cluster # 1390

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Oryza sativa
cluster # 1390 cluster # 1390 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1390#0 length = 1572 sequences # 2
consensusID : consensus_1390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1572
fasta sequence
                              [TGTCGCCGCCGCCGCCGCCGCGGCGGCGGTGAAGCCGAAGCGCACGCGGAAGAGCGTCCCCCGCGAGTCCCCCTCCCAGCGCAGCTCCGTCTACCGCGGCGTCACCCGGCACCGGTGGACGGGGCGGTTCGAGGCGCACCTGTGGGACAAGAACAGCTGGAACGAGTCCCAGAACAAGAAGGGCAAGCAAGTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGGGCGTACGATCTGGCGGCATTGAAGTACTGGGGACCCGACACCATCCTCAACTTCCCGTTGTCTGCATATGAAGGTGAGTTGAAAGAAATGGAGGGGCAATCAAGGGAAGAGTATATTGGATCCCTAAGGAGGAAAAGCAGTGGGTTCTCAAGAGGAGTATCGAAGTACCGAGGCGTTGCAAGACACCATCACAATGGGAGATGGGAGGCCCGGATTGGCCGTGTTTTTGGCAACAAGTACCTCTATCTCGGTACTTACGCGACGCAGGAGGAGGCGGCAATGGCGTACGACATGGCGGCCATCGAGTATCGGGGCCTGAACGCCGTCACCAACTTCGACCTCAGCCGGTACATCAAGTGGCTCCGGCCCGGCGCCGACGGCGCGGGCGCTCCCCAGAATCCTCACCCCATGCTGGGTGCTCTGTCGGCGCAGGATCTCCCGGCGATCGACCTCGACGCCATGGCGTCGTCGTTCCAGCACGACGGCCATGGCGCCGCGGCGGCGGCGGCACAGCTGATCCCGGCAAGACATTCGCTCGGCCACACGCCGACAACGTCGGCGCTCAGCCTGCTGCTGCAGTCGCCCAAGTTCAAGGAGATGATCGAGCGGACGTCGGCGGCGGAGACCACCACCACCAGCAGCACAACCACCTCCTCCTCGTCCCCGTCGCCGCCGCAGGCGACCAAGGACGACGGCGCCTCGCCGCAGTGCAGCTTCCCGGAGGACATCCAGACCTACTTCGGCTGCGCCGCCGAGGACGGCGCCGCCGGCGCGGGATACGCCGACGTGGACGGCCTGTTCTTCGGCGACCTCGCCGCGTACGCGTCGCCGGCGTTCCACTTCGAGCTGGACTTGTGACGGCGGCGCCGCCGCTGCCGCAGCCGAGCAGTGTCAGCTTGTGCCTCGCCAGTAGCCCAACGGCCACGGCGC-AATACAGTTACAGGCCGTTAATTAAATTCTTTAATTGGGTGGATTTGGTCCATAGGAGAATGA-CCAA-AAAAAGAGAAGGAACAGACG-AACAGACAAATGGAAGGCAGGCAAGAATGCAAGATACTCTTATAGCACAAGCTAGTGCTTACAGAGTTAATGACAGTATTATAGTGACAAGCTGAAGACCGAGAATTACTTCAAGATTGATTTTCTTACCTTGACAATCCGAATGAGA-GAGAGAGAGATAGTGGGTGTGTGACAGTGTGAGGAGAGGAGATTGTTTCATTTTTGCTTCATCCCTGACAAAATGAACAACTATATAGTATC--TTTTTTTTTTGAGAACGACTATATAGTATCTATAATCTACATAAATACTTGATAGAAGGATTTGTGAGTTTCTGAACAAAAAA]

[+] EMBL AK111617             [TGTCGCCGCCGCCGCCGCCGCGGCGGCGGTGAAGCCGAAGCGCACGCGGAAGAGCGTCCCCCGCGAGTCCCCCTCCCAGCGCAGCTCCGTCTACCGCGGCGTCACCCGGCACCGGTGGACGGGGCGGTTCGAGGCGCACCTGTGGGACAAGAACAGCTGGAACGAGTCCCAGAACAAGAAGGGCAAGCAAGTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGGGCGTACGATCTGGCGGCATTGAAGTACTGGGGACCCGACACCATCCTCAACTTCCCGTTGTCTGCATATGAAGGTGAGTTGAAAGAAATGGAGGGGCAATCAAGGGAAGAGTATATTGGATCCCTAAGGAGGAAAAGCAGTGGGTTCTCAAGAGGAGTATCGAAGTACCGAGGCGTTGCAAGACACCATCACAATGGGAGATGGGAGGCCCGGATTGGCCGTGTTTTTGGCAACAAGTACCTCTATCTCGGTACTTACGCGACGCAGGAGGAGGCGGCAATGGCGTACGACATGGCGGCCATCGAGTATCGGGGCCTGAACGCCGTCACCAACTTCGACCTCAGCCGGTACATCAAGTGGCTCCGGCCCGGCGCCGACGGCGCGGGCGCTCCCCAGAATCCTCACCCCATGCTGGGTGCTCTGTCGGCGCAGGATCTCCCGGCGATCGACCTCGACGCCATGGCGTCGTCGTTCCAGCACGACGGCCATGGCGCCGCGGCGGCGGCGGCACAGCTGATCCCGGCAAGACATTCGCTCGGCCACACGCCGACAACGTCGGCGCTCAGCCTGCTGCTGCAGTCGCCCAAGTTCAAGGAGATGATCGAGCGGACGTCGGCGGCGGAGACCACCACCACCAGCAGCACAACCACCTCCTCCTCGTCCCCGTCGCCGCCGCAGGCGACCAAGGACGACGGCGCCTCGCCGCAGTGCAGCTTCCCGGAGGACATCCAGACCTACTTCGGCTGCGCCGCCGAGGACGGCGCCGCCGGCGCGGGATACGCCGACGTGGACGGCCTGTTCTTCGGCGACCTCGCCGCGTACGCGTCGCCGGCGTTCCACTTCGAGCTGGACTTGTGACGGCGGCGCCGCCGCTGCCGCAGCCGAGCAGTGTCAGCTTGTGCCTCGCCAGTAGCCCAACGGCCACGGCGC AATACAGTTACAGGCCGTTAATTAAATTCTTTAATTGGGTGGATTTGGTCCATAGGAGAATGA CCAA AAAAAGAGAAGGAACAGACG AACAGACAAATGGAAGGCAGGCAAGAATGCAAGATACTCTTATAGCACAAGCTAGTGCTTACAGAGTTAATGACAGTATTATAGTGACAAGCTGAAGACCGAGAATTACTTCAAGATTGATTTTCTTACCTTGACAATCCGAATGAGA GAGAGAGAGATAGTGGGTGTGTGACAGTGTGAGGAGAGGAGATTGTTTCATTTTTGCTTCATCCCTGACAAAATGAACAACTATATAGTATC  TTTTTTTTTTGAGAACGACTATATAGTATCTATAATCTACATAAATACTTGATAGAAGGATTTG                   ]
[+] EMBL BQ906318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCTGTTCTTCGGCGACCTCACCGCGTACGCGTCGCCGGCGTTCCACTTCGAGCTGGACTTGTGACGGCGGCGCCGCCGCTGCCGCAGCCGAGCAGTGTCAGCTTGTGCCTCGCCAGTAGCCCAACGGCCACGGCGCAAATACAGTTACAGGCCGTTAATTAAATTCTTTAATTGGGTGGATTTTGTCCATAGGAGAATGACCCAANAAAAAGAGAAGGAACAGACGTAACAGACAAATGGAAGGCAGGCAAGAATGCAAGATACTCTTATAGCACAAGCTAGTGCTTACAGAGTTAATGACAGTATTATAGTGACAAGCTGAAGACCGAGAATTACTTCAAGATTGATTTTCTTACCTNGACAATCCGAATGAGACGAGAGAGAGATAGTGGGTGTGTGACAGTGTGAGGAGAGGAGATTGTTTCATTTTTGCTTCATCCCTGAC AAATGAACAACTATATAGTATCTTTTTTTTTTTTGAGAACGACTATATAGTATCTATAATCTACATAAATACTTGATAGAAGGATTTGTGAGTTTCTGAACAAAAAA]




>consensus_1390#0
TGTCGCCGCCGCCGCCGCCGCGGCGGCGGTGAAGCCGAAGCGCACGCGGAAGAGCGTCCC
CCGCGAGTCCCCCTCCCAGCGCAGCTCCGTCTACCGCGGCGTCACCCGGCACCGGTGGAC
GGGGCGGTTCGAGGCGCACCTGTGGGACAAGAACAGCTGGAACGAGTCCCAGAACAAGAA
GGGCAAGCAAGTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGGGCGTACGA
TCTGGCGGCATTGAAGTACTGGGGACCCGACACCATCCTCAACTTCCCGTTGTCTGCATA
TGAAGGTGAGTTGAAAGAAATGGAGGGGCAATCAAGGGAAGAGTATATTGGATCCCTAAG
GAGGAAAAGCAGTGGGTTCTCAAGAGGAGTATCGAAGTACCGAGGCGTTGCAAGACACCA
TCACAATGGGAGATGGGAGGCCCGGATTGGCCGTGTTTTTGGCAACAAGTACCTCTATCT
CGGTACTTACGCGACGCAGGAGGAGGCGGCAATGGCGTACGACATGGCGGCCATCGAGTA
TCGGGGCCTGAACGCCGTCACCAACTTCGACCTCAGCCGGTACATCAAGTGGCTCCGGCC
CGGCGCCGACGGCGCGGGCGCTCCCCAGAATCCTCACCCCATGCTGGGTGCTCTGTCGGC
GCAGGATCTCCCGGCGATCGACCTCGACGCCATGGCGTCGTCGTTCCAGCACGACGGCCA
TGGCGCCGCGGCGGCGGCGGCACAGCTGATCCCGGCAAGACATTCGCTCGGCCACACGCC
GACAACGTCGGCGCTCAGCCTGCTGCTGCAGTCGCCCAAGTTCAAGGAGATGATCGAGCG
GACGTCGGCGGCGGAGACCACCACCACCAGCAGCACAACCACCTCCTCCTCGTCCCCGTC
GCCGCCGCAGGCGACCAAGGACGACGGCGCCTCGCCGCAGTGCAGCTTCCCGGAGGACAT
CCAGACCTACTTCGGCTGCGCCGCCGAGGACGGCGCCGCCGGCGCGGGATACGCCGACGT
GGACGGCCTGTTCTTCGGCGACCTCGCCGCGTACGCGTCGCCGGCGTTCCACTTCGAGCT
GGACTTGTGACGGCGGCGCCGCCGCTGCCGCAGCCGAGCAGTGTCAGCTTGTGCCTCGCC
AGTAGCCCAACGGCCACGGCGCAATACAGTTACAGGCCGTTAATTAAATTCTTTAATTGG
GTGGATTTGGTCCATAGGAGAATGACCAAAAAAAGAGAAGGAACAGACGAACAGACAAAT
GGAAGGCAGGCAAGAATGCAAGATACTCTTATAGCACAAGCTAGTGCTTACAGAGTTAAT
GACAGTATTATAGTGACAAGCTGAAGACCGAGAATTACTTCAAGATTGATTTTCTTACCT
TGACAATCCGAATGAGAGAGAGAGAGATAGTGGGTGTGTGACAGTGTGAGGAGAGGAGAT
TGTTTCATTTTTGCTTCATCCCTGACAAAATGAACAACTATATAGTATCTTTTTTTTTTG
AGAACGACTATATAGTATCTATAATCTACATAAATACTTGATAGAAGGATTTGTGAGTTT
CTGAACAAAAAA
clustalw multiple alignements is not computed in this case