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Oryza sativa
cluster # 13898 cluster # 13898       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13898#0 length = 1730 sequences # 3  
consensus_13898#1 length = 1345 sequences # 11  

consensusID : consensus_13898#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1730
fasta sequence
                              [CTGAAGAACAATGGTAGACAGGAACAGGTGTAGATGTTCCTTGCTGCCCCCTTATTGTATCAGCATCACAGAAATGTGAAAGATAAAATAGCTTGTTTCCTATACTATGCCCACCTGAGAGGCGAGTTAATGCGTCCTGGTAGCTCATTTCCTTTATTTTACAGTGTGTGACTAAGAAGATTAACATATCATGTTCTCGTTTTCATGTATAGGTGGTAACCATACAAGCTGTTGTTGAAGCATTTGCTAGTCTGCCTGATAATTCTATTGCCTTCAGAATTGATGATGACCACAAGTACGTCTTTAGATAATTTCCTCTCTGATGTGAATTGTGATGCTCAAGATGCAGAGAAGGCAGATTGTGCCAGACTCTCCTCTTCGGTCCATTCCAGGCTACTGTTTGCTGCTGATCGAGTGAATCAAATGGTGCTCAACGTGGTCTTGATATGGAGTGAATGGCCATAGAATCTAATTCCACAGATGGCAAGATCACATCCAAGCTTCTCGTATTCCACCAAGAAACTATTCCTGGGAGCAAATTCTGTGCCAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGAGGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGTACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTACAGGTTTGAGACATGCACAATGACATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGGCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGC-TCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGA-CGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGG-CNGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGNAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGTTTATGGAGAGAGAGAAGAGAGAAGAGAGAGAGAGAGAGAGGAGGGAAGGAGAAGGTGGTGGCAACATTTTAAAGGAGCAAATGGGTGAGTGGGAGCTGGGAATTTGGGTTTGTTAGGGATTAAATTATTTAGTGGTGTTGCACATGTGGGAGCTCTTTCTGTGGAGGTTTTTATTTCTTGATATTTAGTGGAGAATATTCCACAATATCGATTATTTATCTTATGAGAATCAAGGA]

[+] EMBL AK106641             [CTGAAGAACAATGGTAGACAGGAACAGGTGTAGATGTTCCTTGCTGCCCCCTTATTGTATCAGCATCACAGAAATGTGAAAGATAAAATAGCTTGTTTCCTATACTATGCCCACCTGAGAGGCGAGTTAATGCGTCCTGGTAGCTCATTTCCTTTATTTTACAGTGTGTGACTAAGAAGATTAACATATCATGTTCTCGTTTTCATGTATAGGTGGTAACCATACAAGCTGTTGTTGAAGCATTTGCTAGTCTGCCTGATAATTCTATTGCCTTCAGAATTGATGATGACCACAAGTACGTCTTTAGATAATTTCCTCTCTGATGTGAATTGTGATGCTCAAGATGCAGAGAAGGCAGATTGTGCCAGACTCTCCTCTTCGGTCCATTCCAGGCTACTGTTTGCTGCTGATCGAGTGAATCAAATGGTGCTCAACGTGGTCTTGATATGGAGTGAATGGCCATAGAATCTAATTCCACAGATGGCAAGATCACATCCAAGCTTCTCGTATTCCACCAAGAAACTATTCCTGGGAGCAAATTCTGTGCCAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGAGGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGTACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTACAGGTTTGAGACATGCACAATGACATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGGCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGC TCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGA CGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGG CGGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTCCTTGTCAAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGGAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGTTTATGGAGAGAGAGAAGAGAGAAGAGAGAGAGAGAGAGAGGAGGGAAGGAGAAGGTGGTGGCAACATTTTAAAGGAGCAAATGGGTGAGTGGGAGCTGGGAATTTGGGTTTGTTAGGGATTAAATTATTTAGTGGTGTTGCACATGTGGGAGCTCTTTCTGTGGAGGTTTTTATTTCTTGATATTTAGTGGAGAATATTCCACAATATCGATTATTTATCTTATGAGAATCAAGGA]
[-] EMBL C72818               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cnCGACGATTCCAAGCCCGAC CC GTTGCGCCNCCGTCGAAAGT CGCTTCGGCCTCGGCTCGGGGNAGCTTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGA CGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGG CNGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGACNGNAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGCACACCAATGGTGAGGTTTATGGAGAGAGAGAAGAGnang                                                                                                                                                                                                                     ]
[-] EMBL OSC473               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        C TAACTGNCCCGAGAAAGGTGAAGAANAGGTTGGCGAAGGACCGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGGACCTCGCCGGACNGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGNNCANAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTG                                                                                                                                                                                                                                                ]


>consensus_13898#0 CTGAAGAACAATGGTAGACAGGAACAGGTGTAGATGTTCCTTGCTGCCCCCTTATTGTAT CAGCATCACAGAAATGTGAAAGATAAAATAGCTTGTTTCCTATACTATGCCCACCTGAGA GGCGAGTTAATGCGTCCTGGTAGCTCATTTCCTTTATTTTACAGTGTGTGACTAAGAAGA TTAACATATCATGTTCTCGTTTTCATGTATAGGTGGTAACCATACAAGCTGTTGTTGAAG CATTTGCTAGTCTGCCTGATAATTCTATTGCCTTCAGAATTGATGATGACCACAAGTACG TCTTTAGATAATTTCCTCTCTGATGTGAATTGTGATGCTCAAGATGCAGAGAAGGCAGAT TGTGCCAGACTCTCCTCTTCGGTCCATTCCAGGCTACTGTTTGCTGCTGATCGAGTGAAT CAAATGGTGCTCAACGTGGTCTTGATATGGAGTGAATGGCCATAGAATCTAATTCCACAG ATGGCAAGATCACATCCAAGCTTCTCGTATTCCACCAAGAAACTATTCCTGGGAGCAAAT TCTGTGCCAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATC GACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAG TAGTCGTTGGCCTTGAGGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATC TGGTGGCACCTGTACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTACAGGTTTGAGACATG CACAATGACATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAG TCAGCCGCCGGCGCCGGCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCG AACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGC GTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCC GCCGCGCCGATGGCGATCGGCTCGGCCTCGGTTCAGGCAGGCGTGGCTCATGGCCGCGAC GATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGG GGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCCGCCGT CAGCTTGGTGATGGAGCCGAGCCTCGCCGGCNGTGGTGCCTTCCGCTCGGTTGCCTGCTC AAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGA TGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGNAGAGA GAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTG CAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGTTTATGG AGAGAGAGAAGAGAGAAGAGAGAGAGAGAGAGAGGAGGGAAGGAGAAGGTGGTGGCAACA TTTTAAAGGAGCAAATGGGTGAGTGGGAGCTGGGAATTTGGGTTTGTTAGGGATTAAATT ATTTAGTGGTGTTGCACATGTGGGAGCTCTTTCTGTGGAGGTTTTTATTTCTTGATATTT AGTGGAGAATATTCCACAATATCGATTATTTATCTTATGAGAATCAAGGA



consensusID : consensus_13898#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1345
fasta sequence
                              [TTTTTTTTTACTGAAATTCGGTTATTCATTAGAACAAATCTGTCGTCTAGACCATAAAACTTTTACCTGAGCCAATTATGCACCTGATATGTAATACACTCTCTCTTACTGAAATTTCAGAAGAGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTC-TTCATCTGTTTAAT-CTGTTTC-TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTCTATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGA-GGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGG---CTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGGAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGTTTATGGAGAGAGAGAAGAGAGAAGAG]

[-] EMBL AU075506             [TTTTTTTTTACTGAAATTCGGTTATTCATTAGAACAAATCTGTCGTCTAGACCATAAAACTTTTACCTGAGCCAATTATGCACCTGATATGTAATACACTCTCTCTTACTGAAATTTCAGAAGAGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACG AGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTCTTTCATCTGTTTAATCCTGTTTCTTTTAGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL C99224               [                                  ttttttTGTCGTCTAGACCATAAAACTTTTACCTGAGCCAATTATGCACCTGATATGTAATACACTCTCTCTTACTGAAATTTCAGAAGAGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTC TTCATCTGTTTAAT CTGTTTC TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTCTATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGA GGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AU094084             [                                            tttTAGACCATAAAACTTTTACCTGAGCCAATTATGCACCTGATATGTAATACACTCTCTCTTACTGAAATTTCAGAAGAGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTC TTCATCTGTTTAAT CTGTTTC TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTCTATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGA GGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGG    TCCTCGTCGGCTTCCACAAGCCAGCCGttgtaac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB659666             [                                                 GACCATAAAACTTTTACCTGAGCCAATTATGCCCCTGATATGTAATACACTCTCTCTTACTGAAATTTCAGAAGAGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTC TTCATCTGTTTAAT CTGTTTC TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTCTATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGA GGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGG   CTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB620297             [                                                                                                                           AGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTC TTCATCTGTTTAAT CTGTTTC TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTATATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGTGCAGAGTGCGGCGAGGCTGAGTAGTCGTTGGCCTTGA GGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGGCTCCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGTCGCGCCGATGGCGATCGGGTCGGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AK072843             [                                                                                                                               CATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTC TTCATCTGTTTAAT CTGTTTC TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTCTATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGA GGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGG   CTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGTTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGGAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGTTTATGGAGAGAGAGAAGAGAGAAGAG]
[+] EMBL CB620298             [                                                                                                                                   ACATCAAATTCCTTTACTCTTTACTTCTGCTCGTACATAATATTGCAAGCACGAAGTTTCCAGTGTCTTGCGGGGAGCATATAATCTCAAAACTTTC TTCATCTGTTTAAT CTGTTTC TTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCTCTCTATATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGTGCAAAGTGCGGCGAGGCTGAGTAGTCGTTGGCCTTGA GGGCTTCAAATCCACAGTTGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGGCTCCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGTCGCGCCGATGGCa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CA755832             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCGCAGAGTGCGGCGAGNCCGAGTAGTCGTTGGCC TGAGGGGCTTCAGATCCACAGTNGTCTGCATGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGG   CTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGCCTTCCGCTCGGTTGCCTGC                                                                                                                                                                                                                                                                      ]
[-] EMBL CB659665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAGAAGTCAGCCGCCGGCGCCGG   CTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGGAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATGTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGagga                       ]
[-] EMBL CF324708             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCGCCGG   CTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCGCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACGTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGAGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGCCGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGCTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGC                                                                                                                                                                                                                                                                                         ]
[-] EMBL OSS14916A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCGTCAGGCA GCGTGGCTCATGGCCNCGACGATGCCAAGCACGAC CCGGT GCGCCGCCGTCGAAACTNCGCCTCGGCCTCGGCTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGNCGAAGGACGACGATGCCGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGNCGGTGGTGCCTTCCGCTCGGTTGCCTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGTTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGNGAGNAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCCCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGA                             ]


>consensus_13898#1 TTTTTTTTTACTGAAATTCGGTTATTCATTAGAACAAATCTGTCGTCTAGACCATAAAAC TTTTACCTGAGCCAATTATGCACCTGATATGTAATACACTCTCTCTTACTGAAATTTCAG AAGAGAACATAACATCAAATTCCTTTACTAATTACTTCTGCTCGTACATAATATTGCAAG CACGAAGTTTCCAGTGTCTTGCGGTGAGCATATAATCTCAAAACTTTCTTCATCTGTTTA ATCTGTTTCTTTAGTGTGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAA GCATTCTAGTGATTACTCTTTATATGTTTCATCCGCTTAATTAAATGATCTCTTTGACCT CTCTCTATATATTTCTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCAT GCAGTCGATTATTCGATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCA GAGTGCGGCGAGGCCGAGTAGTCGTTGGCCTTGAGGGCTTCAGATCCACAGTTGTCTGCA TGGTCGTCCATTAGCATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCC CTGTACATGTAGATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAAG AAGTCAGCCGCCGGCGCCGGCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTCG CCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGACG TGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCGA GCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGCC GCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGGC TCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGCC GCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGCCTTCCGCTCGGTTGCC TGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAGT TTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAGG AGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCCC CTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGTT TATGGAGAGAGAGAAGAGAGAAGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13898#0      CTGAAGAACAATGGTAGACAGGAACAGGTGTAGATGTTCCTTGCTGCCCCCTTATTGTAT 60
consensus_13898#1      ------------------------------------------------------------
                                                                                   

consensus_13898#0      CAGCATCACAGAAATGTGAAAGATAAAATAGCTTGTTTCCTATACTATGCCCACCTGAGA 120
consensus_13898#1      ------------------------------------------------------------
                                                                                   

consensus_13898#0      GGCGAGTTAATGCGTCCTGGTAGCTCATTTCCTTTATTTTACAGTGTGTGACTAAGAAGA 180
consensus_13898#1      ---------------------------TTTTTTTTTACTGAAATTCGGTTATTCATTAG- 32
                                                  ***  ***   * * * *  ** * * *  ** 

consensus_13898#0      TTAACATATCATGTTCTCGTTTTCATGTATAGGTGGTAACCATACAAGCTGTTGTTGAAG 240
consensus_13898#1      --AACAAATC-TGTCGTCTAGACCA--TAAAACTTTTACCTGAGCCAATTATGCACCTGA 87
                         **** *** ***  **     **  ** *  *  ** *    * *  * *        

consensus_13898#0      CATTTGCTAGTCTGCCTGATAATTCTATTGCCTTCAGAATTGATGATGACCACAAGTACG 300
consensus_13898#1      TATGTAATACACTCTCTCTTACTGAAATT----TCAGAAGAGAACATAACATCAAATTCC 143
                        ** *  **  **  **  ** *   ***    ******  **  ** **  *** * * 

consensus_13898#0      TCTTTAGATAATTTCCTCTCTGATGTGA-ATTGTGATGCTCAAGATGCAGAGAAGGCAGA 359
consensus_13898#1      TTTACTAATTACTTCTGCTCGTACATAATATTGCAA-GCACGAAGTTTCCAG----TGTC 198
                       * *    ** * ***  ***  *  * * ****  * ** * *  *    **        

consensus_13898#0      TTGTGCCAGACTCTCCTCTTCGGTCCATTCCAGGCTACTGTTTGCTGCTGATCGAGTGAA 419
consensus_13898#1      TTGCGGTGAGCATATAATCTCAAAACTTTCTTCATCTGTTTAATCTGTTTCTTTAGTG-- 256
                       *** *     *        **    * ***        * *   *** *  *  ****  

consensus_13898#0      TCAAATGGTGCTCAACGTGGTCTTGATATGGAGTGAATGGCCATAGAATCTAATT-CCAC 478
consensus_13898#1      TGAGAATCCTCTCCATTTTTTTTTATTCAAGCCACAGTTAAGAAGCATTCTAGTGATTAC 316
                       * * *     *** *  *  * **  *   *    * *    *   * **** *    **

consensus_13898#0      AGATGGCAAGATCACATCCAAGCTTCTCGTATTCCACCAAGAAACTATTCCTGGGAGCAA 538
consensus_13898#1      TCTTTATATG-TTTCATCCGC-TTAATTAAATGATCTCTTTGACCTCTCTCTATATATTT 374
                          *   * * *  *****    *  *   **     *    * ** *  **        

consensus_13898#0      ATTCTGTGC--CAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTC 596
consensus_13898#1      CTTTGCTGCTACAGAATTGAAGAGCAGCCTGACGGTGCTACATCATGCAGTCGATTATTC 434
                        **   ***  *************************************************

consensus_13898#0      GATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGC 656
consensus_13898#1      GATCGACTAGGCAGCTGCGACGCTGAGGGAGAAGGGCAATGGCGCAGAGTGCGGCGAGGC 494
                       ************************************************************

consensus_13898#0      CGAGTAGTCGTTGGCCTTGAGGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAG 716
consensus_13898#1      CGAGTAGTCGTTGGCCTTGAGGGCTTCAGATCCACAGTTGTCTGCATGGTCGTCCATTAG 554
                       ************************************************************

consensus_13898#0      CATCTGGTGGCACCTGTACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTACAGGTTTGAGA 776
consensus_13898#1      CATCTGGTGGCACCTGCACTCGGAGCTGCAGAAGGCTTTCTCCCCCCTGTA--------- 605
                       **************** *******************************  *         

consensus_13898#0      CATGCACAATGACATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAA 836
consensus_13898#1      CATGTAG------ATGTCGAGCCCATCAAGCCTCTTGTCACACAGGAAGCACCGGCTCAA 659
                       **** *       ***********************************************

consensus_13898#0      GAAGTCAGCCGCCGGCGCCGGCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTC 896
consensus_13898#1      GAAGTCAGCCGCCGGCGCCGGCTCCTCGTCGGCTTCCACAAGCCAGCCGCCGCCACCGTC 719
                       ************************************************************

consensus_13898#0      GCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGAC 956
consensus_13898#1      GCCGAACCCAAAGTACACCCGCTTCCTCACGCTGCCGCTGGCGCCATCGACGCCGGCGAC 779
                       ************************************************************

consensus_13898#0      GTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCG 1016
consensus_13898#1      GTGCGTGATGACGCAAGTGTAGCTCTCAGAGAGCTCGGCCTCCTCTCTCGCGCGGCGCCG 839
                       ************************************************************

consensus_13898#0      AGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGT--TCAGGCAGGCGTGGCTCATGGC 1074
consensus_13898#1      AGCCGCCGCGCCGATGGCGATCGGCTCGGCCTCGGTCGTCAGGCAGGCGTGGCTCATGGC 899
                       ************************************  **********************

consensus_13898#0      CGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGG 1134
consensus_13898#1      CGCGACGATGCCAAGCCCGACGCCGGTGGCGCCGCCGTCGAAGCTGCGCCTCGGCCTCGG 959
                       ************************************************************

consensus_13898#0      CTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGC 1194
consensus_13898#1      CTCGGGGGAGCTCACTGGCCCGAGGAAGGTGGAGAAGAGGTTGGCGAAGGACGACGATGC 1019
                       ************************************************************

consensus_13898#0      CGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCNGTGGTGCCTTCCGCTCGGTTGC 1254
consensus_13898#1      CGCCGTCAGCTTGGTGATGGAGCCGAGCCTCGCCGGCGGTGGTGCCTTCCGCTCGGTTGC 1079
                       ************************************* **********************

consensus_13898#0      CTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAG 1314
consensus_13898#1      CTGCTCAAGAAAGCTCATCGTGGAATACTAACTTTAGGTAAATTTCTTGTCCAAGTTCAG 1139
                       ************************************************************

consensus_13898#0      TTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAG 1374
consensus_13898#1      TTTTGATGAACACTAGCTAGTAATCGCTAAATTGTTCTTGTGTTCTAGAGAGAGAGAGAG 1199
                       ************************************************************

consensus_13898#0      NAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCC 1434
consensus_13898#1      GAGAGAGAGAGAGATGCTTTAGTTATGTAGTTGTTCTTCACTCTCTCATCTCTCCTCTCC 1259
                        ***********************************************************

consensus_13898#0      CCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGT 1494
consensus_13898#1      CCTTTGCAATTCTTGGAGCACTTGCTTTCTCACCGATTAAAAGAACACCAATGGTGAGGT 1319
                       ************************************************************

consensus_13898#0      TTATGGAGAGAGAGAAGAGAGAAGAGAGAGAGAGAGAGAGGAGGGAAGGAGAAGGTGGTG 1554
consensus_13898#1      TTATGGAGAGAGAGAAGAGAGAAGAG---------------------------------- 1345
                       **************************                                  

consensus_13898#0      GCAACATTTTAAAGGAGCAAATGGGTGAGTGGGAGCTGGGAATTTGGGTTTGTTAGGGAT 1614
consensus_13898#1      ------------------------------------------------------------
                                                                                   

consensus_13898#0      TAAATTATTTAGTGGTGTTGCACATGTGGGAGCTCTTTCTGTGGAGGTTTTTATTTCTTG 1674
consensus_13898#1      ------------------------------------------------------------
                                                                                   

consensus_13898#0      ATATTTAGTGGAGAATATTCCACAATATCGATTATTTATCTTATGAGAATCAAGGA 1730
consensus_13898#1      --------------------------------------------------------
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)