cluster # 13951

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Oryza sativa
cluster # 13951 cluster # 13951 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13951#0 length = 2143 sequences # 13

consensus_13951#1 length = 387 sequences # 1

consensusID : consensus_13951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 2143
fasta sequence

                              [CCCTCTCTGACTCCCCACCTCGCGCTCGCCTCACCCGACCATGCCGGGCCTCGCCGCGGCCGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGGCTGTCGTCGCCGCTGCCCAGGAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCACCTCGTCGCGGGCCAAGCCCAGGAAGGTGGCGGCGCAGCCGGAGACGGACGAGGCGGCGCTCGACAACCCGGATCTGGGGCCCTTCCTGCTCAAGCAGGCCCGCGACGCCATGGTCTCGGGGGAGGGCGGGGGCGCCGCGCGCGCGCTCGAGTTCGCCGAGAGGGCCGCCCGCGCGCTCGAGCGCCGCGGCGAGGGGGCCGAGCTCGAGCTCGCCATGAGCCTCCACGTCGCCGCCGCCATCCACTGCGGCCTCGGCAGGCACGCCGACGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACGCCGCCTCCGCCTCCGCCGCCGCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAGGACCAGCAGAAGGGGGAGGAGTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGCGACACCCACGCCATGCTCGGCCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTCGAGATCCAGATGGCCGCGCTCGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCATGTGCAAGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAAGCCCTCGAGATCCACCGGGAGCACAGCGCTCCCGCTTCGCTCG-AGGAGGCCTCCGACCGCCGCCTGATGGCACTCATCCTTG-ACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATGACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGC-TGCCCCTGATGAGGTTGCTGGA-GGCC-TAA-TGGAGATTGC-TGCCATCTATG-AGGCGCTTGGA-GACCTTGATGAGGCACTGAAGCTTTTGCAAAGGGCACTAA-AGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATCGAGGCACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCATTTGAAAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGAGTTCTGTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCACAGTTGTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGTGCCTCTCATCCAGATACTCTCGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATGGGCAGGGTTGAGGACGCCATTGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAGCTCGGCACAGCAAACCCGGATGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAAC-TTTGGCTTCAGGAGTTGAGGAACACACCCTCACCT-CACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAAAATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCCCCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTGGTTGATGATGAATTAATACT-ACTACTGTTACCACCTGTGATGTGATTT]

[+] EMBL AK069014             [CCCTCTCTGACTCCCCACCTCGCGCTCGCCTCACCCGACCATGCCGGGCCTCGCCGCGGCCGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGGCTGTCGTCGCCGCTGCCCAGGAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCACCTCGTCGCGGGCCAAGCCCAGGAAGGTGGCGGCGCAGCCGGAGACGGACGAGGCGGCGCTCGACAACCCGGATCTGGGGCCCTTCCTGCTCAAGCAGGCCCGCGACGCCATGGTCTCGGGGGAGGGCGGGGGCGCCGCGCGCGCGCTCGAGTTCGCCGAGAGGGCCGCCCGCGCGCTCGAGCGCCGCGGCGAGGGGGCCGAGCTCGAGCTCGCCATGAGCCTCCACGTCGCCGCCGCCATCCACTGCGGCCTCGGCAGGCACGCCGACGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACGCCGCCTCCGCCTCCGCCGCCGCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAGGACCAGCAGAAGGGGGAGGAGTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGCGACACCCACGCCATGCTCGGCCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTCGAGATCCAGATGGCCGCGCTCGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCATGTGCAAGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAAGCCCTCGAGATCCACCGGGAGCACAGCGCTCCCGCTTCGCTCG AGGAGGCCTCCGACCGCCGCCTGATGGCACTCATCCTTG ACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATGACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGC TGCCCCTGATGAGGTTGCTGGA GGCC TAA TGGAGATTGC TGCCATCTATG AGGCGCTTGGA GACCTTGATGAGGCACTGAAGCTTTTGCAAAGGGCACTAA AGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATCGAGGCACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCATTTGAAAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGAGTTCTGTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCACAGTTGTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGTGCCTCTCATCCAGATACTCTCGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATGGGCAGGGTTGAGGACGCCATTGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAGCTCGGCACAGCAAACCCGGATGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAAC TTTGGCTTCAGGAGTTGAGGAACACACCCTCACCT CACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAAAATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCCCCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTGGTTGATGATGAATTAATACT ACTACTGTTACCACCTGTGATGTGATTT]
[+] EMBL CB640268             [                    CGCGCTCGCCTCACCCGACCATGCCGGGCCTCGCCGCGGCCGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGGCTGTCGTCGCCGCTGCCCAGGAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCATCTCGTCGCGGGCCAAGCCCAGGAAGGTGGCGGCGCACCCGGAGACGGACGACGCGGCGCTCGACAACCCGGtat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BP184386             [                                                                                                                                                                                                                                                                                                                                                                                                                       GCAGGCACGCCGACGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACGCCGCCTCCGCCTCCGCCGCCGCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAGGACCAGCAGAAGGGGGAGGAGTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGCGACACCCACGCCATGCTCGGCCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTCGAGATCCAGATGGCCGCGCTCGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCATGTGCAAGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGAAAAG CCTTGAGATCCANCGGGAGCCAANNGTTTCCGNTTTGNTTGAAGAAGGCTTCCAACCGCCG CTGATGG ACTTAT CTTG ACNCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA753245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCATGTGCAAGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAAGCCCTCGAGATCCACCGGGAGCACAGCGCTCCCGCTTCGCTCG AGGAGGCCTCCGACCGCCGCCTGATGGCACTCATCCTTG ACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATGACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGC TGCCCCTGATGAGGTGGCTGGA GGCC TAN TGGAGATNGC TGCCATCTATG AGGCGCCTGGA GACCTTGATGAGGCACTGAAGCTTTTGCAAA GGCACTAANAG TGC TGAGGACTCA CANGACAGTGGA CCCTGTTGCTGGCATC AGG ACAANTGGGTGT TTGT CTACATGAT GGACGGTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU108805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCACTCATCCTTGAACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATGACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGANGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCA TCCGTGTCTATGCAAAGCCCGCGCCTGGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSC2952A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCTGGAGCACCTTGTG TTGCCTCCATGACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGCTTGCCCCTGATGAGGTTGCTGGAGGGCCTTAATTGGAGATTTCTTGCCATCTATGAAGGCGTTTTGAGGACCTTTATGAGGGACTTAAGTTTTTTCAAAGGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSR25101A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATNTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGC TGCCCCTGATGAGGTTGCTGGA GGCC TAA TGGAGATTGC TGCCATCTATG AGGCGCTTGGA GACCTTGATGAGGCACTGAAGCTTTTGCAAAGGGCACTAA AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AB110187             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGC TGCCCCTGATGAGGTTGCTGGA GGCC TAA TGGAGATTGC TGCCATCTATG AGGCGCTTGGA GACCTTGATGAGGCACTGAAGCTTTTGCAAAGGGCACTAA AGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATCGAGGCACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCATTTGAAAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGAGTTCTGTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCACAGTTGTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGTGCCTCTCATCCAGATACTCTCGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATGGGCAGGGTTGAGGACGCCATTGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAGCTCGGCACAGCAAACCCGGATGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAAC TTTGGCTTCAGGAGTTGAGGAACACACCCTCACCT CACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAAAATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCCCCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTGGTTGATGATGAATTAATACT AC                          ]
[+] EMBL BP184760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGC TGCCCCTGATGAGGTTGCTGGA GGCC TAA TGGAGATTGC TGCCATCTATG AGGCGCTTGGA GACCTTGATGAGGCACTGAAGCTTTTGCAAAGGGCACTAA AGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATCGAGGCACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCATTTGAAAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGAGTTCTGTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCACAGTTGTTTGAAGAGGCAAGGGCAGTTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BE230534             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGCAAACCCGGATGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAAC TTTGGCTTCAGGAGTTGAGGAACACACCCTCACCT CACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAAAATGCCATTGTTGTGAATTACAGCT                                                                                                                                           ]
[+] EMBL C74651               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGTCGAGGACGAGAAGCTAAGGCTTGCGGA CTTCTGAAGGAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAAC TTTGGCTTCAGGAGTTGAGGAACACACCCTCACCT CACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCG TTGAGATTCT AAATGCCATTGTTGTGAATTACA CTCGCTATTATCNCGA TA  TTTTTTTCCNCCCCACAGTTTTA                                                                                                 ]
[-] EMBL AU225741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGAAGGAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAAC TTTGGCTTCAGGAGTTGAGGAACACACCCTCACCT CACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAAAATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCCCCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTGGTTGATGATGAATTAATACTAACTACTGTTAaaaagcggc         ]
[+] EMBL AU031908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGCTGGGAGGAGGTGGTCCAACTTTTGGCTTCAGGAGTTGAGGAACACACCNTCACCTCCACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAACCCACATGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAAAATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCCCCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTGGTTGATGATGAATTAAaaa                              ]




>consensus_13951#0
CCCTCTCTGACTCCCCACCTCGCGCTCGCCTCACCCGACCATGCCGGGCCTCGCCGCGGC
CGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGGCTGTCGTCGCCGCTGCCCAG
GAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCACCTCGTCGCGGGCCAAGCCCAGGAAGGT
GGCGGCGCAGCCGGAGACGGACGAGGCGGCGCTCGACAACCCGGATCTGGGGCCCTTCCT
GCTCAAGCAGGCCCGCGACGCCATGGTCTCGGGGGAGGGCGGGGGCGCCGCGCGCGCGCT
CGAGTTCGCCGAGAGGGCCGCCCGCGCGCTCGAGCGCCGCGGCGAGGGGGCCGAGCTCGA
GCTCGCCATGAGCCTCCACGTCGCCGCCGCCATCCACTGCGGCCTCGGCAGGCACGCCGA
CGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACGCCGCCTCCGCCTCCGCCGCC
GCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAGGACCAGCAGAAGGGGGAGGA
GTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGCGACACCCACGCCATGCTCGG
CCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTCGAGATCCAGATGGCCGCGCT
CGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCATGTGCA
AGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAAGCCCTCGAGATCCACCGGGA
GCACAGCGCTCCCGCTTCGCTCGAGGAGGCCTCCGACCGCCGCCTGATGGCACTCATCCT
TGACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATGACCAT
GGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTA
CCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACT
CAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGA
CCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCG
TGTCTATGCAAAGCCCGCGCCTGGCGCTGCCCCTGATGAGGTTGCTGGAGGCCTAATGGA
GATTGCTGCCATCTATGAGGCGCTTGGAGACCTTGATGAGGCACTGAAGCTTTTGCAAAG
GGCACTAAAGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATCGAGGC
ACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCATTTGA
AAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGAGTTCT
GTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCACAGTT
GTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGTGCCTCTCATCCAGATACTCT
CGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATGGGCAGGGTTGAGGACGCCAT
TGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAGCTCGGCACAGCAAACCCGGA
TGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCCCGGAA
CAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGA
TGCTGGGAGGAGGTGGTCCAACTTTGGCTTCAGGAGTTGAGGAACACACCCTCACCTCAC
CTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACATGTGT
AAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGATTCTAA
AATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCCCCCAC
AGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTGGTTGA
TGATGAATTAATACTACTACTGTTACCACCTGTGATGTGATTT

consensusID : consensus_13951#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 387
fasta sequence

                              [ACGAGNTCGTGCCGAATTCGGCACGAGCCAACTCGCAGCGTGTTTAGAAAGATGCTGGGAGGANGTGGTCCAACTTTGGCTTCCCGAGTTGAAGGAAACACACCCTCACCTCACCTGGTGATGGAANGGGTGGCCTTTGTTAACATAAAGGGGAAAGAAGAAAGAAAAAACCNCNTGTNGTTAAGGTGGTTGTTNCACTAAGAAAGAATATGATGATGATTGTGTTTGCCCGTTTGAAATTCNAAAATGCCATTGTTGTNAATTACNAGCTCCCCTATTATCTCCAAGTNTTTTTTTTTCNCCCCCNCANTTTTAACTGGGTCNTAATGTTGGTATNGGATNNTTTTTTNNTTTGTGCCNGTGGNTGAAAGANNAATTNATACCACC]

[+] EMBL AA753150             [ACGAGNTCGTGCCGAATTCGGCACGAGCCAACTCGCAGCGTGTTTAGAAAGATGCTGGGAGGANGTGGTCCAACTTTGGCTTCCCGAGTTGAAGGAAACACACCCTCACCTCACCTGGTGATGGAANGGGTGGCCTTTGTTAACATAAAGGGGAAAGAAGAAAGAAAAAACCNCNTGTNGTTAAGGTGGTTGTTNCACTAAGAAAGAATATGATGATGATTGTGTTTGCCCGTTTGAAATTCNAAAATGCCATTGTTGTNAATTACNAGCTCCCCTATTATCTCCAAGTNTTTTTTTTTCNCCCCCNCANTTTTAACTGGGTCNTAATGTTGGTATNGGATNNTTTTTTNNTTTGTGCCNGTGGNTGAAAGANNAATTNATACCACC]




>consensus_13951#1
ACGAGNTCGTGCCGAATTCGGCACGAGCCAACTCGCAGCGTGTTTAGAAAGATGCTGGGA
GGANGTGGTCCAACTTTGGCTTCCCGAGTTGAAGGAAACACACCCTCACCTCACCTGGTG
ATGGAANGGGTGGCCTTTGTTAACATAAAGGGGAAAGAAGAAAGAAAAAACCNCNTGTNG
TTAAGGTGGTTGTTNCACTAAGAAAGAATATGATGATGATTGTGTTTGCCCGTTTGAAAT
TCNAAAATGCCATTGTTGTNAATTACNAGCTCCCCTATTATCTCCAAGTNTTTTTTTTTC
NCCCCCNCANTTTTAACTGGGTCNTAATGTTGGTATNGGATNNTTTTTTNNTTTGTGCCN
GTGGNTGAAAGANNAATTNATACCACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13951#0      CCCTCTCTGACTCCCCACCTCGCGCTCGCCTCACCCGACCATGCCGGGCCTCGCCGCGGC 60
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGGCTGTCGTCGCCGCTGCCCAG 120
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCACCTCGTCGCGGGCCAAGCCCAGGAAGGT 180
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GGCGGCGCAGCCGGAGACGGACGAGGCGGCGCTCGACAACCCGGATCTGGGGCCCTTCCT 240
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GCTCAAGCAGGCCCGCGACGCCATGGTCTCGGGGGAGGGCGGGGGCGCCGCGCGCGCGCT 300
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CGAGTTCGCCGAGAGGGCCGCCCGCGCGCTCGAGCGCCGCGGCGAGGGGGCCGAGCTCGA 360
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GCTCGCCATGAGCCTCCACGTCGCCGCCGCCATCCACTGCGGCCTCGGCAGGCACGCCGA 420
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACGCCGCCTCCGCCTCCGCCGCC 480
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAGGACCAGCAGAAGGGGGAGGA 540
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGCGACACCCACGCCATGCTCGG 600
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTCGAGATCCAGATGGCCGCGCT 660
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCATGTGCA 720
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      AGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAAGCCCTCGAGATCCACCGGGA 780
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GCACAGCGCTCCCGCTTCGCTCGAGGAGGCCTCCGACCGCCGCCTGATGGCACTCATCCT 840
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      TGACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATGACCAT 900
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAACACCTA 960
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACAGTACT 1020
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTCGCAGA 1080
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCACTCCG 1140
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      TGTCTATGCAAAGCCCGCGCCTGGCGCTGCCCCTGATGAGGTTGCTGGAGGCCTAATGGA 1200
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GATTGCTGCCATCTATGAGGCGCTTGGAGACCTTGATGAGGCACTGAAGCTTTTGCAAAG 1260
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GGCACTAAAGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATCGAGGC 1320
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      ACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCATTTGA 1380
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      AAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGAGTTCT 1440
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCACAGTT 1500
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      GTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGTGCCTCTCATCCAGATACTCT 1560
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATGGGCAGGGTTGAGGACGCCAT 1620
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      TGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAGCTCGGCACAGCAAACCCGGA 1680
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      TGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCCCGGAA 1740
consensus_13951#1      ------------------------------------------------------------
                                                                                   

consensus_13951#0      CAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAGAAAGA 1800
consensus_13951#1      -------ACGAGNTCGTGCCGAATTCGGCACGAG-CCAACTCGCAGCGTGTTTAGAAAGA 52
                                **  ***     **  *    ** * ***************** *******

consensus_13951#0      TGCTGGGAGGAGGTGGTCCAACTTTGGCTTCAGGAGTTGAGG--AACACACCCTCACCTC 1858
consensus_13951#1      TGCTGGGAGGANGTGGTCCAACTTTGGCTTCCCGAGTTGAAGGAAACACACCCTCACCTC 112
                       *********** *******************  ******* *  ****************

consensus_13951#0      ACCTGGTGATGGA--GGGTGGCCTTTGT-AACATAAAGGG--AAGAAGAA-GAAAAAACC 1912
consensus_13951#1      ACCTGGTGATGGAANGGGTGGCCTTTGTTAACATAAAGGGGAAAGAAGAAAGAAAAAACC 172
                       *************  ************* ***********  ******** *********

consensus_13951#0      ACATGTG--TAAAGGTGTTGTAG-ACTAGGAA-GAATATGATGATGATTGTGTTTGCC-G 1967
consensus_13951#1      NCNTGTNGTTAAGGTGGTTGTTNCACTAAGAAAGAATATGATGATGATTGTGTTTGCCCG 232
                        * ***   *** *  *****   **** *** ************************* *

consensus_13951#0      TTTGAGATTCTAAAATGCCATTGTTGTGAATTACAG--CTCGCTATTATCTC-GAGTATT 2024
consensus_13951#1      TTTGAAATTCNAAAATGCCATTGTTGTNAATTACNAGCTCCCCTATTATCTCCAAGTNTT 292
                       ***** **** **************** ******      * **********  *** **

consensus_13951#0      TTTTTTTCTCCCCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGAT 2084
consensus_13951#1      TTTTTTTCNCCCCCNCANTTTTAACTGGGTCNTAATGTTGGTATNGGATNNTTTTTTNNT 352
                       ******** ***** ** ********** ** ** *****   * ****  * * **  *

consensus_13951#0      TTGTGCTGGTGGTTGAT-GATGAATTAATACTACTACTGTTACCACCTGTGATGTGATTT 2143
consensus_13951#1      TTGTGCCNGTGGNTGAAAGANNAATTNATACCACC------------------------- 387
                       ******  **** ***  **  **** **** **