These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13925#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1558 fasta sequence [GGCATCCTCCTCCTCCTCGGCGACCGGAGACCGAGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCTCCCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAA-TGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTC-TGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCGCCACTATTCCTCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGA-GAAAGCCAAAGCTGGAGACGAATCTTGTCAGAGGAGCACCTCCCCTTGAAATCCT-GGAAAAATGTGAGTTTCTAGAGCCTCTATCAGAAAAGGCGCTGGACGATTACCAATGGCTGATAACGAGAATGCAGAGACCAAATCGTGGTCTGTTTGGAAATTTGTTGCAAAATATATCGAGTGTACTGAATTTCAAATCAAGAGTTTAAGAATTTCTGTGCAAAAAAAACCCTTAAAAGGAAA] [+] EMBL CB655663 [GGCATCCTCCTCCTCCTCGGCGACCGGAGACCGAGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCTCCCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACC ] [+] EMBL CB684993 [ ccgcctttACGCCACCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCA ] [+] EMBL AK120467 [ TCCTGAGTTCAGGACAAACCTTGATGTGCTCTACCCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAA TGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTC TGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCGCCACTATTCCTCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGA GAAAGCCAAAGCTGGAGACGAATCTTGTCAGAGGAGCACCTCCCCTTGAAATCCT GGAAAAATGTGAGTTTCTAGAGCCTCTATCAGAAAAGGCGCTGGACGATTACCAATGGCTGATAACGAGAATGCAGAGACCAAATCGTGGTCTGTTTGGAAATTTGTTGCAAAATATATCGAGTGTACTGAATTTCAAATCAAGAGTTTAAGA ] [-] EMBL CB655664 [ AACCTGAATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAA TGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTC TGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCG ] [-] EMBL CB684994 [ TGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAA TGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTC TGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCGCCACTATTCCTCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGA GAAAGCCAAAGCTGGAGACGAATCTTGTCAGAGGAGCCCCTCCCCTTGAAATCCT GGAAAAATGTGAGTTTCTAGAGCCTCTATCAGAAAAGGCGCTGGACGATTACCAATGGCTGATAACGAGAATGCAGAGACCAAATCGTGGTCTGTTTGGAAATTTGTTGCAAAATATATCGAGTGTACTGAATTTCAAAGCAAGAGTTTAAGAATTTCTGTGCAAAAAAAACCCTTAAAAGGAAA] [+] EMBL OSS13782A [ TTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAG GAANTGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTTGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCGCCACTATTCCTCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGGAACAAGAGGAAAGCCAAAGCTGGAGACGGATCTTGTCAGAGGAGNACCTTCCCTTGGAATCCTGGGAAAAATGTGAGTTT TAGAGC ] consensusID : consensus_13925#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1466 fasta sequence [GAGGGGAAGCCCCTCCTCTTCCCCCACCCTCGCATCCCCGTCGCGGCCCTCGTCCCCAACCACCTTCCCCGCCGCCCTCGCGCTTCCGGCATCCTCCTCCTCCTCGGCGACCGGAGACCGAGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCCACCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTG-CTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCAGCGCCATCATTCCTCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGAGAAAGCCAAAGCTGGNNNNNNATCTTGTCANNNNNNCACCTCNCNNNGAAATCCTNNNNNNATGTNNNNNTCTNN] [+] EMBL CB648137 [GAGGGGAAGCCCCTCCTCTTCCCCCACCCTCGCATCCCCGTCGCGGCCCTCGTCCCCAACCACCTTCCCCGCCGCCCTCGCGCTTCCGGCATCCTCCTCCTCCTCGGCGACCGGAGACCGAGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCCACCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGAACCGCAATGGTGAGGTAGATCCTAATGGCT ] [+] EMBL CB675759 [ AGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGG ] [-] EMBL CB675760 [ TGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCNTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTG CTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCAGCG ] [-] EMBL CB665448 [ AATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATCGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCATAAGTAACAGATGGAAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCGTGAAGCATCTGGGATCTTCATACAACAGTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTATTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGGGAAGGGAATGTCTGACGTTTCAGTGGTGGTTCCCAAGTCAGGCAGTAGTGTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGAGAGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTGAGTAGAAGCTTACCCTTTCGTCAAGATGTCATCCCAGGAAAAGGGCCATC ] [-] EMBL CB648138 [ GCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTG GTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGaatgg ] [+] EMBL CF195915 [ GGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTG CTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCGCCACTATTCCTCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGAGAAAGCCAAAGCTGGNNNNNNATCTTGTCANNNNNNCACCTCNCNNNGAAATCCTNNNNNNATGTNNNNNTCTNN] consensusID : consensus_13925#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1464 fasta sequence [CCCTCGCATCCCCGTCGCGGCCCTCGTCCCCAACCACCTTCCCCGCCGCCCTCGCGCTTCCGGCATCCTCCTCCTCCTCGGCGACCGGAGACCGAGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCCACCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGTTAGAGTCAAAAGTTGAAGCCATTTTTCTCTAAATTCTGATAGCCTTGGATGTTACGAAAGCTAATGCTTAGGTGTGGAGAACTTAATGCAGAGGGCTCTAAGCTCTGATATCTATTTTTCATTATAGTCTACCAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCG] [+] EMBL CB619994 [CCCTCGCATCCCCGTCGCGGCCCTCGTCCCCAACCACCTTCCCCGCCGCCCTCGCGCTTCCGGCATCCTCCTCCTCCTCGGCGACCGGAGACCGAGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCCACCAGGCCGAGACCGCGCCGCCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGGCTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCCTGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGACGACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTCTCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGATTTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGATGTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCAATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGATTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGTTAGAGTCAAAAGTTGAAGCCATTTTTCTCTAAATTCTGATAGCCTTGGATGTTACGAAAGCTAATGCTTAGGTGTGGAGAACTTAATGCAGAGGGC ] [-] EMBL CB619995 [ GAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGATGGAAGGTTAGAGTCAAAAGTTGAAGCCATTTTTCTCTAAATTCTGATAGCCTTGGATGTTACGAAGGCTAATGCTTAGGTGTGGAGAACTTAATGCAGAGGGCTCTAAGCTCTGATATCTATTTTTCATTATAGTCTACCAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATCCTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGCCTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCCTGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTAGGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCACGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTGATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCAGTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAATTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGCAGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13925#0 ------------------------------------------------------------ consensus_13925#1 GAGGGGAAGCCCCTCCTCTTCCCCCACCCTCGCATCCCCGTCGCGGCCCTCGTCCCCAAC 60 consensus_13925#2 --------------------------CCCTCGCATCCCCGTCGCGGCCCTCGTCCCCAAC 34 consensus_13925#0 ---------------------------GGCATCCTCCTCCTCCTCGGCGACCGGAGACCG 33 consensus_13925#1 CACCTTCCCCGCCGCCCTCGCGCTTCCGGCATCCTCCTCCTCCTCGGCGACCGGAGACCG 120 consensus_13925#2 CACCTTCCCCGCCGCCCTCGCGCTTCCGGCATCCTCCTCCTCCTCGGCGACCGGAGACCG 94 ********************************* consensus_13925#0 AGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCTCCCAGGCCGAGACCGCGCCG 93 consensus_13925#1 AGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCCACCAGGCCGAGACCGCGCCG 180 consensus_13925#2 AGGCAGCTCGGCGTCGCCCTGCGGCGTCGGCCAAGACGCCACCAGGCCGAGACCGCGCCG 154 *************************************** ******************* consensus_13925#0 CCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGG 153 consensus_13925#1 CCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGG 240 consensus_13925#2 CCCAGCCGCCGCGGCGGCGGAGGCTGCTGGGGGCGGTGGGCGGCACGCGCCGCGGCGGGG 214 ************************************************************ consensus_13925#0 CTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCC 213 consensus_13925#1 CTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCC 300 consensus_13925#2 CTGGTGCTCCATCTGGCGGTATGCTCCGTCGCCTTGCTCTTCCCCACCTATGCGCGCGCC 274 ************************************************************ consensus_13925#0 TGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGAC 273 consensus_13925#1 TGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGAC 360 consensus_13925#2 TGCGTGGGCGGCGCTCTCCCCCCGCCACCTCCTGCGGCGGCGATGGCGGCGGAGGAGGAC 334 ************************************************************ consensus_13925#0 GACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTC 333 consensus_13925#1 GACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTC 420 consensus_13925#2 GACGACGACGAGGAGTGGAAGGTCGCGCTGCAGCAGTGGAAGTCCAAGACGTATTCCCTC 394 ************************************************************ consensus_13925#0 TCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGAT 393 consensus_13925#1 TCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGAT 480 consensus_13925#2 TCTGTTCCCCTGCGGGTCGTCGCGCTCCGTGGCTCCTTCCCTCCTGCGTGGATCAAGGAT 454 ************************************************************ consensus_13925#0 TTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGAT 453 consensus_13925#1 TTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGAT 540 consensus_13925#2 TTTGTTGAAGCTCAGGGGAAGAGACTGAAATTCAGTCCTGAGTTCAGGACAAACCTTGAT 514 ************************************************************ consensus_13925#0 GTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCA 513 consensus_13925#1 GTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCA 600 consensus_13925#2 GTGCTCTACTCCGAGATGTCACAATGTTTGGACAAGGGTCAACTTAAGCAAAAATCCGCA 574 ************************************************************ consensus_13925#0 ATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGA 573 consensus_13925#1 ATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGA 660 consensus_13925#2 ATGGCGGCTGATGTTGTTTCAATTGGGGACTCTTGGCTCGGGTATGCCATTCGTAAGGGA 634 ************************************************************ consensus_13925#0 TTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGA 633 consensus_13925#1 TTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGA 720 consensus_13925#2 TTGGTAGAACCTGTCAAGAACGCTGAAGAACAGGATTGGTTTCAGAGCCTAAGTAACAGA 694 ************************************************************ consensus_13925#0 TGGAAGATT--------------------------------------------------- 642 consensus_13925#1 TGGAAG------------------------------------------------------ 726 consensus_13925#2 TGGAAGGTTAGAGTCAAAAGTTGAAGCCATTTTTCTCTAAATTCTGATAGCCTTGGATGT 754 ****** consensus_13925#0 ------------------------------------------------------------ consensus_13925#1 ------------------------------------------------------------ consensus_13925#2 TACGAAAGCTAATGCTTAGGTGTGGAGAACTTAATGCAGAGGGCTCTAAGCTCTGATATC 814 consensus_13925#0 --------------------------CATCTGTGCAGGAACCGCAATGGTGAGGTAGATC 676 consensus_13925#1 -------------------------------------GAACCGCAATGGTGAGGTAGATC 749 consensus_13925#2 TATTTTTCATTATAGTCTACCAGATTCATCTGTGCAGGAACCGCAATGGTGAGGTAGATC 874 *********************** consensus_13925#0 CTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGA 736 consensus_13925#1 CTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGA 809 consensus_13925#2 CTAATGGCTCAATATGGGCGGTTCCATACAGATGGGGCACCGTGGTCATTGCTTACAAGA 934 ************************************************************ consensus_13925#0 AAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGC 796 consensus_13925#1 AAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGC 869 consensus_13925#2 AAAACAAGTTCAAAAGGCATAATCTGAAACCGATACAGGACTGGGGGGATTTGTGGAGGC 994 ************************************************************ consensus_13925#0 CTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCC 856 consensus_13925#1 CTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCC 929 consensus_13925#2 CTGAACTTGCCGGAAAAATTTCAATGGTGGATTCTCCAAGAGAAGTCATTGGTGCAGTCC 1054 ************************************************************ consensus_13925#0 TGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTA 916 consensus_13925#1 TGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTA 989 consensus_13925#2 TGAAGCATCTGGGATCCTCATACAACACTAATGACATGGAATCAGAAATCACTGGTGGTA 1114 ************************************************************ consensus_13925#0 GGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCA 976 consensus_13925#1 GGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCA 1049 consensus_13925#2 GGGAAACAGTCTTAGAAAGCTTGACACAACTACAGAACCAGGTTCAATTGTTTGACAGCA 1174 ************************************************************ consensus_13925#0 CGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTG 1036 consensus_13925#1 CGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTG 1109 consensus_13925#2 CGAACTATCTGAAATCATTTGGAGTAGGAGATGTATGGGTTGCAGTGGGTTGGAGCAGTG 1234 ************************************************************ consensus_13925#0 ATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCA 1096 consensus_13925#1 ATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCA 1169 consensus_13925#2 ATGTTATTCCTGCTGCGAAGCGAATGTCTGACGTTGCAGTGGTGGTTCCCAAGTCAGGCA 1294 ************************************************************ consensus_13925#0 GTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAA 1156 consensus_13925#1 GTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAA 1229 consensus_13925#2 GTAGTCTATGGGCTGATCTATGGGCGATACCATCTGCAACCAAATTTCAGACTGATCGAA 1354 ************************************************************ consensus_13925#0 TTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGC 1216 consensus_13925#1 TTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGC 1289 consensus_13925#2 TTGGCGGCAGAACTAGAGGCCCATCTCCACTTATCAACCAGTGGTTTGACTTCTGCCTGC 1414 ************************************************************ consensus_13925#0 AGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCGCCACTATTCC 1276 consensus_13925#1 AGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCAGCGCCATCATTCC 1349 consensus_13925#2 AGAGTGCTAGAAGCTTACCCTTTCGGCAAGATGTCATCCCAGGAGCATCG---------- 1464 *********************************************** ** consensus_13925#0 TCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGAGAAAGCCAAAGCTGGAGA 1336 consensus_13925#1 TCGAGAAACCGGTGCCTGAAGTTCCTCAAGAACGAAACAAGAGAAAGCCAAAGCTGGNNN 1409 consensus_13925#2 ------------------------------------------------------------ consensus_13925#0 CGAATCTTGTCAGAGGAGCACCTCCCCTTGAAATCCTGGAAAAATGTGAGTTTCTAGAGC 1396 consensus_13925#1 NNNATCTTGTCANNNNNNCACCTCNCNNNGAAATCCTNNNNNNATGTNNNNNTCTNN--- 1466 consensus_13925#2 ------------------------------------------------------------ consensus_13925#0 CTCTATCAGAAAAGGCGCTGGACGATTACCAATGGCTGATAACGAGAATGCAGAGACCAA 1456 consensus_13925#1 ------------------------------------------------------------ consensus_13925#2 ------------------------------------------------------------ consensus_13925#0 ATCGTGGTCTGTTTGGAAATTTGTTGCAAAATATATCGAGTGTACTGAATTTCAAATCAA 1516 consensus_13925#1 ------------------------------------------------------------ consensus_13925#2 ------------------------------------------------------------ consensus_13925#0 GAGTTTAAGAATTTCTGTGCAAAAAAAACCCTTAAAAGGAAA 1558 consensus_13925#1 ------------------------------------------ consensus_13925#2 ------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||