAGAAGAAGCTGGGCTATACCAAAGATTCCAAAATGTTGACTCTGGCCAGACTTTATGGAAGATTCTGTGGACAATTGCTGGATGGTGGAAGATGGGAGGTTGAAGTGTGCCAATTGGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGGATTAATTAGACCCTACTAGTACTTTTTTTGTGTATCATGTATTAAGCTGGTAATTAGTGAAACATCTGGTATTTGGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTTTCATATTGAAAACGTCTGTGATATTAAAAA]

[+] EMBL BI803232             [TTTTCAGGTTTATGACCCCGACTGCAATGGGAAGGTGCCACTTTGATGATATCTTGAGCATCTTCGCGGGATCTGACTGGTTCTTTTATGACTGGACACGCAGAGGCAGAAAGTCTTTGGATCCATGGTTTTAGAAGAAGCTGGGCTATACCAAAGATTCCAAAATGTTGACTCTGGCCAGACTTTATGGAAGATTCTGTGGACAATTGCTGGATGGTGGAAGATGGGAGGTTGAAGTGTGCCAATTGGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAGAAGATGGGATTAATTAGACCCTACTAGTACTTTTTTTGTGTATCATGTATTAAGCTGGTAATTAGTGAAACATCTGGTATTTGGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTTTCATATTGAAAACGTCTGTGATATTAAAAA]


>consensus_13867#3 TTTTCAGGTTTATGACCCCGACTGCAATGGGAAGGTGCCACTTTGATGATATCTTGAGCA TCTTCGCGGGATCTGACTGGTTCTTTTATGACTGGACACGCAGAGGCAGAAAGTCTTTGG ATCCATGGTTTTAGAAGAAGCTGGGCTATACCAAAGATTCCAAAATGTTGACTCTGGCCA GACTTTATGGAAGATTCTGTGGACAATTGCTGGATGGTGGAAGATGGGAGGTTGAAGTGT GCCAATTGGACTAAGTACTTGTGTCATTGTTCTGTGCCCCGGCATGTATGTCAGCTTGAG AAGATGGGATTAATTAGACCCTACTAGTACTTTTTTTGTGTATCATGTATTAAGCTGGTA ATTAGTGAAACATCTGGTATTTGGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTG CATCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACAT CTTTTCATATTGAAAACGTCTGTGATATTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      -----CCACACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTC 55
consensus_13867#0      GAGTAGAAAACTGCCCCACACATCCATCGCCGGATTCGCCTCCGCCTCTCCCTTCCTCTC 60
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      GTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGC 115
consensus_13867#0      GTCGGCGGCAGCAAGCGGCGGCGGCGGCGGAGCTCCGGATTCGAGGGGACCAAGCATCGC 120
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      CTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATC 175
consensus_13867#0      CTGCAGAGGAATCCGCCTGAAGGATTGGACTTCGATTCCGGGAGGATCCCCGCCCGGATC 180
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      CGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGAT 235
consensus_13867#0      CGAATTTTGGCCGACCGGGATCCCCGTCTCCTCCGCCGAGATGGGGAGCACCTCGTCGAT 240
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      GCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCA 295
consensus_13867#0      GCTGACGCAGTACGACATCGAGGAGGTCCAGGACCACTGCGACCACGCCTTCTCGCAGCA 300
                                                                                   

consensus_13867#2      ---------------------TGCCCCCCGGTTCCCGGTTCGCCGATGGGGCGCGATTCT 39
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      GGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGT 355
consensus_13867#0      GGAGATCGTGTCGCTGTACCACCGGTTCTGCCAGCTCGACCGGAATGGGGGCGGATTCGT 360
                                                                                   

consensus_13867#2      TCTCCCCGGGAATTCTCTG-----CCTCCCGGTTTCCCTGGACCCTTTCTCTCAAAAACT 94
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      CTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCT 415
consensus_13867#0      CTCCGCCGAGGAATTCATGACCGTCCCCGAGTTCGCCGTGAACCCTCTCTCTCAGAGGCT 420
                                                                                   

consensus_13867#2      TTTTAAGAATCTTAAAATGCCTGAACTTCCAAGAATTTCTGCCTTCTTATCGGCGTTTAG 154
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      TCTGAGGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAG 475
consensus_13867#0      TCTGAGGATGCTCGATGGGCTGAACTTTAAGGAGTTCGTGGCGTTCTTATCGGCGTTTAG 480
                                                                                   

consensus_13867#2      TCCCCGCGCAA-CCTGCA-CAAAAAATTGAATTTATTTTCAGGGTTTATGACACCGACTC 212
consensus_13867#3      -----------------------------------TTTTCAGG-TTTATGACCCCGACTG 24
consensus_13867#1      TCCCCGCGCAAGCCTGCAGCAAAAAATTGAATTTATTTTCAGGGTTTATGACACTGACTG 535
consensus_13867#0      TCCCCGCGCAAGCCTGCAGCAAAAAA----------TTGAATGGTTTATGACACTGACTG 530
                                                           **  * * ******** * **** 

consensus_13867#2      CAATGGGAAGGTGGCA-TTTGATGATATCTTGAGCATCTT-GCGGGATCTGACTGGTTCT 270
consensus_13867#3      CAATGGGAAGGTGCCACTTTGATGATATCTTGAGCATCTTCGCGGGATCTGACTGGTTCT 84
consensus_13867#1      CAATGGGAAGGTGGCA-TTTGATGATATCTTGAGCATCTT-GCGGGATCTGTCTGGTTCT 593
consensus_13867#0      CAATGGGAAGGTGGCA-TTTGATGATATCTTGAGCATCTT-GCGGGATCTGTCTGGTTCT 588
                       ************* ** *********************** ********** ********

consensus_13867#2      TTTATGACTGAGCA-GCAGAGGCAGAAAGTTTT--GATCCATG-TTTTAGAAGAAGCTGG 326
consensus_13867#3      TTTATGACTGGACACGCAGAGGCAGAAAGTCTTTGGATCCATGGTTTTAGAAGAAGCTGG 144
consensus_13867#1      TTTATGACTGAGCA-GCAGAGGCAGAAAGTTTT--GATCCATG-TTTTAGAAGAAGCTGG 649
consensus_13867#0      TTTATGACTGAGCA-GCAGAGGCAGAAAGTTTT--GATCCATG-TTTTAGAAGAAGCTGG 644
                       **********  ** *************** **  ******** ****************

consensus_13867#2      -CTATACCAAAGATTCAAA----TTTACTCTG-CCAGACTTTATG-AAGATTCT--TGAC 377
consensus_13867#3      GCTATACCAAAGATTCCAAAATGTTGACTCTGGCCAGACTTTATGGAAGATTCTGTGGAC 204
consensus_13867#1      -CTATACAAAAGATTCAAAT---TTTACTCTG-CCAGACTTTATG-AAGATTCT--TGAC 701
consensus_13867#0      -CTATACAAAAGATTCAAAT---TTTACTCTG-CCAGACTTTATG-AAGATTCT--TGAC 696
                        ****** ******** **    ** ****** ************ ********   ***

consensus_13867#2      ATTC------TGATGTGAAGATGGAGGTTGAAGT---TCCATTG-ACTAAGTACTTGTGT 427
consensus_13867#3      AATTGCTGGATGGTGGAAGATGGGAGGTTGAAGTGTGCCAATTGGACTAAGTACTTGTGT 264
consensus_13867#1      AATTC-----TGATGTGAAGATGGAGGTTGAAGT--TCCTATTG-ACTAAGTACTTGTGT 753
consensus_13867#0      AATTC-----TGATGTGAAGATGGAGGTTGAAGT--TCCTATTG-ACTAAGTACTTGTGT 748
                       * *       ** **  *    ************    * **** ***************

consensus_13867#2      CATTGTTCTGTGCCCCGGCATGTATG-TCAGCCTTGAGAAGATGG-ATTAATTAGACCCT 485
consensus_13867#3      CATTGTTCTGTGCCCCGGCATGTATG-TCAGC-TTGAGAAGATGGGATTAATTAGACCCT 322
consensus_13867#1      CATTGTTCTGTGCCCCGGCATGTATG-TCAGC-TTGAGAAGATGG-ATTAATTAGACCCT 810
consensus_13867#0      CATTGTTCTGTGCCCCGGCATGCTTAATTAACTTTTACCACCCGTGCATCCTATGACCTT 808
                       **********************  *  * * * ** *  *   *    *  *  **** *

consensus_13867#2      ACTAGTACTTTTTCTCTTTA---------TCATGTATTA-----AGCTG-TAATTAGTGA 530
consensus_13867#3      ACTAGTACTTTTTTTGTGTA---------TCATGTATTA-----AGCTGGTAATTAGTGA 368
consensus_13867#1      ACTAGTACTTTTTTT----A---------TCATGTATTA-----AGCTG-TAATTAGTGA 851
consensus_13867#0      TCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAACATCTTTTCATATTGAA 868
                        *  ***** **       *         **** * **      * **  * **     *

consensus_13867#2      AACATCTG---TATT-TG-ATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCA--- 582
consensus_13867#3      AACATCTGG--TATT-TGGATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCA--- 422
consensus_13867#1      AACATCTG---TATT-TG-ATCATTTTCAGGCTTAATTAACTTTTACCACCCGTGCA--- 903
consensus_13867#0      AACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTTCCATTATGAGTGAAAAA 928
                       *** ****   **** **  * ***       *  * ** ***  *  *   *** *   

consensus_13867#2      ----TCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAAC 638
consensus_13867#3      ----TCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAAC 478
consensus_13867#1      ----TCCTATGACCTTTCAGGTACTGTTACCCTGTAAGGTCCCCTTCATTTTTTCCTAAC 959
consensus_13867#0      AATGTTCTTTGTTCTCTCGCATCGAGGATATCTGCAAATTGGAGCAGGAACAATTTGGGC 988
                           * ** **  ** **   *   *     *** **  *             *     *

consensus_13867#2      ATCTTCTTCATATTGAAAACGTCTGTGATATTAAAAA----------------------- 675
consensus_13867#3      ATCTT-TTCATATTGAAAACGTCTGTGATATTAAAAA----------------------- 514
consensus_13867#1      ATCTT-TTCATATTGAAAACGTCTGTGATATTATGGCTTATTAATCCTTTCTAGTACCTT 1018
consensus_13867#0      TTGCTTGGATCATTGTCAATCCATGCCTTACCAAAATATTGGCATGCTAAATTTTTTTTG 1048
                        *  *      ****  **    **   **  *                           

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      CCAAAAAAAAAAAAAAAAAAAA-------------------------------------- 1040
consensus_13867#0      GTGGAGTATGATTGGTTGGTTTGTTGCCAAGTTGTTTGAGCTCATGGTTCTCTTGCCATT 1108
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      TTTTTTTTGATCCCCAGAGGCCCAGTTCAAATGCACGTCTAGCTTCTCCAGCTACTAATC 1168
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      TTCTGCATGGCAAGTTTAGAGGCAGTAATCCAAAAACAAGCCCTTTATCTCGTCGTACAA 1228
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      TGGGCAATGCAACAATATTCATTTCTCTAGGTCAATATGGCTAACCAAAGGACATGCTGC 1288
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      TCTGGCTTTTTATCTGCCATCCTCATGTTTGTTGGTATTCCAGGCAGACTGGTGAAGAGT 1348
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      AAATAGGTTTGCTCAGCTCAGATGACTCCAAATTCACATCCCAAAAATAAGGAACACCTT 1408
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      CCTGTCTTTCTCCCTCTAAAGTTGAGGTCATCAATGTTTTCTCCTATTAATAGACGCTAA 1468
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      GCTGATTACCTGCACTTCTCCCTAGCAGGGAGGAAGGAATGGCAGAACCATTGGAGAATT 1528
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      GGATCTTTGGCTCATCGTTGGGGGGTTTCAAATATCGGTTCAATAGATGAATTTAATAGA 1588
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      TTCTAAGGCAAATAGTAAACCATATACTAATCAGAGCCTTTGAGAAAGATGGCAGAAACT 1648
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      GAAGATACTCAGTTACAAAAAGCAATATTCGCACAGTACATTATGATGAAGAAGTTATTC 1708
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      ATGGAGTTGGAAGAGGAGAGAGAAGCTTCAGCAACTTCTGCAAGTGCAGCCTTGTCAATG 1768
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      ATTCGAAAGCTTCAGAAGGAGAAGGAGGAGCAGAGGATGGAAGCATGGCAGTACAAGAGG 1828
                                                                                   

consensus_13867#2      ------------------------------------------------------------
consensus_13867#3      ------------------------------------------------------------
consensus_13867#1      ------------------------------------------------------------
consensus_13867#0      ATAGCTGAGGAAAAGATTAGCCACAGTGACAAAGCACTGGAGATTCTACAGGAAGTCCTT 1888
                                                                                   

consensus_13867#2      ----------------------------------------------------
consensus_13867#3      ----------------------------------------------------
consensus_13867#1      ----------------------------------------------------
consensus_13867#0      CAACAGAAGGAACTGGAGAATTTTTATCTGAGAAACCAATTGCTGGTGTATA 1940
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)