These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13931#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 3670 fasta sequence [GAAAAAAAATACGAAAAGCAAAAAGGAATAAACGGAGGGGGCTAAACACCAAAATTCCCCCTCTCCTTCTCCTTCCCCTCCTCCCGAAACCCTCGCCGCCGTCGCTGTCGAAACCCTCGCTGCTGCTGCTGCCGCACGGCGCGGCGGGGTACCGGGTCCCCCTCCCTGCGGCGGCGCGGAGGGGTAGGTCTCCCCCCCCTCGCTGCGGCGTGGCGGTGGGGGGTGCGGTGCCGGCTGCCGCGCCATGATCTTGCGCCGGTGGACTGCGCCTATCCAATAAAAAAAAAAGATAAAGATAGAACAAGTAGGTTACTTTCCGTACCATGGGGCGACCGGGGATGGACTCCAGCGAAGGGAGGGAGAGCAATGGCGTTGTTCCTGAACGTAATGGTGGTGCTGTCCCTGCAAAACAGCAGTTGGACGGGAAGGACACCTTGCGGTACGCCAACATCCTCCGCTCCCGCAACAAATTTGCCGAAGCACTCCAGTTGTACAATAATGTCCTTGAGAAGGATGAAGCCAATGTGGAGGCCCTTATTGGCAAAGGGATTTGCCTCCAGGCACAGAGCCTACCTATGCAGGCCATCGAGTGCTTCAACGAGGCCGTCAGGATCGACCCAGGGAATGCATGTGCTCTCACTTATTGTGGGATGATATACAAAGATGAGGGTCACTTAGTTGAAGCTGCAGAGGCTTATCAAAAAGCTCGAAATGCAGATCCTTCCTACAAACCTGCTGCAGAGTTTCTTGCTATTGTGTTGACCGATCTTGGAACTAGCTTGAAGCTTGCAGGTAATACAGAGGAGGGGATTCAAAAATATTGTGAAGCTTTGGAAGTTGACAGCCACTATGCGCCTGCTTATTACAACCTTGGTGTGGTTTACTCGGAGATGATGCAATTTGATTTGGCTCTTACTTGTTACGAGAAAGCTGCTTTGGAGAGGCCATTGTATGCTGAAGCTTATTGCAACATGGGAGTTATTTACAAGAATCGTGGAGAATTAGAAGCAGCAATTGCCTGCTACGAGAGGTGCTTGACTATTTCCCCAAATTTTGAGATTGCCAAGAATAACATGGCAATAGCACTAACCGACTTGGGTACAAAGGTAAAAATTGAGGGTGACATTAATCAAGGTGTGGCATATTACAAGAAAGCTCTGTTCTACAATTGGCACTACGCTGATGCCATGTATAATCTTGGTGTCGCATATGGTGAAATGTTGAATTTTGAGATGGCTATTGTTTTTTACGAGCTTGCTCTGCACTTCAATCCTCGCTGTGCGGAGGCATGCAACAACCTGGGAGTAATATACAAGGACAGGGATAATCTTGACAAAGCTGTTGAATGTTATCAAATGGCCTTGTCAATTAAGCCAAATTTCTCTCAGTCATTGAATAACCTTGGAGTTGTCTACACTGTCCAGGGAAAGATGGATGCTGCTTCAAGCATGATTCAGAAGGCCATATTTGCAAATTCCACGTATGC-TGAAGCATATAATAACTTGGGTGTTCTTTACAGAGATGCAGGAAGTATTACTTCAGCCGTACAAGCTTATGAGAAATGCCTTCAAATTGAT-CCTGATTCACGAAATGCTGGTCAGAATCGTTTGCTTGCGTTGAATTATATTGATGAGGGCTTTGACGACAAGCTTTATCAAGCTCACAGGGAGTGGGGAAAACGCTTCCTGAAATTGTATCCACAGTATACTAGTTGGGATAACCCAAAAGTCGCTGATCGTCCTCTGGTCATTGGCTATGTGTCTCCTGATTACTTTACTCACTCTGTGTCATACTTCATTGAAGCTCCCCTTGCACACCATGACTACTCAAATTACAAGGTGGTTGTGTATTCTGGTGTTGTGAAGGCAGATGCCAAGACCCTTCGATTCAAGGATAAGGTATTAAAAAAGGGTGGGTTGTGGAGAGATATATATGGTATTGATGAAAAGAAGGTTGCTAGCTTGGTAAGAGAGGACAAAGTGGATATACTTGTGGAACTTACTGGTCATACGGCAAATAACAAGTTAGGAACAATGGCATGCAGGCCTGCTCCTATTCAGGTTACATGGATTGGCTACCCTAATACAACAGGTCTGCCAACAATTGACTACAGAATAACAGATTCATTGGCTGACCCACCTGATACAACCCAAAAGCATGTTGAAGAGTTGGTGCGCCTTCCTGAAAGCTTTCTTTGTTACAGTCCTTCCCCAGAAGCTGGGCCAGTTTGTCCCACTCCAGCAATTTTAAATGGTTTCATCACGTTTGGGAGTTTTAATAATCTAGCAAAGATTACACCAAAAGTATTGCAAGTTTGGGCCAAAATTTTGTGTGCAGTCCCTAACTCCCGTCTTGTGGTTAAGTGTAAGCCATTCTGCTGCGACAGTATTAGACAGAAATTCCTATCAACACTAGCAGAATTGGGTTTGGAGCCGTTACGAGTTGACTTGCTGCCACTCATCCATCTCAACCATGATCACATGCAAGCATATTCCCTAATGGACATAAGCCTGGATACGTTTCCATATGCTGGAACTACTACTACATGTGAATCTCTATACATGGGGGTTCCATGTGTTACTATGGCTGGCTCAGTCCATGCTCATAATGNTGGTGTTAGTCTACTCACTAAAGTTGGGCTGGGGAGGCTGGTTGCGAAGTCTGAGAATGAATATGTTAGCTTAGCATTGGATTTAGCGGCAGATGTTACTGCCTTGCAAGAACTGAGAATGAGCCTCCGAGGGCTGATGGCGAAATCACCAGTGTGTGATGGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGCGCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGCCATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATCTGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGCATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAG-AAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGGAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAATTGACGGCGGCATTTCAACAGGCTGTGTCATGATGTACATCTTCTAGTTCTGTGAGCCTGTTATTTCTTTCTACAGTCGCCATAGTATGCTTGATAGAAAAATGGTGCTCTTTTATCCCCTTTGTCAAAAATCAGGTTATTATCTACACGCATCAAGTCAAATTCTC] [+] EMBL AK065854 [GAAAAAAAATACGAAAAGCAAAAAGGAATAAACGGAGGGGGCTAAACACCAAAATTCCCCCTCTCCTTCTCCTTCCCCTCCTCCCGAAACCCTCGCCGCCGTCGCTGTCGAAACCCTCGCTGCTGCTGCTGCCGCACGGCGCGGCGGGGTACCGGGTCCCCCTCCCTGCGGCGGCGCGGAGGGGTAGGTCTCCCCCCCCTCGCTGCGGCGTGGCGGTGGGGGGTGCGGTGCCGGCTGCCGCGCCATGATCTTGCGCCGGTGGACTGCGCCTATCCAATAAAAAAAAAAGATAAAGATAGAACAAGTAGGTTACTTTCCGTACCATGGGGCGACCGGGGATGGACTCCAGCGAAGGGAGGGAGAGCAATGGCGTTGTTCCTGAACGTAATGGTGGTGCTGTCCCTGCAAAACAGCAGTTGGACGGGAAGGACACCTTGCGGTACGCCAACATCCTCCGCTCCCGCAACAAATTTGCCGAAGCACTCCAGTTGTACAATAATGTCCTTGAGAAGGATGAAGCCAATGTGGAGGCCCTTATTGGCAAAGGGATTTGCCTCCAGGCACAGAGCCTACCTATGCAGGCCATCGAGTGCTTCAACGAGGCCGTCAGGATCGACCCAGGGAATGCATGTGCTCTCACTTATTGTGGGATGATATACAAAGATGAGGGTCACTTAGTTGAAGCTGCAGAGGCTTATCAAAAAGCTCGAAATGCAGATCCTTCCTACAAACCTGCTGCAGAGTTTCTTGCTATTGTGTTGACCGATCTTGGAACTAGCTTGAAGCTTGCAGGTAATACAGAGGAGGGGATTCAAAAATATTGTGAAGCTTTGGAAGTTGACAGCCACTATGCGCCTGCTTATTACAACCTTGGTGTGGTTTACTCGGAGATGATGCAATTTGATTTGGCTCTTACTTGTTACGAGAAAGCTGCTTTGGAGAGGCCATTGTATGCTGAAGCTTATTGCAACATGGGAGTTATTTACAAGAATCGTGGAGAATTAGAAGCAGCAATTGCCTGCTACGAGAGGTGCTTGACTATTTCCCCAAATTTTGAGATTGCCAAGAATAACATGGCAATAGCACTAACCGACTTGGGTACAAAGGTAAAAATTGAGGGTGACATTAATCAAGGTGTGGCATATTACAAGAAAGCTCTGTTCTACAATTGGCACTACGCTGATGCCATGTATAATCTTGGTGTCGCATATGGTGAAATGTTGAATTTTGAGATGGCTATTGTTTTTTACGAGCTTGCTCTGCACTTCAATCCTCGCTGTGCGGAGGCATGCAACAACCTGGGAGTAATATACAAGGACAGGGATAATCTTGACAAAGCTGTTGAATGTTATCAAATGGCCTTGTCAATTAAGCCAAATTTCTCTCAGTCATTGAATAACCTTGGAGTTGTCTACACTGTCCAGGGAAAGATGGATGCTGCTTCAAGCATGATTCAGAAGGCCATATTTGCAAATTCCACGTATGC TGAAGCATATAATAACTTGGGTGTTCTTTACAGAGATGCAGGAAGTATTACTTCAGCCGTACAAGCTTATGAGAAATGCCTTCAAATTGAT CCTGATTCACGAAATGCTGGTCAGAATCGTTTGCTTGCGTTGAATTATATTGATGAGGGCTTTGACGACAAGCTTTATCAAGCTCACAGGGAGTGGGGAAAACGCTTCCTGAAATTGTATCCACAGTATACTAGTTGGGATAACCCAAAAGTCGCTGATCGTCCTCTGGTCATTGGCTATGTGTCTCCTGATTACTTTACTCACTCTGTGTCATACTTCATTGAAGCTCCCCTTGCACACCATGACTACTCAAATTACAAGGTGGTTGTGTATTCTGGTGTTGTGAAGGCAGATGCCAAGACCCTTCGATTCAAGGATAAGGTATTAAAAAAGGGTGGGTTGTGGAGAGATATATATGGTATTGATGAAAAGAAGGTTGCTAGCTTGGTAAGAGAGGACAAAGTGGATATACTTGTGGAACTTACTGGTCATACGGCAAATAACAAGTTAGGAACAATGGCATGCAGGCCTGCTCCTATTCAGGTTACATGGATTGGCTACCCTAATACAACAGGTCTGCCAACAATTGACTACAGAATAACAGATTCATTGGCTGACCCACCTGATACAACCCAAAAGCATGTTGAAGAGTTGGTGCGCCTTCCTGAAAGCTTTCTTTGTTACAGTCCTTCCCCAGAAGCTGGGCCAGTTTGTCCCACTCCAGCAATTTTAAATGGTTTCATCACGTTTGGGAGTTTTAATAATCTAGCAAAGATTACACCAAAAGTATTGCAAGTTTGGGCCAAAATTTTGTGTGCAGTCCCTAACTCCCGTCTTGTGGTTAAGTGTAAGCCATTCTGCTGCGACAGTATTAGACAGAAATTCCTATCAACACTAGCAGAATTGGGTTTGGAGCCGTTACGAGTTGACTTGCTGCCACTCATCCATCTCAACCATGATCACATGCAAGCATATTCCCTAATGGACATAAGCCTGGATACGTTTCCATATGCTGGAACTACTACTACATGTGAATCTCTATACATGGGGGTTCCATGTGTTACTATGGCTGGCTCAGTCCATGCTCATAATGTTGGTGTTAGTCTACTCACTAAAGTTGGGCTGGGGAGGCTGGTTGCGAAGTCTGAGAATGAATATGTTAGCTTAGCATTGGATTTAGCGGCAGATGTTACTGCCTTGCAAGAACTGAGAATGAGCCTCCGAGGGCTGATGGCGAAATCACCAGTGTGTGATGGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGCGCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGCCATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATCTGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGCATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAG AAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGGAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAATTGACGGCGGCATTTCAACAGGCTG ] [+] EMBL CB676629 [ TGTTCCTGAACGTAATGGTGGTGCTGTCCCTGCAAAACAGCAGTTGGACGGGAAGGACACCTTGCGGTACGCCAACATCCTCCGCTCCCGCAACAAATTTGCCGAAGCACTCCAGTTGTACAATAATGTCCTTGAGAAGGATGAAGCCAATGTGGAGGCCCTTATTGGCAAAGGGATTTGCCTCCAGGCACAGAGCCTACCTATGCAGGCCATCGAGTGCTTCAACGAGGCCGTCAGGATCGACCCAGGGAATGCATGTGCTCTCACTTATTGTGGGATGATATACAAAGATGAGGGTCACTTAGTTGAAGCTGCAGAGGCTTATCAAAAAGCTCGAAATGCAGATCCTTCCTACAAACCTGCTGCAGAGTTTCTTGCTATTGTGTTGACCGATCTTGGAACTAGCTTGAAGCTTGCAGGTAATACAGAGGAGGGGATTCAAAAATATTGTGAAGCTTTGGAAGTTGACAGCCACTATGCGCCTGCTTATTACAACCTTGGTGTGGTTTACTCGGAGATGATGCAATTTGATTTGGCTCTTACTTGTTACGAGAAAGCTGCTTTGGAGAGGCCATTGTATGCTGAAGCTTATTGCAACATGGGAGTTATTTACAAGAATCGTGGAGAATTAGAAGCAGCAATTGCCTGCTACGAGAGGTGCTTGACTATTTCCCCAAATTTTGAGATTGCCAAGAATAACATGGCAATAGCACTAACCGACTTGGGTACAAAGGTAAAAATTGAGGGTGACATTAATCAAGGTGTGGCATATTACAAGAAAGCTCTGTTCTACAATTGGCACTACGCTGATGCCATG ] [+] EMBL CF307017 [ TGCTCTCACTTATTGTGGGATGATATACAAAGATGAGGGTCACTTAGTTGAAGCTGCAGAGGCTTATCAAAAAGCTCGAAATGCAGATCCTTCCTACAAACCTGCTGCAGAGTTTCTTGCTATTGTGTTGACCGATCTTGGAACTAGCTTGAAGCTTGCAGGTAATACAGAGGAGGGGATTCAAAAATATTGTGAAGCTTTGGAAGTTGACAGCCACTATGCGCCTGCTTATTACAACCTTGGTGTGGTTTACTCGGAGATGATGCAATTTGATTTGGCTCTTACTTGTTACGAGAAAGCTGCTTTGGAGAGGCCATTGTATGCTGAAGCTTATTGCAACATGGGAGTTATTTACAAGAATCGTGGAGAATTAGAAGCAGCAATTGCCTGCTACGAGAGGTGCTTGACTATTTCCCCAAATTTTGAGATTGCCAAGAATAACATGGCAATAGCACTAACCGACTTGGGTACAAAGGTAAAAATTGAGGGTGACATTAATCAAGGTGTGGCATATTACAAGAAAGCTCTGTTCTACAATTGGCACTACGCTGATGCCATGTATAATCTTGGTGTCGCATATGGTGAAATGTTGAATTTTGAGATGGCTATTGTTTTTTACGAGCTTGCTCT ] [-] EMBL CB238407 [ CCTTCCTACAAACCTGCTGCAGAGTTTCTTGCTATTGTGTTGACCGATCTTGGAACTAGCTTGAAGCTTGCAGGTAATACAGAGGAGGGGATTCAAAAATATTGTGAAGCTTTGGAAGTTGACAGCCACTATGCGCCTGCTTATTACAACCTTGGTGTGGTTTACTCGGAGATGATGCAATTTGATTTGGCTCTTACTTGTTACGAGAAAGCTGCTTTGGAGAGGCCATTGTATGCTGAAGCTTATTGCAACATGGGAGTTATTTACAAGAATCGTGGAGAATTAGAAGCAGC ATTGCCTGCTACGAGAGGTGCTTGACTATTTCCCC AATTTTGAGATTGCC AGAATAACATGGC ATAGCACTAACCGACTTGGGTAC AAGGTAAAAATTGAGG ] [+] EMBL C73901 [ TGAAATGTTGAATTTTGAGATGGCTATTGTTTTTTACGAGCTTGCTCTGCACTTCAATCCTCGCTGTGCGGAGGCATGCAACAACCTGGGAGTAATATACAAGGACAGGGATAATCTTGACAAAGCTGTTGAATGTTATCAAATGGCCTTGTCAATTAAGCCAAATTTCTCTCAGTCATTGAATAACCTTGGAGTTGTCTACACTGTCCAGGGAAAGATAGATGCTGCTTCAAGCATGATTCAGAAGGCCATATTTGCAAATTCCACGTATGCTTGAAGCATATAATAACTTGGGTGTTCTTTACAGAGATGCAGGAAGTATTACTTCAGCCGTACAAGCTTATGAGAAATGCCTTCAAATTGATCCCTGATTCACGGAATGCTGGTCAGAATCGTTTGCTTGCGTTG ATTATATTGATGAGGGCTTTG CGNCAAGC TTATC ] [+] EMBL C26602 [ CTTCAGCCGTACAAGCTTATGAGAAATGCCTTCAAATTGAT CCTGATTCACGAAATGCTGGNCAGAATCGTTTGCTTGCGTTGAATTATATTGATGAGGGCTTTGACGACAAGCTTTATCAAGCTCACAGGGAGTGGGGAAAACGCTTCCTGAAATTGTATCCACAGTATACTAGTTGGGATAACCCAAAAGTCGCTGATCGTCCTCTGGTCATTGGCTATGTGTCT ] [+] EMBL CB673990 [ CATTGAAGCTCCCCTTGCACACCATGACTACTCAAATTACAAGGTGGTTGTGTATTCTGGTGTTGTGAAGGCAGATGCCAAGACCCTTCGATTCAAGGATAAGGTATTAAAAAAGGGTGGGTTGTGGAGAGATATATATGGTATTGATGAAAAGAAGGTTGCTAGCTTGGTAAGAGAGGACAAAGTGGATATACTTGTGGAACTTACTGGTCATACGGCAAATAACAAGTTAGGAACAATGGCATGCAGGCCTGCTCCTATTCAGGTTACATGGATTGGCTACCCTAATACAACAGGTCTGCCAACAATTGACTACAGAATAACAGATTCATTGGCTGACCCACCTGATACAACCCAAAAGCATGTTGAAGAGTTGGTGCGCCTTCCTGAAAGCTTTCTTTGTTACAGTCCTTCCCCAGAAGCTGGGCCAGTTTGTCCCACTCCAGCAATTTTAAATGGTTTCATCACGTTTGGGAGTTTTAATAATCTAGCAAAGATTACACCAAAAGTATTGCAAGTTTGGGCCAAAATTTTGTGTGCAGTCCCTAACTCCCGTCTTGTGGTTAAGTGTAAGCCATTCTGCTGCGACAGTATTAGACAGAAATTCCTATCAACACTAGCAGAATTGGGTTTGGAGCCGTTACGAGTTGACTTGCTGCCACTCATCCATCTCAACCATGATCACATGCAAGCATATTCCCTAATGGACATAAGCCTGGATACGTTTCCATATGCTGGAACTACTACTACATGTGAATCTCTATACATGGGGGTTCCATGTGTTACTATGGCTGGCTCAGTCCATGCTCATAATGNTGGTGTTAGTCTACTCACTAAA ] [+] EMBL CB625931 [ CATTGAACCTCCCCTTGCACACCATGACTACTCAAATTACAAGGTGGTTGTGTATTCTGGTGTTGTGAAGGCAGATGCCAAGACCCTTCGATTCAAGGATAAGGTATTAAAAAAGGGTGGGTTGTGGAGAGATATATATGGTATTGATGAAAAGAAGGTTGCTAGCTTGGTAAGAGAGGACAAAGTGGATATACTTGTGGAACTTACTGGTCATACGGCAAATAACAAGTTAGGAACAATGGCATGCAGGCCTGCTCCTATTCAGGTTACATGGATTGGCTACCCTAATACAACAGGTCTGCCAACAATTGACTACAGAATAACAGATTCATTGGCTGACCCACCTGATACAACCCAAAAGCATGTTGAAGAGTTGGTGCGCCTTCCTGAAAGCTTTCTTTGTTACAGTCCTTCCCCAGAAGCTGGGCCAGTTTGTCCCACTCCAGCAATTTTAAATGGTTTCATCACGTTTGGGAGTTTTAATAATCTAGCAAAGATTACACCAAAAGTATTGCAAGTTTGGGCCAAAATTTTGTGTGCAGTCCCTAACTCCCGTCTTGTGGTTAAGTGTAAGCCATTCTGCTGCGACAGTATTAGACAGAAATTCCTATCAACACTAGCAGAATTGGGTTTGGAGCCGTTACGAGTTGACTTGCTGCCACTCATCCATCTCAACCATGATCACATGCAAGCATATTCCCTAATGGACATAAGCCTGGATACGTTTCCATATGCTGGAACTACTACTACATGTGAATCTCTATACATGGGGGTTCCATGTGTTACTATGGCTGGCTCAGTCCATGCTCATAATGNTGGTGTTAGTCTA ] [+] EMBL CF324146 [ ctcgtgccgCAGGTCTGCCAACAATTGACTACAGAATAACAGATTCATTGGCTGACCCACCTGATACAACCCAAAAGCATGTTGAAGAGTTGGTGCGCCTTCCTGAAAGCTTTCTTTGTTACAGTCCTTCCCCAGAAGCTGGGCCAGTTTGTCCCACTCCAGCAATTTTAAATGGTTTCATCACGTTTGGGAGTTTTAATAATCTAGCAAAGATTACACCAAAAGTATTGCAAGTTTGGGCCAAAATTTTGTGTGCAGTCCCTAACTCCCGTCTTGTGGTTAAGTGTAAGCCATTCTGCTGCGACAGTATTAGACAGAAATTCCTATCAACACTAGCAGAATTGGGTTTGGAGCCGTTACGAGTTGACTTGCTGCCACTCATCCATCTCAACCATGATCACATGCAAGCATATTCCCTAATGGACATAAGCCTGGATACGTTTCCATATGCTGGAACTACTACTACATGTGAATCTCTATACATGGGGGTTCCATGTGTTACTATGGCTGGCTCAGTC ] [-] EMBL CB673991 [ TGGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGCGCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGCCATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATCTGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGCATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAG AAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGGAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAATTGACGG ] [-] EMBL CB676630 [ CCATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATCTGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGCATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAG AAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGGAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAATTGACGGCGGCATTTCAACAGGCTGTGTCATGATGTACATCTTCTAGTTCTGTGAGCCTGTTATTTCTTTCTACAGTCGCCATAGTATGCTTGATAGAAAAATGGTGCTCTTTTATCCCCTTTGTCAAAAATCAGGTTATTATCTACACGCATCAAGTCAAATTCTC] [-] EMBL AU225523 [ ccgctACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAGAAAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGGAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAATTGACGGCAGCggc ] consensusID : consensus_13931#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 777 fasta sequence [GGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGCGCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGCCATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATCTGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGCATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAGAAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGAAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAAAAGGGGGCGGCATTTCAACAGGCTGTGTCATGATTCTATAAAGAA] [-] EMBL CB625932 [GGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGCGCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGCCATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATCTGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGCATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTGTGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATTTGTCTGACACCCACAATGGATAAGAAAGAAGAGCACTTCTGTGCCATCCGACGGTGATTTCTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGAGTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCCATATGTTAGAAGAAACAGAGAAAGAGGAGAAAGCCCTTGTTGTAAATGCAGAAAAAACAGAACTGAAAAACTACTAGAATCAAAAGGGGGCGGCATTTCAACAGGCTGTGTCATGATTCTATAAAGAA] [+] EMBL AA750909 [ atcgTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGGATGGTGTGAGTTCACCTGTCTCTTCTGGGAAAGTTGAAGCAAATNNNCACATAANCCGGTGACCAAGGGGAGTCGAGCATACTCCATTGCCGTGGGAANCNCTGAC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13931#0 GAAAAAAAATACGAAAAGCAAAAAGGAATAAACGGAGGGGGCTAAACACCAAAATTCCCC 60 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTCTCCTTCTCCTTCCCCTCCTCCCGAAACCCTCGCCGCCGTCGCTGTCGAAACCCTCGC 120 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TGCTGCTGCTGCCGCACGGCGCGGCGGGGTACCGGGTCCCCCTCCCTGCGGCGGCGCGGA 180 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GGGGTAGGTCTCCCCCCCCTCGCTGCGGCGTGGCGGTGGGGGGTGCGGTGCCGGCTGCCG 240 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CGCCATGATCTTGCGCCGGTGGACTGCGCCTATCCAATAAAAAAAAAAGATAAAGATAGA 300 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 ACAAGTAGGTTACTTTCCGTACCATGGGGCGACCGGGGATGGACTCCAGCGAAGGGAGGG 360 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 AGAGCAATGGCGTTGTTCCTGAACGTAATGGTGGTGCTGTCCCTGCAAAACAGCAGTTGG 420 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 ACGGGAAGGACACCTTGCGGTACGCCAACATCCTCCGCTCCCGCAACAAATTTGCCGAAG 480 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CACTCCAGTTGTACAATAATGTCCTTGAGAAGGATGAAGCCAATGTGGAGGCCCTTATTG 540 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GCAAAGGGATTTGCCTCCAGGCACAGAGCCTACCTATGCAGGCCATCGAGTGCTTCAACG 600 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 AGGCCGTCAGGATCGACCCAGGGAATGCATGTGCTCTCACTTATTGTGGGATGATATACA 660 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 AAGATGAGGGTCACTTAGTTGAAGCTGCAGAGGCTTATCAAAAAGCTCGAAATGCAGATC 720 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTTCCTACAAACCTGCTGCAGAGTTTCTTGCTATTGTGTTGACCGATCTTGGAACTAGCT 780 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TGAAGCTTGCAGGTAATACAGAGGAGGGGATTCAAAAATATTGTGAAGCTTTGGAAGTTG 840 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 ACAGCCACTATGCGCCTGCTTATTACAACCTTGGTGTGGTTTACTCGGAGATGATGCAAT 900 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TTGATTTGGCTCTTACTTGTTACGAGAAAGCTGCTTTGGAGAGGCCATTGTATGCTGAAG 960 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTTATTGCAACATGGGAGTTATTTACAAGAATCGTGGAGAATTAGAAGCAGCAATTGCCT 1020 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GCTACGAGAGGTGCTTGACTATTTCCCCAAATTTTGAGATTGCCAAGAATAACATGGCAA 1080 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TAGCACTAACCGACTTGGGTACAAAGGTAAAAATTGAGGGTGACATTAATCAAGGTGTGG 1140 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CATATTACAAGAAAGCTCTGTTCTACAATTGGCACTACGCTGATGCCATGTATAATCTTG 1200 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GTGTCGCATATGGTGAAATGTTGAATTTTGAGATGGCTATTGTTTTTTACGAGCTTGCTC 1260 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TGCACTTCAATCCTCGCTGTGCGGAGGCATGCAACAACCTGGGAGTAATATACAAGGACA 1320 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GGGATAATCTTGACAAAGCTGTTGAATGTTATCAAATGGCCTTGTCAATTAAGCCAAATT 1380 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TCTCTCAGTCATTGAATAACCTTGGAGTTGTCTACACTGTCCAGGGAAAGATGGATGCTG 1440 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTTCAAGCATGATTCAGAAGGCCATATTTGCAAATTCCACGTATGCTGAAGCATATAATA 1500 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 ACTTGGGTGTTCTTTACAGAGATGCAGGAAGTATTACTTCAGCCGTACAAGCTTATGAGA 1560 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 AATGCCTTCAAATTGATCCTGATTCACGAAATGCTGGTCAGAATCGTTTGCTTGCGTTGA 1620 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 ATTATATTGATGAGGGCTTTGACGACAAGCTTTATCAAGCTCACAGGGAGTGGGGAAAAC 1680 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GCTTCCTGAAATTGTATCCACAGTATACTAGTTGGGATAACCCAAAAGTCGCTGATCGTC 1740 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTCTGGTCATTGGCTATGTGTCTCCTGATTACTTTACTCACTCTGTGTCATACTTCATTG 1800 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 AAGCTCCCCTTGCACACCATGACTACTCAAATTACAAGGTGGTTGTGTATTCTGGTGTTG 1860 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TGAAGGCAGATGCCAAGACCCTTCGATTCAAGGATAAGGTATTAAAAAAGGGTGGGTTGT 1920 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GGAGAGATATATATGGTATTGATGAAAAGAAGGTTGCTAGCTTGGTAAGAGAGGACAAAG 1980 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TGGATATACTTGTGGAACTTACTGGTCATACGGCAAATAACAAGTTAGGAACAATGGCAT 2040 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GCAGGCCTGCTCCTATTCAGGTTACATGGATTGGCTACCCTAATACAACAGGTCTGCCAA 2100 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CAATTGACTACAGAATAACAGATTCATTGGCTGACCCACCTGATACAACCCAAAAGCATG 2160 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TTGAAGAGTTGGTGCGCCTTCCTGAAAGCTTTCTTTGTTACAGTCCTTCCCCAGAAGCTG 2220 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 GGCCAGTTTGTCCCACTCCAGCAATTTTAAATGGTTTCATCACGTTTGGGAGTTTTAATA 2280 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 ATCTAGCAAAGATTACACCAAAAGTATTGCAAGTTTGGGCCAAAATTTTGTGTGCAGTCC 2340 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTAACTCCCGTCTTGTGGTTAAGTGTAAGCCATTCTGCTGCGACAGTATTAGACAGAAAT 2400 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TCCTATCAACACTAGCAGAATTGGGTTTGGAGCCGTTACGAGTTGACTTGCTGCCACTCA 2460 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TCCATCTCAACCATGATCACATGCAAGCATATTCCCTAATGGACATAAGCCTGGATACGT 2520 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TTCCATATGCTGGAACTACTACTACATGTGAATCTCTATACATGGGGGTTCCATGTGTTA 2580 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CTATGGCTGGCTCAGTCCATGCTCATAATGNTGGTGTTAGTCTACTCACTAAAGTTGGGC 2640 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TGGGGAGGCTGGTTGCGAAGTCTGAGAATGAATATGTTAGCTTAGCATTGGATTTAGCGG 2700 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CAGATGTTACTGCCTTGCAAGAACTGAGAATGAGCCTCCGAGGGCTGATGGCGAAATCAC 2760 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 CAGTGTGTGATGGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGC 2820 consensus_13931#1 -----------GGAGAGAATTTCACACGTGGTCTGGAATCTGCATACAGAAACATGTGGC 49 ************************************************* consensus_13931#0 GCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGC 2880 consensus_13931#1 GCAGATACTGTGATGGGGATGCACCTGCCCTCAGGCGGTTGGATCTGTTACAGGAAGAGC 109 ************************************************************ consensus_13931#0 CATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATC 2940 consensus_13931#1 CATGCTCCAATAACAATAAGCAAGATTTTGATGACAATCAGGTCGCAAAGCTCGCAGATC 169 ************************************************************ consensus_13931#0 TGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGC 3000 consensus_13931#1 TGAAAGCACAGAGAGTGGATGCCGCGGTAGATGGAGACAAGCAATCCCAGTTAACAGCGC 229 ************************************************************ consensus_13931#0 ATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCAC 3060 consensus_13931#1 ATGCTGCAGTAGTAGGGGAAGTTCAGCAGGCCCCAATAATGGTGAATGGTGTGAGTTCAC 289 ************************************************************ consensus_13931#0 CTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCG 3120 consensus_13931#1 CTGTCTCTTCTGGGAAAGTTGAAGCAAATGGGCACATAAGCCGGTGACCAAGGGGAGTCG 349 ************************************************************ consensus_13931#0 AGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTG 3180 consensus_13931#1 AGCATACTCCATTGATGTGGGAAACACTGACCCACTGTAGCTTGAGATGCACCATTGCTG 409 ************************************************************ consensus_13931#0 TGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATT 3240 consensus_13931#1 TGGTGGACATTTGTTCTTACAGAATTCGACGCTTTGCAGGCCTACACTGGGTGTCTCATT 469 ************************************************************ consensus_13931#0 TGTCTGACACCCACAATGGATAAGAAAGAAGAGCACTTCTGTGCCATCCGACGGTGATTT 3300 consensus_13931#1 TGTCTGACACCCACAATGGATAAGAAAGAAGAGCACTTCTGTGCCATCCGACGGTGATTT 529 ************************************************************ consensus_13931#0 CTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGA 3360 consensus_13931#1 CTCTGGTTACACTTTGACCTTTGTAGCAAATGTAAGATTGATGGGGGATATGCTTATAGA 589 ************************************************************ consensus_13931#0 GTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCC 3420 consensus_13931#1 GTTTGATTTGTAGAGGTATACCCCCTGTGTAGGTTTATGAACATGATGGCTTCAGTTGCC 649 ************************************************************ consensus_13931#0 ATATGTTAGAAGAAACAGAGAAAGAGGAGGAAGCCCTTGTTGTAAATGCAGAAAAAACAG 3480 consensus_13931#1 ATATGTTAGAAGAAACAGAGAAAGAGGAGAAAGCCCTTGTTGTAAATGCAGAAAAAACAG 709 ***************************** ****************************** consensus_13931#0 AACTGAAAAACTACTAGAATCAATTGACGGCGGCATTTCAACAGGCTGTGTCATGATGTA 3540 consensus_13931#1 AACTGAAAAACTACTAGAATCAAAAGGGGGCGGCATTTCAACAGGCTGTGTCATGAT-TC 768 *********************** * ***************************** * consensus_13931#0 CATCTTCTAGTTCTGTGAGCCTGTTATTTCTTTCTACAGTCGCCATAGTATGCTTGATAG 3600 consensus_13931#1 TATAAAGAA--------------------------------------------------- 777 ** * consensus_13931#0 AAAAATGGTGCTCTTTTATCCCCTTTGTCAAAAATCAGGTTATTATCTACACGCATCAAG 3660 consensus_13931#1 ------------------------------------------------------------ consensus_13931#0 TCAAATTCTC 3670 consensus_13931#1 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||