cluster # 13954

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Oryza sativa
cluster # 13954 cluster # 13954 Sequences # 14 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13954#0 length = 1722 sequences # 9
consensus_13954#1 length = 675 sequences # 1
consensus_13954#2 length = 664 sequences # 1

consensus_13954#3 length = 447 sequences # 1
consensus_13954#4 length = 398 sequences # 1
consensus_13954#5 length = 281 sequences # 1

consensusID : consensus_13954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1722
fasta sequence

                              [CTTCTCCTCCGTCTTCCTCGCGTGCAGAATAACCACTTCACCGCCGGATCTCACGGCGCCCCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAGGAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAAACGAGCAGAGAACTTGATCCGTGGAATCTTAGCAGGAAACATATTTGACTTAGGATCTGCACAGCTTGCAGAAGTTTTTGCTAAAGACGGTATGTCCTTCTTAGCGAGTTGCCAGAATCTTGTATCTCGACCTTGGGTTATCGATGACCTGGATGCATTTCAAAATAAATGGACTAAGAAATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCATATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGACATGCCATCAATCAATGATGTCACTTA-CCCAGAGCTTGTTGAAATTATAAACAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTT-GGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCACAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTGATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACTAGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAAGAAGATGAATTTTGTAACAGATTGCGTGGTTGCTGCCAAAAGATTGA]

[+] EMBL CF310065             [CTTCTCCTCCGTCTTCCTCGCGTGCAGAATAACCACTTCACCGCCGGATCTCACGGCGCCCCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAGGAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK063974             [                             TAACCACTTCACCGCCGGATCTCACGGCGCCCCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAGGAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAAACGAGCAGAGAACTTGATCCGTGGAATCTTAGCAGGAAACATATTTGACTTAGGATCTGCACAGCTTGCAGAAGTTTTTGCTAAAGACGGTATGTCCTTCTTAGCGAGTTGCCAGAATCTTGTATCTCGACCTTGGGTTATCGATGACCTGGATGCATTTCAAAATAAATGGACTAAGAAATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCATATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGACATGCCATCAATCAATGATGTCACTTA CCCAGAGCTTGTTGAAATTATAAACAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTT GGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCACAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTGATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACTAGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAAGAAGATGAATTTTGTAACAGATTGCGTGGTTGCTGCCAAAAGATTGA]
[+] EMBL CF314109             [                                      CACCGCCGGATCTCACGGCGCCCCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAGGAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAAACGAGCAGAGAACTTGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB630399             [                                            CGCATCTCACGGCGCCCCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAGGAGGAGCGATCCGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF312670             [                                                                      GCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAGGAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAAACGAGCAGAGAACTTGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK099286             [                                                                                                          CCGCCGACGAGCAGGAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTTCCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTTCGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCTCAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCCCGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAAACGAGCAGAGAACTTGATCCGTGGAATCTTAGCAGGAAACATATTTGACTTAGGATCTGCACAGCTTGCAGAAGTTTTTGCTAAAGACGGTATGTCCTTCTTAGCGAGTTGCCAGAATCTTGTATCTCGACCTTGGGTTATCGATGACCTGGATGCATTTCAAAATAAATGGACTAAGAAATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCATATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGACATGCCATCAATCAATGATGTCACTTA CCCAGAGCTTGTTGAAATTATAAACAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTT GGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCACAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTGATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACTAGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTT                                                           ]
[+] EMBL CF311268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAAACGAGCAGAGAACTTGATCCGTGGAATCTTAGCAGGAAACATATTTGACTTAGGATCTGCACAGCTTGCAGAAGTTTTTGCTAAAGACGGTATGTCCTTCTTAGCGAGTTGCCAGAATCTTGTATCTCGACCTTGGGTTATCGATGACCTGGATGCATTTCAAAATAAATGGACTAAGAAATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCATATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGACATGCCATCAATCAATGATGTCACTTA CCCAGAGCTTGTTGAAATTATAAACAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTT GGCAAATGATGCTGACTTAGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCACAAATGAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C27794               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAATAAATGGACTAAGAAATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCATATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGACATGCCATCAATCAATGATGTCACTTA CCCAGAGCTTGTTGAAATTATAAACAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTNGGC AATGATGCTGACTTGG CGGTCTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF314108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGACATGCCATCAATCAATGATGTCACTTACCCCAGAGCTTGTTGAAATTATAAACAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTT GGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCACAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAA                                                                                                                                                                                                                                                                       ]




>consensus_13954#0
CTTCTCCTCCGTCTTCCTCGCGTGCAGAATAACCACTTCACCGCCGGATCTCACGGCGCC
CCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAG
GAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTT
CCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTT
CGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCT
CAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCC
CGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAA
CCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGT
CCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAA
GGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAA
ACGAGCAGAGAACTTGATCCGTGGAATCTTAGCAGGAAACATATTTGACTTAGGATCTGC
ACAGCTTGCAGAAGTTTTTGCTAAAGACGGTATGTCCTTCTTAGCGAGTTGCCAGAATCT
TGTATCTCGACCTTGGGTTATCGATGACCTGGATGCATTTCAAAATAAATGGACTAAGAA
ATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCAT
ATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGA
CATGCCATCAATCAATGATGTCACTTACCCAGAGCTTGTTGAAATTATAAACAAGCTCAA
GGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGG
TAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTGGCAAA
TGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGC
ACAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATT
TTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAAC
ATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACA
TATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCAT
TTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTA
GGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACA
GTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTGATACC
GGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACTAGCCT
AACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAAGAAGA
TGAATTTTGTAACAGATTGCGTGGTTGCTGCCAAAAGATTGA

consensusID : consensus_13954#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence

                              [TCAATGATGTCCACTTTACCCAGAGCTTGTTGAAATTATAACCAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTGGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCNCAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAANTCGAACATTGTTTGATACCGGTTCTGCTNAAAAAAAAAAAAAA]

[+] EMBL AU092686             [TCAATGATGTCCACTTTACCCAGAGCTTGTTGAAATTATAACCAAGCTCAAGGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTGGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCNCAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAANTCGAACATTGTTTGATACCGGTTCTGCTNAAAAAAAAAAAAAA]




>consensus_13954#1
TCAATGATGTCCACTTTACCCAGAGCTTGTTGAAATTATAACCAAGCTCAAGGATGAAAA
TGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGGTAACGATTT
GCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTGGCAAATGATGCTGA
CTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCAACCTATATGCNCAAATGAA
ATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGG
GAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACAC
ACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATG
TGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGA
ATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGA
ATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTA
AAGTACCTCCGTGTTTTATCATGTTATTTAANTCGAACATTGTTTGATACCGGTTCTGCT
NAAAAAAAAAAAAAA

consensusID : consensus_13954#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence

                              [GTCNCCGGAACTAGCTTATTTGGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCACCCTATATGCACAAATGAATGTGACCCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTNCGGAACTTTTAATTCGTNATTNCTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTGATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACTAGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAAGAAGATGAATTTTGTAACAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU101066             [GTCNCCGGAACTAGCTTATTTGGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGGAAGAGCAATTGAAACCACCCTATATGCACAAATGAATGTGACCCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTNCGGAACTTTTAATTCGTNATTNCTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTGATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACTAGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAAGAAGATGAATTTTGTAACAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13954#2
GTCNCCGGAACTAGCTTATTTGGCAAATGATGCTGACTTGGTCGTTCTAGAAGGCATGGG
AAGAGCAATTGAAACCACCCTATATGCACAAATGAATGTGACCCGATTAAGATCGGAATG
GTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAA
TTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTT
CAACTGGTGCGAGGCTACACTGAACATATCACATGTGCTCGTCCCTTTCATATTAATAGC
AAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTNCGGAACTTTTAATTCG
TNATTNCTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCT
TCTGCGATTCAGATTAATAATAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTA
TTTAATTCGAACATTGTTTGATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCA
GTTGTGTTCTGTATTATACTAGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGC
CTTTACTTCGGATTTGGGAAGAAGATGAATTTTGTAACAAAAAAAAAAAAAAAAAAAAAA
AAAA

consensusID : consensus_13954#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence

                              [CTTGGTCGTTTTAGAAGGCACTGGGACGACCCATTGATAACCCACCCTATATGCCCCAATGAAATGTGACTCGATTAAGATCGGAATGGTTAAACATCCTGAAGTGGCNCCATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCGATGAGGCCTAAACTTTGATAACATCAGACACACTGCGGTTGCTTTATTTCGTTTTCNACTGGTGCGAGGCTACCCTGAACATATCACATGTGCTCGTCCCNTTCATATTAATACCCAGGAAAACCCTTTTTAGGGAATCCCATTACGGAACTTTTAATTCGTATTGCCCTACGTCNCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTCCGATTCAGATTAATAACCCCCGTTCAACTAAAGTACCCCCCTTTTTATCNTGTTATTTAAAAAAAAAA]

[+] EMBL BM038785             [CTTGGTCGTTTTAGAAGGCACTGGGACGACCCATTGATAACCCACCCTATATGCCCCAATGAAATGTGACTCGATTAAGATCGGAATGGTTAAACATCCTGAAGTGGCNCCATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCGATGAGGCCTAAACTTTGATAACATCAGACACACTGCGGTTGCTTTATTTCGTTTTCNACTGGTGCGAGGCTACCCTGAACATATCACATGTGCTCGTCCCNTTCATATTAATACCCAGGAAAACCCTTTTTAGGGAATCCCATTACGGAACTTTTAATTCGTATTGCCCTACGTCNCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTCCGATTCAGATTAATAACCCCCGTTCAACTAAAGTACCCCCCTTTTTATCNTGTTATTTAAAAAAAAAA]




>consensus_13954#3
CTTGGTCGTTTTAGAAGGCACTGGGACGACCCATTGATAACCCACCCTATATGCCCCAAT
GAAATGTGACTCGATTAAGATCGGAATGGTTAAACATCCTGAAGTGGCNCCATTTTTGGG
TGGGAGGCTTTATGATTGCGTCTTCAAATTCGATGAGGCCTAAACTTTGATAACATCAGA
CACACTGCGGTTGCTTTATTTCGTTTTCNACTGGTGCGAGGCTACCCTGAACATATCACA
TGTGCTCGTCCCNTTCATATTAATACCCAGGAAAACCCTTTTTAGGGAATCCCATTACGG
AACTTTTAATTCGTATTGCCCTACGTCNCCTTTTCATCTAGGTAGCGGAATAGTAAAAAG
GAAAAAAAAATCCCTTCTCCGATTCAGATTAATAACCCCCGTTCAACTAAAGTACCCCCC
TTTTTATCNTGTTATTTAAAAAAAAAA

consensusID : consensus_13954#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 398
fasta sequence

                              [TGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATGTCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAAAAAAAAAAAAAAAAAAACACTGTCATGCTGT]

[-] EMBL CF312671             [TGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATGTCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCAACTAAAAAAAAAAAAAAAAAAAAACACTGTCATGCTGT]




>consensus_13954#4
TGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCAATTTTTGG
GTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGATAACATCAG
ACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGAACATGTCA
CATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGGCATTTTTA
GGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGTGCCTTTTCATCTAGGTAG
CGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCGATTCAGATTAATAATAACAGTTCA
ACTAAAAAAAAAAAAAAAAAAAAACACTGTCATGCTGT

consensusID : consensus_13954#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 281
fasta sequence

                              [CTTTAATATGGAGTTTTCACTCATTCTTGGTCTCAAAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATNATGAGATTGAAGATGATNGAAAACGAGCAGAGGAACTTNGATCCGTGGAATC]

[+] EMBL C71962               [CTTTAATATGGAGTTTTCACTCATTCTTGGTCTCAAAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATNATGAGATTGAAGATGATNGAAAACGAGCAGAGGAACTTNGATCCGTGGAATC]




>consensus_13954#5
CTTTAATATGGAGTTTTCACTCATTCTTGGTCTCAAAGGTACACTGCAATGCTCGAGGAG
TTGAAGAAGAACCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTT
CGTGAGCTAGTCCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAG
GAGAATGCTAAGGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATNATGAGATTGAA
GATGATNGAAAACGAGCAGAGGAACTTNGATCCGTGGAATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CTTCTCCTCCGTCTTCCTCGCGTGCAGAATAACCACTTCACCGCCGGATCTCACGGCGCC 60
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CCAAGTTTAGGCGGTTACCTAACCACCCCACGAATCCCAGCCGCCGCCGCCGACGAGCAG 120
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      GAGGAGCGATCTGACTAGTAAGCCGGAGCACATGGAGAGCTCGTCGCCGTCGGTGCCGTT 180
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CCCGCTGCTGCAGGCGCCGGTGGAGAGCACGTACAGGGCCTGCACCATCCCCTACCGCTT 240
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CGCCTCCGACAACCCGCGAAAGGCCACCCCCGTCGAGATCCAGTGGATCGACCTCTTCCT 300
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CAACTCCGTCCCCTCCTTCAGGCAGCGCGCGGAGAACGACCCCACGGTGCCCGATGCGCC 360
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CGCCAAGGCCGAGAAGTTTGCCCAGAGGTACACTGCAATGCTCGAGGAGTTGAAGAAGAA 420
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CCCAGAGAGTAATGGAGGGCCACCAGATTGCATTCTTCTTTGCAGGCTTCGTGAGCTAGT 480
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CCTTAGAGAACTGGGATTTAGGGATATATTCAAGAAGGTTAAGGATGAGGAGAATGCTAA 540
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      GGCTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATGATGAGATTGAAGATGATGGAAA 600
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      ACGAGCAGAGAACTTGATCCGTGGAATCTTAGCAGGAAACATATTTGACTTAGGATCTGC 660
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      ACAGCTTGCAGAAGTTTTTGCTAAAGACGGTATGTCCTTCTTAGCGAGTTGCCAGAATCT 720
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      TGTATCTCGACCTTGGGTTATCGATGACCTGGATGCATTTCAAAATAAATGGACTAAGAA 780
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      ATCTTGGGAAAAGGCTGTTATTTTTGTTGATAATTCTGGCGCTGATATCATCTTGGGCAT 840
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      ATTACCATTTGCAAGGGAATTGCTCCGACATGGCACAAAGGTGATTCTTGCTGCCAATGA 900
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ---------TCAATGATGTCCACTTTACCCAGAGCTTGTTGAAATTATAACCAAGCTCAA 51
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      CATGCCATCAATCAATGATGTCACTTACCCAGAGCTTGTTGAAATTATAAACAAGCTCAA 960
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ------------------------------------------------------------
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      GGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGG 111
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      GGATGAAAATGGAAAGCTTGCAGGTGTGGATGCATCTGACCTACTCGTTGCCAACTCCGG 1020
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ---------------------------------GTCNCCGGAACTAGCTTATTTGGCAAA 27
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      TAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTGGCAAA 171
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      TAACGATTTGCCAGTAATTGATTTGTCCAGTGTGTCACCAGAACTAGCTTATTTGGCAAA 1080
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      TGATGCTGACTTGGTCGTTCTAGAAGGCA-TGGGAAGAGCAATTGAAA--CCACCCTATA 84
consensus_13954#3      ---------CTTGGTCGTTTTAGAAGGCACTGGGACGACCCATTGATAACCCACCCTATA 51
consensus_13954#1      TGATGCTGACTTGGTCGTTCTAGAAGGCA-TGGGAAGAGCAATTGAAA--CCAACCTATA 228
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      TGATGCTGACTTGGTCGTTCTAGAAGGCA-TGGGAAGAGCAATTGAAA--CCAACCTATA 1137
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      TGCACAAATGAA-TGTGACCCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCA 143
consensus_13954#3      TGCCCCAATGAAATGTGACTCGATTAAGATCGGAATGGTTAAACATCCTGAAGTGGCNCC 111
consensus_13954#1      TGCNCAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCA 288
consensus_13954#4      --------TGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCA 52
consensus_13954#0      TGCACAAATGAAATGTGACTCGATTAAGATCGGAATGGTAAAACATCCTGAAGTGGCGCA 1197
consensus_13954#5      -------------------------------------CTTTAATATGGAGTTTTCACTC- 22
                                                             *  ** **   *   *  * * 

consensus_13954#2      ATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGAT 203
consensus_13954#3      ATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCGATGAGGCCTAAACTTTGAT 171
consensus_13954#1      ATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGAT 348
consensus_13954#4      ATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGAT 112
consensus_13954#0      ATTTTTGGGTGGGAGGCTTTATGATTGCGTCTTCAAATTCAATGAGGCCTAAACTTTGAT 1257
consensus_13954#5      ATTCTTGGTCTCAAAGGTACACTGCAATGCTCGAGGAGTTGAAGAAG----AACCCAGAG 78
                       *** ****     * * *  *       *       * *  * ** *    ***   ** 

consensus_13954#2      AACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGA 263
consensus_13954#3      AACATCAGACACAC-TGCGGTTGCTTTATTTCGTTTTCNACTGGTGCGAGGCTACCCTGA 230
consensus_13954#1      AACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGA 408
consensus_13954#4      AACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGA 172
consensus_13954#0      AACATCAGACACACATGCGGTTGCTTTATTTCGTTTTCAACTGGTGCGAGGCTACACTGA 1317
consensus_13954#5      AGTAATGGAGGGCCACCAGATTGCATTCTTC--TTTGCAGGCTTCGTGAGCTAGTCCTTA 136
                       *  *   **    *    * **** ** **   *** *       * ***      ** *

consensus_13954#2      ACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGG 323
consensus_13954#3      ACATATCACATGTGCTCGTCCCNTTCATATTAATACCCAGGAAAAC-------------- 276
consensus_13954#1      ACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGG 468
consensus_13954#4      ACATGTCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGG 232
consensus_13954#0      ACATATCACATGTGCTCGTCCCTTTCATATTAATAGCAAGGAAAATAAGTTAGATCATGG 1377
consensus_13954#5      GAGAACTGGGATTTAGGGATATATTCAAG--AAGGTTAAGGATGAGGAG----------- 183
                                   *    *     ****    **     ****  *               

consensus_13954#2      CATTTTTAGGGAATGCAATTNCGGAACTTTTAATTCGTNAT-TNCTACGT-GCCTTTTCA 381
consensus_13954#3      CCTTTTTAGGGAATCCCATTACGGAACTTTTAATTCGTATTGCCCTACGTCNCCTTTTCA 336
consensus_13954#1      CATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGT-GCCTTTTCA 527
consensus_13954#4      CATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGT-GCCTTTTCA 291
consensus_13954#0      CATTTTTAGGGAATGCAATTACGGAACTTTTAATTCGTATTGCACTACGT-GCCTTTTCA 1436
consensus_13954#5      -AATGCTAAGG-------CTATGTCACTCTTTGAGGGCGTTGTTCAGCGAAATNATGAGA 235
                          *  ** **        *  *  *** **     *   *   *  **      *   *

consensus_13954#2      TCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCG-ATTCAGATTAATAA 440
consensus_13954#3      TCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTCCG-ATTCAGATTAATAA 395
consensus_13954#1      TCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCG-ATTCAGATTAATAA 586
consensus_13954#4      TCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCG-ATTCAGATTAATAA 350
consensus_13954#0      TCTAGGTAGCGGAATAGTAAAAAGGAAAAAAAAATCCCTTCTGCG-ATTCAGATTAATAA 1495
consensus_13954#5      TTGAAGATG----ATNGAAAACGAGCAGAGGAACTTNGATCCGTGGAATC---------- 281
                       *  * *  *    ** * ***   * * *  ** *    **   * * **          

consensus_13954#2      TAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTG 500
consensus_13954#3      CCCCCGTTCAACTAAAGTACCCCCCT-TTTTATCNTGTTATTTAAAAAAAAAA------- 447
consensus_13954#1      TAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAANTCGAACATTGTTTG 646
consensus_13954#4      TAACAGTTCAACTAAAAAA-----------------AAAAAAAAAAAAAAACACTGTC-- 391
consensus_13954#0      TAACAGTTCAACTAAAGTACCTCCGTGTTTTATCATGTTATTTAATTCGAACATTGTTTG 1555
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      ATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACT 560
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ATACCGGTTCTGCTNAAAAAAAAAAAAAA------------------------------- 675
consensus_13954#4      ATGCTGT----------------------------------------------------- 398
consensus_13954#0      ATACCGGTTCTGCTTCTGATAAAAGTGCCATTGAAGATCAGTTGTGTTCTGTATTATACT 1615
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      AGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAA 620
consensus_13954#3      ------------------------------------------------------------
consensus_13954#1      ------------------------------------------------------------
consensus_13954#4      ------------------------------------------------------------
consensus_13954#0      AGCCTAACTACTTCGCAGAAAAATGGGTGTATAGTGTAGCCTTTACTTCGGATTTGGGAA 1675
consensus_13954#5      ------------------------------------------------------------
                                                                                   

consensus_13954#2      GAAGATGAATTTTGTAACAAAAAAAAAAAAAAAAAAAAAAAAAA--- 664
consensus_13954#3      -----------------------------------------------
consensus_13954#1      -----------------------------------------------
consensus_13954#4      -----------------------------------------------
consensus_13954#0      GAAGATGAATTTTGTAACAGATTGCGTGGTTGCTGCCAAAAGATTGA 1722
consensus_13954#5      -----------------------------------------------