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Oryza sativa
cluster # 13888 cluster # 13888       Sequences # 14       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13888#0 length = 1050 sequences # 3  
consensus_13888#1 length = 994 sequences # 2  
consensus_13888#2 length = 929 sequences # 4  
consensus_13888#3 length = 718 sequences # 1  
consensus_13888#4 length = 635 sequences # 2  
consensus_13888#5 length = 328 sequences # 1  
consensus_13888#6 length = 316 sequences # 1  

consensusID : consensus_13888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1050
fasta sequence
                              [GCAGCAACGTACGCGTACTGTCTAGTTAGCTAGCTTCTTAGCTTCGAACCTTCGATCTCTCGATCACAGGCTAATCAAGCTTAGCTTGATGGCAACTTGGTCCAATGCGTCGTCTCTGATCGTCGCCGCCGTAATTCTGCTTGGCCTCAGCTCGGCAAGCGTCGCGCATGGCCGCCGCGGCAGGAGGAGCTTCGTCTCCAGCTACGACGAGCCGTGCATGGAGATGAGGCTGTACCTCCACGACATCATCTACGACTACAGTAACAGCACCTCCAACTCCACGTCGGCGGCGGCCACCAAGCCGACGCCGCTGAGCACCGCCGTGTCCAACCCCGGCTACTTCTTCGGCGAGATGGTGGTGTTCAACGACCCCATGACGGAGGGGAGGGCGCTGCCGCCGTCGCCGGCGATGGAGGAGGAGACGGCAGTGCGCGCGCAGGGGGTCTACCTCTACGACAAGAAGGAGGCGCCCAACGCGTGGTTCGCCTTCTCCGTGGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTGATGGGCGCCGACCTCATGTCGGAGAAGACGAGGGACCTCTCCGTCGTGGGTGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACGCTCAGCACCGACGAGGCCTCGGCGGACTTGTCATACTTCCGGGTGAAGGTGGACATCAAGCTCTACGAATGCTACGTCTGATCCCATGCATACGTACGCTTGCTCTTTCATGGCCGTGGATCGGATCATCGCGTGTCCTAAATATGCGCTTGTATTTGTGTGATTGTGTGTGTTGAATTTCCTTCTTGACATTCATCATCTTTGCGTGACGAGTCATATGCACGGAGAAATGTGCAAAATGTGTTTTTTTTTTCGTGTTTTGGATTTGCATCTCATGTATTGTTTGAGTGACGAGTCAGCGATCGGCTTGGCGTGGTGGTTTGTTTTGTCTTTCTTTTTCCTGGTTATAATCTTCATAGTTATAATCTTATAATTTTTTTTCTACATCAATATAAAATCTTGTATTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK108983             [GCAGCAACGTACGCGTACTGTCTAGTTAGCTAGCTTCTTAGCTTCGAACCTTCGATCTCTCGATCACAGGCTAATCAAGCTTAGCTTGATGGCAACTTGGTCCAATGCGTCGTCTCTGATCGTCGCCGCCGTAATTCTGCTTGGCCTCAGCTCGGCAAGCGTCGCGCATGGCCGCCGCGGCAGGAGGAGCTTCGTCTCCAGCTACGACGAGCCGTGCATGGAGATGAGGCTGTACCTCCACGACATCATCTACGACTACAGTAACAGCACCTCCAACTCCACGTCGGCGGCGGCCACCAAGCCGACGCCGCTGAGCACCGCCGTGTCCAACCCCGGCTACTTCTTCGGCGAGATGGTGGTGTTCAACGACCCCATGACGGAGGGGAGGGCGCTGCCGCCGTCGCCGGCGATGGAGGAGGAGACGGCAGTGCGCGCGCAGGGGGTCTACCTCTACGACAAGAAGGAGGCGCCCAACGCGTGGTTCGCCTTCTCCGTGGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTGATGGGCGCCGACCTCATGTCGGAGAAGACGAGGGACCTCTCCGTCGTGGGTGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACGCTCAGCACCGACGAGGCCTCGGCGGACTTGTCATACTTCCGGGTGAAGGTGGACATCAAGCTCTACGAATGCTACGTCTGATCCCATGCATACGTACGCTTGCTCTTTCATGGCCGTGGATCGGATCATCGCGTGTCCTAAATATGCGCTTGTATTTGTGTGATTGTGTGTGTTGAATTTCCTTCTTGACATTCATCATCTTTGCGTGACGAGTCATATGCACGGAGAAATGTGCAAAATGTGTTTTTTTTTTCGTGTTTTGGATTTGCATCTCATGTATTGTTTGAGTGACGAGTCAGCGATCGGCTTGGCGTGGTGGTTTGTTTTGTCTTTCTTTTTCCTGGTTATAATCTTCATAGTTATAATCTTATAATTTTTTTTCTACATCAATATAAA                             ]
[+] EMBL CF290880             [GCAGCAACGTACGCGTACTGTCTAGTTAGCTAGCTTCTTAGCTTCGAACCTTCGATCTCTCGATCACAGGCTAATCAAGCTTAGCTTGATGGCAACTTGGTCCAATGCGTCGTCTCTGATCGTCGCCGCCGTAATTCTGCTTGGCCTCAGCTCGGCAAGCGTCGCGCATGGCCGCCGCGGCAGGAGGAGCTTCGTCTCCAGCTACGACGAGCCGTGCATGGAGATGAGGCTGTACCTCCACGACATCATCTACGACTACAGTAACAGCACCTCCAACTCCACGTCGGCGGCGGCCACCAAGCCGACGCCGCTGAGCACCGCCGTGTCCAACCCCGGCTACTTCTTCGGCGAGATGGTGGTGTTCAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF290879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGTCATACTTCCGGGTGAAGGTGGACATCAAGCTTTACGAATGGTACGTTTGATCCCATGCATACGTACGCTTGCTTTTTCATGGCCGTGGATCGGATCATCGCGTGTCCTAAATATGCGCTTGTATTTGTGTGATTGTGTGTGTTGAATTTCCTTCTTGACATTCATCATCTTTGCGTGACGAGTCATATGCCCGGAGAAATGTGCAAAATGTGTTTTTTTTTTCGTGTTTTGGATTTGCATCTCATGTATTGTTTGAGTGACGAGTCAGCGATCGGCTTGGCGTGGTGGTTTGTTTTGTCTTTCTTTTTCCTGGTTATAATCTTCATAGTTATAATCTTATAATTTTTTTTCTACATCAATATAAAATCTTGTATTAAAAAAAAAAAAAAAAAAA]


>consensus_13888#0 GCAGCAACGTACGCGTACTGTCTAGTTAGCTAGCTTCTTAGCTTCGAACCTTCGATCTCT CGATCACAGGCTAATCAAGCTTAGCTTGATGGCAACTTGGTCCAATGCGTCGTCTCTGAT CGTCGCCGCCGTAATTCTGCTTGGCCTCAGCTCGGCAAGCGTCGCGCATGGCCGCCGCGG CAGGAGGAGCTTCGTCTCCAGCTACGACGAGCCGTGCATGGAGATGAGGCTGTACCTCCA CGACATCATCTACGACTACAGTAACAGCACCTCCAACTCCACGTCGGCGGCGGCCACCAA GCCGACGCCGCTGAGCACCGCCGTGTCCAACCCCGGCTACTTCTTCGGCGAGATGGTGGT GTTCAACGACCCCATGACGGAGGGGAGGGCGCTGCCGCCGTCGCCGGCGATGGAGGAGGA GACGGCAGTGCGCGCGCAGGGGGTCTACCTCTACGACAAGAAGGAGGCGCCCAACGCGTG GTTCGCCTTCTCCGTGGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTGATGGG CGCCGACCTCATGTCGGAGAAGACGAGGGACCTCTCCGTCGTGGGTGGCACCGGCGACTT CTTCATGTCCCGCGGCGTCGCCACGCTCAGCACCGACGAGGCCTCGGCGGACTTGTCATA CTTCCGGGTGAAGGTGGACATCAAGCTCTACGAATGCTACGTCTGATCCCATGCATACGT ACGCTTGCTCTTTCATGGCCGTGGATCGGATCATCGCGTGTCCTAAATATGCGCTTGTAT TTGTGTGATTGTGTGTGTTGAATTTCCTTCTTGACATTCATCATCTTTGCGTGACGAGTC ATATGCACGGAGAAATGTGCAAAATGTGTTTTTTTTTTCGTGTTTTGGATTTGCATCTCA TGTATTGTTTGAGTGACGAGTCAGCGATCGGCTTGGCGTGGTGGTTTGTTTTGTCTTTCT TTTTCCTGGTTATAATCTTCATAGTTATAATCTTATAATTTTTTTTCTACATCAATATAA AATCTTGTATTAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13888#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 994
fasta sequence
                              [CTGCAGCTAGCTAGCTAAGCTTGGATAACAGTGCAAGGGCGCCGGACGGCTACTTGGTCCATGGCGTCTCTGACGATCGTCGTCGCCACCATCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCGCCGTCCATGGCCGGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTGTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAACTCCACGGCGGCGGCGGCCACCAAGCCGACGGCGCTGGCCAACGCCGTGCCGTCGACCGGCGGCACCTTCTTCGGCGAGGTGGTGGTGTTCAACGACCCGGTGACGGAGGGGAGGGCGCTGCCGCCGTCGCTGGAGGAGACGGCGGTGAGGGCGCAGGGGCTCTACCTCTACAACAGCAAGGAGGCGTTCAACGCGTGGCTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGTCGCGCGGCGTCGCCACCCTCCGCACCGACGCTTTCGAGGGCTTCACCTACTTCAGGCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTATGATGCATCCATCCATGGTCGTATAATATATACTCCATCCGTTCTAAAATATAAGTATTTTTAGCTATGAACGCTTATATTTTAAGACGGAGGGAGTACCAAACACTATTCATTATTGTCGATGCAAATTTCAGTGAAGATGTGACATCTTTGGTCAGGGAG-ACAAATGATCAGCCAATTGACAAGGTG-ATCTGATGCTCCTAGCTTCGTCTACCTATAGATTTATTTGTTGCTGCTCCCATCATCAGATCAGACCACCAGCTGTATGAGTATATACACAGTTTGTATGCTAAATTCTTTCTAAATAAACATCCTTATGCAAATGTGTTGATAAAAA]

[+] EMBL AK103858             [CTGCAGCTAGCTAGCTAAGCTTGGATAACAGTGCAAGGGCGCCGGACGGCTACTTGGTCCATGGCGTCTCTGACGATCGTCGTCGCCACCATCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCGCCGTCCATGGCCGGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTGTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAACTCCACGGCGGCGGCGGCCACCAAGCCGACGGCGCTGGCCAACGCCGTGCCGTCGACCGGCGGCACCTTCTTCGGCGAGGTGGTGGTGTTCAACGACCCGGTGACGGAGGGGAGGGCGCTGCCGCCGTCGCTGGAGGAGACGGCGGTGAGGGCGCAGGGGCTCTACCTCTACAACAGCAAGGAGGCGTTCAACGCGTGGCTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGTCGCGCGGCGTCGCCACCCTCCGCACCGACGCTTTCGAGGGCTTCACCTACTTCAGGCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTATGATGCATCCATCCATGGTCGTATAATATATACTCCATCCGTTCTAAAATATAAGTATTTTTAGCTATGAACGCTTATATTTTAAGACGGAGGGAGTACCAAACACTATTCATTATTGTCGATGCAAATTTCAGTGAAGATGTGACATCTTTGGTCAGGGAG ACAAATGATCAGCCAATTGACAAGGTG ATCTGATGCTCCTAGCTTCGTCTACCTATAGATTTATTTGTTGCTGCTCCCATCATCAGATCAGACCACCAGCTGTATGAGTATATACACAGTTTGTATGCTAAATTCTTTCTAAATAAACA                          ]
[+] EMBL AU089664             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCAGGGAGTACAAATGATCAGCCAATTGACAAGGTGCATCTGATGCTCCTAGCTTCGTCTACCTATACATTTATTTGTTGCTGCTCCCATCATCAGATCAGACCACCAGCTGTATGAGTATATACACAGTTTGTATGCTAAATTCTTTCTAAATAAACATCCTTATGCAAATGTGTTGATAAAAA]


>consensus_13888#1 CTGCAGCTAGCTAGCTAAGCTTGGATAACAGTGCAAGGGCGCCGGACGGCTACTTGGTCC ATGGCGTCTCTGACGATCGTCGTCGCCACCATCTTCCTGCTCAGCCTCACCTCGGCGAGC GTCGCCGTCCATGGCCGGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGC ATGGAGATGAGGCTGTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAAC TCCACGGCGGCGGCGGCCACCAAGCCGACGGCGCTGGCCAACGCCGTGCCGTCGACCGGC GGCACCTTCTTCGGCGAGGTGGTGGTGTTCAACGACCCGGTGACGGAGGGGAGGGCGCTG CCGCCGTCGCTGGAGGAGACGGCGGTGAGGGCGCAGGGGCTCTACCTCTACAACAGCAAG GAGGCGTTCAACGCGTGGCTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGGC ACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGTG GGCGGCACCGGCGACTTCTTCATGTCGCGCGGCGTCGCCACCCTCCGCACCGACGCTTTC GAGGGCTTCACCTACTTCAGGCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTATGA TGCATCCATCCATGGTCGTATAATATATACTCCATCCGTTCTAAAATATAAGTATTTTTA GCTATGAACGCTTATATTTTAAGACGGAGGGAGTACCAAACACTATTCATTATTGTCGAT GCAAATTTCAGTGAAGATGTGACATCTTTGGTCAGGGAGACAAATGATCAGCCAATTGAC AAGGTGATCTGATGCTCCTAGCTTCGTCTACCTATAGATTTATTTGTTGCTGCTCCCATC ATCAGATCAGACCACCAGCTGTATGAGTATATACACAGTTTGTATGCTAAATTCTTTCTA AATAAACATCCTTATGCAAATGTGTTGATAAAAA



consensusID : consensus_13888#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 929
fasta sequence
                              [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAGCATTGACAGGCACTTAGCTAAGTACGTAGCTATATAGCTTCTCCTGCTTGTTCATAATAAGCAAATAATTAACAATGCAAGGCCGGATGGTGACATGGTCCATGGCGTCTGTGATCGTCGCCGCGGCCTGCATCTTCCTCAGCTGCTCTGCGAGCGTCGCCCATGGAAGGAGATTCGTCAGGAGTAGTAGCTACGACAAGCCGTGCAAGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAACTCCACGTCGGCGGCGGCCACCAAGCCGACGGCGC-TGGCCACCGCCGTGCCGTCGACCGGCGGCACCTTCTTCGGGCAGGTGGTGGTGTTCAACGACCCGATGACGGAGGGGAGGGCGCTGCCGCCGTCGCTGGAGGAGACGGCGGTGCGCGCGCAGGGGGTCTACCTCTACAACAGCAAGGAGGCGTTCAACGCGTGGTTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACCCTCCGCACCGACGCCTTCGAGGGCTTCACCTACTTCCGGCTGCAGATGGACATCAAGCTCTACGAATGCTACGTCGTCTGATTACGTTGCTCTGAATTCTGATAGATGGTAATTAACATATAATACTGCTATACACGGTGTGATGCGTGATTTATTTCCATCGCGAAATATACTTGTTTGCTTGACGAGTTATATGCACCGATGAATGTGC-AAAATGTATCCCAAC-TTTGTTT-ATTTTCATTCAATAAA-GATGAA-GTTTGCTNTAAAAAAAAAAAAAAAAAAAAAG]

[+] EMBL AK106022             [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAGCATTGACAGGCACTTAGCTAAGTACGTAGCTATATAGCTTCTCCTGCTTGTTCATAATAAGCAAATAATTAACAATGCAAGGCCGGATGGTGACATGGTCCATGGCGTCTGTGATCGTCGCCGCGGCCTGCATCTTCCTCAGCTGCTCTGCGAGCGTCGCCCATGGAAGGAGATTCGTCAGGAGTAGTAGCTACGACAAGCCGTGCAAGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAACTCCACGTCGGCGGCGGCCACCAAGCCGACGGCGC TGGCCACCGCCGTGCCGTCGACCGGCGGCACCTTCTTCGGGCAGGTGGTGGTGTTCAACGACCCGATGACGGAGGGGAGGGCGCTGCCGCCGTCGCTGGAGGAGACGGCGGTGCGCGCGCAGGGGGTCTACCTCTACAACAGCAAGGAGGCGTTCAACGCGTGGTTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACCCTCCGCACCGACGCCTTCGAGGGCTTCACCTACTTCCGGCTGCAGATGGACATCAAGCTCTACGAATGCTACGTCGTCTGATTACGTTGCTCTGAATTCTGATAGATGGTAATTAACATATAATACTGCTATACACGGTGTGATGCGTGATTTATTTCCATCGCGAAATATACTTGTTTGCTTGACGAGTTATATGCACCGATGAATGTGC AAAATGTATCCCAAC TTTGTTT ATTTTCATTCAATAAA GATGA                                 ]
[+] EMBL OSR05571A            [                                        ACAGGCACTTAGCTAAGTACGTAGCTATATAGCTTCTCCTGATTGTTCATAATAAGCAAATAATTAACAATGCAAGGCCGGATGGTGACATGGTCCATGGCGTCTGTGATCGTCGCCGCGGCCTGCATCTTCCTCAGCTGCTCTGCGAGCGTCGCCCATGGAAGGAGATTCGTCAGGAGTAGTAGCTACGACAAGCCGTGCAAGGNGATGNGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAACTCCANGTNGGCGGCGGCCACCAAGCCGNCGGCGCTTGGCCACCGCCGTGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU065923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTACAACAGCAAGGAGGCGTTCAACGCGTGGTTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGGCACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACCCTCCGCACCGACGCCTTCGAGGGCTTCACCTACTTCCGGCTGCAGATGGACATCAAGCTCTACGAATGCTACGTCGTCTGATTACGTTGCTCTGAATTCTGATAGATGGTAATTAACATATAATACTGCTATACACGGTGTGATGCGTGATTTATTTCCATCGGGAAATATACTTGTTTGCTTTACGAGTTATATGCACCGATGAATTTTCAAAAATGTATCCCAACTTTTGTTTAATTTTAATTCAATAAAGGNTGAAGGTTTGCTNTAAAAAAAAAAAAAAAAAAAAAG]
[+] EMBL AU164576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGT GGCGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACCCTCCGCACCGACGCCTTCGAGGGCTTCACCTACTTCCGGCTGCAGATGGACATCAAGCTCTACGAATGCTACGTCGTCTGATTACGTTGCTCTGAATTCTGATAGATGGTAATTAACATATAATACTGCTATACACGGTGTGATGCGTGATTTATTTCCATCGCGAAATATACTTGTTTGCTTGACGAGTTATATGCACCGATGAATGTGC AAAATGTATCCCAAC TTTGTTT ATTTTCATTCAATAAA GATGAA GTTTGCTCTAAAAAAAAA             ]


>consensus_13888#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAGCATTGACAGGCACTTAGCTAAGTAC GTAGCTATATAGCTTCTCCTGCTTGTTCATAATAAGCAAATAATTAACAATGCAAGGCCG GATGGTGACATGGTCCATGGCGTCTGTGATCGTCGCCGCGGCCTGCATCTTCCTCAGCTG CTCTGCGAGCGTCGCCCATGGAAGGAGATTCGTCAGGAGTAGTAGCTACGACAAGCCGTG CAAGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAA CTCCACGTCGGCGGCGGCCACCAAGCCGACGGCGCTGGCCACCGCCGTGCCGTCGACCGG CGGCACCTTCTTCGGGCAGGTGGTGGTGTTCAACGACCCGATGACGGAGGGGAGGGCGCT GCCGCCGTCGCTGGAGGAGACGGCGGTGCGCGCGCAGGGGGTCTACCTCTACAACAGCAA GGAGGCGTTCAACGCGTGGTTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGG CACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCGT GGGCGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACCCTCCGCACCGACGCCTT CGAGGGCTTCACCTACTTCCGGCTGCAGATGGACATCAAGCTCTACGAATGCTACGTCGT CTGATTACGTTGCTCTGAATTCTGATAGATGGTAATTAACATATAATACTGCTATACACG GTGTGATGCGTGATTTATTTCCATCGCGAAATATACTTGTTTGCTTGACGAGTTATATGC ACCGATGAATGTGCAAAATGTATCCCAACTTTGTTTATTTTCATTCAATAAAGATGAAGT TTGCTNTAAAAAAAAAAAAAAAAAAAAAG



consensusID : consensus_13888#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 718
fasta sequence
                              [GCATGTGCGCGTTAGCTTANTTCTCACNAGCTGATCGATCACAGGTTATTCNATTAGTTAAGTTCAGCTACTTAATTAGCTAGCTCCATTACACTGCAAGCTAAGCCCANATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCTTCCTGCTCAGCCTCACCTCGGCGANCGTCGTCCATGGCCGGANCAACAGGAAGAAGTTCGTCAGGAGCTACGANGAACCGTGCATGGANATGANGCTCTNCCTCCACNACATCCTCTNCGANTNCAGCAACAGCACCACCAACTCCACGTTNGGGGGGGGCTCCAAGCCNACNGCGCTGAACACCCCGTGTCNAACCCCGGCTACTTCTTCCGCAGGGTGGTGGTGTTCAACCAACCCATNACAGANGGGAAGGCCTCCCCGTCCCTTGAAGAAACGGCNGTTNAAGGCGCAAGGGGCTCTTACCTTCTCCACAAGAAAGGANGANTTCCNNCNCCGTTGGTTCCCCCTTCCTCCATNCGTTGTTTCCAAATCCCACCGGGGNCGCCCCCCGGGNACCCCTCTAACCCTCCCNTTGGGGCGCCCCNAACCCCCCAAACCNCCCNNCNAAACAAAANGGGAANCTTCCTNCCCCTTTGGGTTTGGGGGGCGGGGNAANCCCNGGGGCNAAANATTCCCCTCCCCNTTNTTTCNCCGCCCGGGGGGTTTTTNNCCCNANC]

[+] EMBL BE229782             [GCATGTGCGCGTTAGCTTANTTCTCACNAGCTGATCGATCACAGGTTATTCNATTAGTTAAGTTCAGCTACTTAATTAGCTAGCTCCATTACACTGCAAGCTAAGCCCANATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCTTCCTGCTCAGCCTCACCTCGGCGANCGTCGTCCATGGCCGGANCAACAGGAAGAAGTTCGTCAGGAGCTACGANGAACCGTGCATGGANATGANGCTCTNCCTCCACNACATCCTCTNCGANTNCAGCAACAGCACCACCAACTCCACGTTNGGGGGGGGCTCCAAGCCNACNGCGCTGAACACCCCGTGTCNAACCCCGGCTACTTCTTCCGCAGGGTGGTGGTGTTCAACCAACCCATNACAGANGGGAAGGCCTCCCCGTCCCTTGAAGAAACGGCNGTTNAAGGCGCAAGGGGCTCTTACCTTCTCCACAAGAAAGGANGANTTCCNNCNCCGTTGGTTCCCCCTTCCTCCATNCGTTGTTTCCAAATCCCACCGGGGNCGCCCCCCGGGNACCCCTCTAACCCTCCCNTTGGGGCGCCCCNAACCCCCCAAACCNCCCNNCNAAACAAAANGGGAANCTTCCTNCCCCTTTGGGTTTGGGGGGCGGGGNAANCCCNGGGGCNAAANATTCCCCTCCCCNTTNTTTCNCCGCCCGGGGGGTTTTTNNCCCNANC]


>consensus_13888#3 GCATGTGCGCGTTAGCTTANTTCTCACNAGCTGATCGATCACAGGTTATTCNATTAGTTA AGTTCAGCTACTTAATTAGCTAGCTCCATTACACTGCAAGCTAAGCCCANATCGATGGCA GCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCTTCCTGCTCAGCCTCACCTCG GCGANCGTCGTCCATGGCCGGANCAACAGGAAGAAGTTCGTCAGGAGCTACGANGAACCG TGCATGGANATGANGCTCTNCCTCCACNACATCCTCTNCGANTNCAGCAACAGCACCACC AACTCCACGTTNGGGGGGGGCTCCAAGCCNACNGCGCTGAACACCCCGTGTCNAACCCCG GCTACTTCTTCCGCAGGGTGGTGGTGTTCAACCAACCCATNACAGANGGGAAGGCCTCCC CGTCCCTTGAAGAAACGGCNGTTNAAGGCGCAAGGGGCTCTTACCTTCTCCACAAGAAAG GANGANTTCCNNCNCCGTTGGTTCCCCCTTCCTCCATNCGTTGTTTCCAAATCCCACCGG GGNCGCCCCCCGGGNACCCCTCTAACCCTCCCNTTGGGGCGCCCCNAACCCCCCAAACCN CCCNNCNAAACAAAANGGGAANCTTCCTNCCCCTTTGGGTTTGGGGGGCGGGGNAANCCC NGGGGCNAAANATTCCCCTCCCCNTTNTTTCNCCGCCCGGGGGGTTTTTNNCCCNANC



consensusID : consensus_13888#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 635
fasta sequence
                              [AGCTAACACGTACTGTTTTGCATGCGCGCGCTTAGCTTAATTCTCACGAGCTGATCGATCACAGGTTATTCAATTAGTTAAGTTCAGCTACTTAATTAGCTAGCTCCATTACACTGCAAGCTAGGCCCAGATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCGTCCATGGCCGGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCACCAACTCCACGTCGGCGGCGGCCACCAAGCCGAAGGCGCTGAGCACCGCCGTGTCGAGCCCCGGCTACTTCTTCGGGCGGGTGGTGGTGTTCAACNACCCNATNACCGANGGGANGGCGCTGCCGCCGTCCCTNGAAGAAACGGCGGTGAAGGCGCATGGGCTCTACCTTCTCNACNAGAANGACNACTTCNGCGCGTGGTTCGCCTTCTCCCTCGTGTTCAACTCCACGGGGCGCCGCGGNACGCTCAACCTCCNTGGGGCGCCGAACCCAACCCCGCGAACAAAGGGACATCTCCNTGGTGGGNGGGCACCCGNC]

[+] EMBL AU096400             [AGCTAACACGTACTGTTTTGCATGCGCGCGCTTAGCTTAATTCTCACGAGCTGATCGATCACAGGTTATTCAATTAGTTAAGTTCAGCTACTTAATTAGCTAGCTCCATTACACTGCAAGCTAGGCCCAGATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCGTCCATGGCCGGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCACCAACTCCACGTCGGCGGCGGCCACCAAGCCGAAGGCGCTGAGCACCGCCGTGTCGAGCCCCGGCTACTTCTTCGGGC                                                                                                                                                                                                                                               ]
[+] EMBL BE229773             [                              gTTAGCTTAATTCTCACGAGCTGATCGATCACNGGTTATTCNATTAGTTANGTTCAGCTACTTAATTAGCTNGCTCCATTACNCTGCAAGCTAAGCCCAGATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCGTCCATGGCCGGAGCANCAGGANGAGGTTCGTCAGGAGCTACCACGANCCGTGCATGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTNCAGCAACAGCACCNCCAACTCCACGTCGGCGGCGGCCACCAAGCCGACGGCGCTGANCACCGCCGTGTCNANCCCCGGCTACTTCTTCGGCAGGGTGGTGGTGTTCAACNACCCNATNACCGANGGGANGGCGCTGCCGCCGTCCCTNGAAGAAACGGCGGTGAAGGCGCATGGGCTCTACCTTCTCNACNAGAANGACNACTTCNGCGCGTGGTTCGCCTTCTCCCTCGTGTTCAACTCCACGGGGCGCCGCGGNACGCTCAACCTCCNTGGGGCGCCGAACCCAACCCCGCGAACAAAGGGACATCTCCNTGGTGGGNGGGCACCCGNC]


>consensus_13888#4 AGCTAACACGTACTGTTTTGCATGCGCGCGCTTAGCTTAATTCTCACGAGCTGATCGATC ACAGGTTATTCAATTAGTTAAGTTCAGCTACTTAATTAGCTAGCTCCATTACACTGCAAG CTAGGCCCAGATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGATCGTCGCCGCCATCT TCCTGCTCAGCCTCACCTCGGCGAGCGTCGTCCATGGCCGGAGCAGCAGGAGGAGGTTCG TCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTCTACCTCCACGACATCCTCTACG ACTACAGCAACAGCACCACCAACTCCACGTCGGCGGCGGCCACCAAGCCGAAGGCGCTGA GCACCGCCGTGTCGAGCCCCGGCTACTTCTTCGGGCGGGTGGTGGTGTTCAACNACCCNA TNACCGANGGGANGGCGCTGCCGCCGTCCCTNGAAGAAACGGCGGTGAAGGCGCATGGGC TCTACCTTCTCNACNAGAANGACNACTTCNGCGCGTGGTTCGCCTTCTCCCTCGTGTTCA ACTCCACGGGGCGCCGCGGNACGCTCAACCTCCNTGGGGCGCCGAACCCAACCCCGCGAA CAAAGGGACATCTCCNTGGTGGGNGGGCACCCGNC



consensusID : consensus_13888#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 328
fasta sequence
                              [GAGATGAGGGACATCTCCGTCGTGGGCGGCACCGGTGACTTCTTCATGTCCCGCGGCGTCGCCACGCTCCGCACCGACGCCTTCGAGGGATTCACCTACTTCCGGCTGCAGATGGACATCAAACTCTATGAATGCTACGTCTGATAACTAATTAATCGATGCATGCATGGTGTGTGTGTGTGTGTATAGTAAACGTTTTATATGTCGATTGATGTGGTGTTTATTTAAAAGGAATTTGTTTCTCGATATTAGTATTTACTTGATGACGAGTACCTGCAGTATCTGTATGCACCGATGAGTGTGCAAATAAATGTAAACCAAACCCATT]

[+] EMBL BE530925             [GAGATGAGGGACATCTCCGTCGTGGGCGGCACCGGTGACTTCTTCATGTCCCGCGGCGTCGCCACGCTCCGCACCGACGCCTTCGAGGGATTCACCTACTTCCGGCTGCAGATGGACATCAAACTCTATGAATGCTACGTCTGATAACTAATTAATCGATGCATGCATGGTGTGTGTGTGTGTGTATAGTAAACGTTTTATATGTCGATTGATGTGGTGTTTATTTAAAAGGAATTTGTTTCTCGATATTAGTATTTACTTGATGACGAGTACCTGCAGTATCTGTATGCACCGATGAGTGTGCAAATAAATGTAAACCAAACCCATT]


>consensus_13888#5 GAGATGAGGGACATCTCCGTCGTGGGCGGCACCGGTGACTTCTTCATGTCCCGCGGCGTC GCCACGCTCCGCACCGACGCCTTCGAGGGATTCACCTACTTCCGGCTGCAGATGGACATC AAACTCTATGAATGCTACGTCTGATAACTAATTAATCGATGCATGCATGGTGTGTGTGTG TGTGTATAGTAAACGTTTTATATGTCGATTGATGTGGTGTTTATTTAAAAGGAATTTGTT TCTCGATATTAGTATTTACTTGATGACGAGTACCTGCAGTATCTGTATGCACCGATGAGT GTGCAAATAAATGTAAACCAAACCCATT



consensusID : consensus_13888#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 316
fasta sequence
                              [GCCGACCCCAACACCNAGATGAGGGACATCTCCGTCGTGGGCGGCACCGGTGACTTCTTCATGTCCCGCGGCGTCGCCACNTCCGCACCGACNCCTTCGAGGGATTCACCTACTTCCGGCTGCAGATGGACATCAAACTCTATGAATGCTACGTCTGATAACTAATTAATCGATGATGTGGTGTTTATTTAAAAGGAATTTGTTTCTCGATATTAGTATTTACTTGATGACGAGTACCTGCAGTATCTGTATGCACCGATGAGTGTGCAAATAAATGTAACCCAAACCCATTTATNTTTAAAAAAAAAAAAAAAAA]

[+] EMBL AU033250             [GCCGACCCCAACACCNAGATGAGGGACATCTCCGTCGTGGGCGGCACCGGTGACTTCTTCATGTCCCGCGGCGTCGCCACNTCCGCACCGACNCCTTCGAGGGATTCACCTACTTCCGGCTGCAGATGGACATCAAACTCTATGAATGCTACGTCTGATAACTAATTAATCGATGATGTGGTGTTTATTTAAAAGGAATTTGTTTCTCGATATTAGTATTTACTTGATGACGAGTACCTGCAGTATCTGTATGCACCGATGAGTGTGCAAATAAATGTAACCCAAACCCATTTATNTTTAAAAAAAAAAAAAAAAA]


>consensus_13888#6 GCCGACCCCAACACCNAGATGAGGGACATCTCCGTCGTGGGCGGCACCGGTGACTTCTTC ATGTCCCGCGGCGTCGCCACNTCCGCACCGACNCCTTCGAGGGATTCACCTACTTCCGGC TGCAGATGGACATCAAACTCTATGAATGCTACGTCTGATAACTAATTAATCGATGATGTG GTGTTTATTTAAAAGGAATTTGTTTCTCGATATTAGTATTTACTTGATGACGAGTACCTG CAGTATCTGTATGCACCGATGAGTGTGCAAATAAATGTAACCCAAACCCATTTATNTTTA AAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAGCATTGACAGGCACTTAGCTAAGTAC 60
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      GTAGCTATATAGCTTCTCCTGCTTGTTCATAATAAGCAAATAATTAACAATGCAAGGCCG 120
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      GATGGTGACATGGTCCATGGCGTCTGTGATCGTCGCCGCGGCCTGCATCTTCCTCAGCTG 180
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      CTCTGCGAGCGTCGCCCATGGAAGGAGATTCGTCAGGAGTAGTAGCTACGACAAGCCGTG 240
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      CAAGGAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAA 300
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      CTCCACGTCGGCGGCGGCCACCAAGCCGACGGCGCTGGCCACCGCCGTGCCGTCGACCGG 360
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      CGGCACCTTCTTCGGGCAGGTGGTGGTGTTCAACGACCCGATGACGGAGGGGAGGGCGCT 420
                                                                                   

consensus_13888#3      -------------------------------GCATGTGCGCG-TTAGCTTANTTCTCACN 28
consensus_13888#4      ------------AGCTAACACGTACTGTTTTGCATGCGCGCGCTTAGCTTAATTCTCACG 48
consensus_13888#1      ------------------------------------------------------------
consensus_13888#0      ------------------------------------------------------------
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      GCCGCCGTCGCTGGAGGAGACGGCGGTGCGCGCGCAGGGGGTCTACCTCTACAACAGCAA 480
                                                                                   

consensus_13888#3      AGCTGATCGATCACAGGTTATTCNATTAGTTAAGTTC--AGCTACTTAA-TTAGCTAGCT 85
consensus_13888#4      AGCTGATCGATCACAGGTTATTCAATTAGTTAAGTTC--AGCTACTTAA-TTAGCTAGCT 105
consensus_13888#1      ---------------------------------CTGC--AGCTAGCTAG-CTAAGC--TT 22
consensus_13888#0      GCAGCAACGTACGCGTACTGTCTAGTTAGCTAGCTTCTTAGCTTCGAACCTTCGATCTCT 60
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      GGAGGCGTTCAACGCGTGGTTCGCCTTCTCCATCGTGTTCAACTCCACGGGGCGCCGCGG 540
                                                                                   

consensus_13888#3      CCATTACACTGCAAGCTAAGCCCANATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGA 145
consensus_13888#4      CCATTACACTGCAAGCTAGGCCCAGATCGATGGCAGCTTGGTCCATGGCGTCTCTGATGA 165
consensus_13888#1      GGATAACAGTGCAAG---GGCGCCG---GACGGCTACTTGGTCCATGGCGTCTCTGACGA 76
consensus_13888#0      CGATCACAG-GCTAATCAAGCTTAGCTTGATGGCAACTTGGTCCAATGCGTCGTCTCTGA 119
consensus_13888#5      ----------------------------------GAGA---TGAGGGACATCTCCGTCG- 22
consensus_13888#6      -------------------GCCGACCCCAACACCNAGA---TGAGGGACATCTCCGTCG- 37
consensus_13888#2      CACGCTCAACCTCATGGGCGCCGACATCATCGCCGAGAAGACGAGGGACATCTCCGTCG- 599
                                                                       * **      * 

consensus_13888#3      TCGTCGCCGCCA---TCTTCCTGCTCAGCCTCACCTCGGCGANCGTCG---TCCATGGCC 199
consensus_13888#4      TCGTCGCCGCCA---TCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCG---TCCATGGCC 219
consensus_13888#1      TCGTCGTCGCCACCATCTTCCTGCTCAGCCTCACCTCGGCGAGCGTCGCCGTCCATGGCC 136
consensus_13888#0      TCGTCGCCGCCG---TAATTCTGCTTGGCCTCAGCTCGGCAAGCGTCG---CGCATGGCC 173
consensus_13888#5      TGGGCGGCACCG----GTGACTTCTTCATGTC-CCGCGGCG-TCGCCACGCTCCGCA-CC 75
consensus_13888#6      TGGGCGGCACCG----GTGACTTCTTCATGTC-CCGCGGCG-TCGCCACN-TCCGCA-CC 89
consensus_13888#2      TGGGCGGCACCG----GCGACTTCTTCATGTC-CCGCGGCG-TCGCCACCCTCCGCA-CC 652
                       * * ** * **         ** **     **  * ****   ** *      *    **

consensus_13888#3      GGANCAACAGGAAGAAGTTCGTCAGGAGCTACGANGAACCGTGCATGGANATGANGCTCT 259
consensus_13888#4      GGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTCT 279
consensus_13888#1      GGAGCAGCAGGAGGAGGTTCGTCAGGAGCTACGACGAGCCGTGCATGGAGATGAGGCTGT 196
consensus_13888#0      GCCGCGGCAGGAGGAGCTTCGTCTCCAGCTACGACGAGCCGTGCATGGAGATGAGGCTGT 233
consensus_13888#5      GACGCCTTCGAGGGA--TTCAC------CTACTTCCGGCTGCAGATGGACATCAAACTCT 127
consensus_13888#6      GACNCCTTCGAGGGA--TTCAC------CTACTTCCGGCTGCAGATGGACATCAAACTCT 141
consensus_13888#2      GACGCCTTCGAGGGC--TTCAC------CTACTTCCGGCTGCAGATGGACATCAAGCTCT 704
                       *   *    *   *   ***        ****      * *   ***** ** *  ** *

consensus_13888#3      NCCTCCACNACATCCTCTNCGANTNCAGCAACAGCACCACCAACTCCACGTTNGGGGGGG 319
consensus_13888#4      ACCTCCACGACATCCTCTACGACTACAGCAACAGCACCACCAACTCCACGTCGGCGGCGG 339
consensus_13888#1      ACCTCCACGACATCCTCTACGACTACAGCAACAGCACCTCCAACTCCACGGCGGCGGCGG 256
consensus_13888#0      ACCTCCACGACATCATCTACGACTACAGTAACAGCACCTCCAACTCCACGTCGGCGGCGG 293
consensus_13888#5      ATGAATGCTACGTC--TGATAACTA-ATTAATCGATGCATGCATGGTGTGTGTGTGTGTG 184
consensus_13888#6      ATGAATGCTACGTC--TGATAACTA-ATTAATCGATG----------------------- 175
consensus_13888#2      ACGAATGCTACGTC--GTCTGATTACGTTGCTCTGAATTCTGATAGATGGTAATTAA--- 759
                              * ** **       * *                                    

consensus_13888#3      GCTCCAAGCCNACNGCGCTGAACACC-CCGTG---TCNAACCCCGGC--TACTTCTTCCG 373
consensus_13888#4      CCACCAAGCCGAAGGCGCTGAGCACCGCCGTG---TCGAGCCCCGGC--TACTTCTTCGG 394
consensus_13888#1      CCACCAAGCCGACGGCGCTGGCCAACGCCGTGCCGTCGACCGGCGGC--ACCTTCTTCGG 314
consensus_13888#0      CCACCAAGCCGACGCCGCTGAGCACCGCCGTG---TCCAACCCCGGC--TACTTCTTCGG 348
consensus_13888#5      TATAGTAAACGTTTTATATGTCGATTGATGTGGTGTTTATTTAAAA---GGAATTTGTTT 241
consensus_13888#6      ---------------------------ATGTGGTGTTTATTTAAAA---GGAATTTGTTT 205
consensus_13888#2      -CATATAATACTGCTATACACGGTGTGATGCGTGATTTATTTCCATCGCGAAATATACTT 818
                                                    * *   *  *              * *    

consensus_13888#3      CAGGGTGGTGGTGTTCAACCAACCCATNACAGANGGGAAGGCCT---CCCCGTCCC---- 426
consensus_13888#4      GCGGGTGGTGGTGTTCAACNACCCNATNACCGANGGGANGGCGCTGCCGCCGTCCC---- 450
consensus_13888#1      CGAGGTGGTGGTGTTCAACGACCCGGTGACGGAGGGGAGGGCGCTGCCGCCGTCGC---- 370
consensus_13888#0      CGAGATGGTGGTGTTCAACGACCCCATGACGGAGGGGAGGGCGCTGCCGCCGTCGCCGGC 408
consensus_13888#5      CTCGATATTAGTATTTACTTGA----TGACG--AGTACCTGCAGTATCTGTATGCA---- 291
consensus_13888#6      CTCGATATTAGTATTTACTTGA----TGACG--AGTACCTGCAGTATCTGTATGCA---- 255
consensus_13888#2      GTTTGCTTGACGAGTTATATGCAC--CGATG--AATGTGCAAAATGTATCCCAACT---- 870
                                     * *           *                               

consensus_13888#3      --TTGAAGAAACGGCNGTTNAAGGCGCAAGGGGCTCTTACCTTCTCCACAAGAAAGGANG 484
consensus_13888#4      --TNGAAGAAACGGCGGT-GAAGGCGCATGGG--CTCTACCTTCTCNACNAGAANG-ACN 504
consensus_13888#1      --TGGAGGAGACGGCGGT-GAGGGCGCAGGGG--CTCTACCTCTACAACAGCAAGG-AGG 424
consensus_13888#0      GATGGAGGAGGAGACGGCAGTGCGCGCGCAGGGGGTCTACCTCTACGACAAGAAGG-AGG 467
consensus_13888#5      --CCGATGAGTGTGCAAATAAATGTAAACCAAACCCATT--------------------- 328
consensus_13888#6      --CCGATGAGTGTGCAAATAAATGTAACCCAAACCCATTTATNTTTAAAAAAAAAAAAAA 313
consensus_13888#2      --TTGTTTATTTTC--ATTCAATAAAGATGAAGTTTGCTNTAAAAAAAAAAAAAAAAAAA 926
                           *   *                                                   

consensus_13888#3      ANTTCCNNCNCCGTTGGTTCCCCCTTCCTCCATNCGTTGTTTCCAAATCCCACCGGGGNC 544
consensus_13888#4      ACTTCNGCGC---GTGGTTCGCCTTCTCCC------TCGTGTTCAA-CTCCAC--GGGGC 552
consensus_13888#1      CGTTCAACGC---GTGGCTCGCCTTCTCCA------TCGTGTTCAA-CTCCAC--GGGGC 472
consensus_13888#0      CGCCCAACGC---GTGGTTCGCCTTCTCCG------TGGTGTTCAA-CTCCAC--GGGGC 515
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      AAA--------------------------------------------------------- 316
consensus_13888#2      AAG--------------------------------------------------------- 929
                                                                                   

consensus_13888#3      GCCCCCCGGGNACCCCTCTAACCCTCCCNTTGGGGCGCCCCNAACCCCCCAAAC-CNCCC 603
consensus_13888#4      GCCGC---GGNACGCTC--AACCTCCNTGGGGCGCCGAACCCAACCCCGCGAAC-AAAGG 606
consensus_13888#1      GCCGC---GGCACGCTC---AACCTCATGG-GCGCCGACATCATCGCCGAGAAGACGAGG 525
consensus_13888#0      GCCGC---GGCACGCTC---AACCTGATGG-GCGCCGACCTCATGTCGGAGAAGACGAGG 568
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      NNCNAAACAA-AANGGGAANCTTCC-TNCCCCTTTGGGTTTGGGGGGCGGGGNAANCCCN 661
consensus_13888#4      GACATCTCCNTGGTGGGNGGGCACC-CGNC------------------------------ 635
consensus_13888#1      GACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGTCGCGCGGCGTCGCCACCCTC 585
consensus_13888#0      GACCTCTCCGTCGTGGGTGGCACCGGCGACTTCTTCATGTCCCGCGGCGTCGCCACGCTC 628
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      GGGGCNAAANA---TTCCC----CTCCCCNTTNTTTCNCCGCCCGGGGGGTTTTTNNCCC 714
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      CGCACCGACGC---TTTCGAGGGCTTCACCTACTTCAGGCTGCAGATGGACATCAAGCTC 642
consensus_13888#0      AGCACCGACGAGGCCTCGGCGGACTTGTCATACTTCCGGGTGAAGGTGGACATCAAGCTC 688
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      NANC-------------------------------------------------------- 718
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      TACGAGTGCTACGTATGATGCATCCATCCATGGTCGTATAATATATACTCCATCCGTTCT 702
consensus_13888#0      TACGAATGCTACGTCTGAT-CCCATGCATACGTACGCTTGCTCTTTCATGGCCGTGGATC 747
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      AAAATATAAGTATTTTTAGCTATGAACGCTTATATTTTAAGACGGAGGGAGTACCAAACA 762
consensus_13888#0      GGATCATCGCGTGTCCTAAATATGCGCTTGTAT---TTGTGTGATTGTGTGTGTTGAATT 804
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      CTATTCATTATTGTCGATGCAAATTTCAGTGAAGATGTGACATCTTTGGTCAGGGAGACA 822
consensus_13888#0      TCCTTCTTGACATTCATCATCTTTGCGTGACGAGTCATATGCACGGAGAAATGTGCAAAA 864
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      AATGATCAGCCAATTGACAAGGTGATCTGATGCTCCTAGCTTCGTCTACCTATAGATTTA 882
consensus_13888#0      TGTGTTTTTTTTTTCGTGTTTTGGATTTGCATCTCATGTATTGTTTGAGTGACGAGTCAG 924
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      TTTGTTGCT-GCTCCCATCATCAGATCAGACCACCAGCTGTATGAGTATATACACAGTTT 941
consensus_13888#0      CGATCGGCTTGGCGTGGTGGTTTGTTTTGTCTTTCTTTTTCCTGGTTATAATCTTCATAG 984
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      ------------------------------------------------------------
consensus_13888#4      ------------------------------------------------------------
consensus_13888#1      GTATGCTAAATTCTTTCTAAATAAACATCCTTATGCAAATGTGTTGATAAAAA------- 994
consensus_13888#0      TTATAATCTTATAATTTTTTTTCTACATCAATATAAAATCTTGTATTAAAAAAAAAAAAA 1044
consensus_13888#5      ------------------------------------------------------------
consensus_13888#6      ------------------------------------------------------------
consensus_13888#2      ------------------------------------------------------------
                                                                                   

consensus_13888#3      ------
consensus_13888#4      ------
consensus_13888#1      ------
consensus_13888#0      AAAAAA 1050
consensus_13888#5      ------
consensus_13888#6      ------
consensus_13888#2      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)