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Oryza sativa
cluster # 13958 cluster # 13958       Sequences # 14       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13958#0 length = 2189 sequences # 10  
 consensus_13958#1 length = 741 sequences # 3  
consensus_13958#2 length = 184 sequences # 1  
consensusID : consensus_13958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2189
fasta sequence 
                              [GGAATCCATCCATCGCGAGAGCAGAGGGAGGGGGATCGCGGCGGCGGCGGCAGCTGCGGCGAAGGGGGAAGCGCCGGAACGGGAGCCGTGGAGCGATCCGTCGGGCATCGGCGCCCGATGTGGGCGTGGGGCCTCGTCGAGCGCGCCGCCGCGGGCCTCCTCGGCCCCCTCGGCGGAGCCCATGGCGGCGGCCGATGGAACACCGCCGTCGCCGTCGGTGTCACGGCCGCCGCCGGCCTCGTGCTCGTCGTGATCGTTGTCTCCTCCCGCAGAGGTGGGCTCAAATCGCCGTGGTGGCGGCGGCGGAGGAAGGCCGCGCTTAAGCCCCATGAATGGGTCAGCTTGTTCACGCCGGAGGGGAAGCTTAAGGACGGCGGAGTGAAGCTTCTGAAGAAAGTTCGAAGCGGAGGGATTGAGCCAAGTATCAGAGCACAGGTCTGGCCATTCCTTCTGGGAGTTTACAGTCTTGGTAGTTCAGAATCTGAAAGAGACGCGGTTAAGGCACAGAACAGGAAAGGTTATCTGTTATTGAGGAACCATTGCCTGCGAAAATCTGTCTACATCAATGAAGAGAACAAACAATCAAATGAAGCCGCTGGAGCCAAACATGTGGAGTGTGTTAGTTCTGAAAAAGGCGAAGACACTGTCAATCCAGCTGGATCTGAAGAAGTACCTGATAAATCTAGTGTAGAAGAGCATCTTGTTGGCGATGACACTGTTGGTCCCGTTGTATCTGAAGAAGTGGCTGAAAAATCTTTTGTCGAAGATCATCTTGTTAGTGAGGAGGAAAATCCATCTGCCAATCCAGGAGAAGAAGTGCAGGATGACACATCTAAAACAAGCCCTGAGAAGCTGACAGATGGAAATCATTCTTCATCTAGTTCATCTAGTGAGGAAGAAAGTGAATCAAGTGGCCTGACTCATGTAGAAACATCTCATATGGTTGTCGCCTCAGTTCAGCAATCTTTAACTGAGGATGAACAAGAAAGTATCCCGAGATATTCCAACACAGGAGGAAACATGGAAAATGATAGCGAGTTATCTAAGGCTGCTCGTCCTGTGAAATCTGTACGCACAATTGAGGATTTTGAGACTTGGCAACGAATTATCCGCTTGGATGCAGTTCGTGCTAATGATGAATGGGTTTCTTACTCCCCATCTCAAGCTGTAGTTTCCAGGGAGAAGGCAATTGAATCTGCTAAAGCTGTTTGTCTGAAAGATTACGAACATTTGGAACCACATAGGATCCGTCATGCAGCACGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAGGGCATGAGCGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTCTGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGCATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGGACTGCTTCTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTAT-GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC-TTGCTACTATATGCAATT-GCGGCCAGCGTGCTGCAGAAGAGG-AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA-CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCACTAACACTCCCTCCATGGATATGTGTTAGTTTGGGACTACAGACCTACAGTACCACAGGCTCAGTTGCATGGTGTCCCAGTCTAGCTGCCTCTCAGGATTAGGCCATTATCTTTTCTTGATCATAGTGGTGTAACTGGACCATCTATGCGTGTGGATTTCTTTCTTGCTGTGGTCGCTGTCAGTATCCTGCAAATCCATGTGATAGCATCATACCAATG]

[+] EMBL AK099843             [GGAATCCATCCATCGCGAGAGCAGAGGGAGGGGGATCGCGGCGGCGGCGGCAGCTGCGGCGAAGGGGGAAGCGCCGGAACGGGAGCCGTGGAGCGATCCGTCGGGCATCGGCGCCCGATGTGGGCGTGGGGCCTCGTCGAGCGCGCCGCCGCGGGCCTCCTCGGCCCCCTCGGCGGAGCCCATGGCGGCGGCCGATGGAACACCGCCGTCGCCGTCGGTGTCACGGCCGCCGCCGGCCTCGTGCTCGTCGTGATCGTTGTCTCCTCCCGCAGAGGTGGGCTCAAATCGCCGTGGTGGCGGCGGCGGAGGAAGGCCGCGCTTAAGCCCCATGAATGGGTCAGCTTGTTCACGCCGGAGGGGAAGCTTAAGGACGGCGGAGTGAAGCTTCTGAAGAAAGTTCGAAGCGGAGGGATTGAGCCAAGTATCAGAGCACAGGTCTGGCCATTCCTTCTGGGAGTTTACAGTCTTGGTAGTTCAGAATCTGAAAGAGACGCGGTTAAGGCACAGAACAGGAAAGGTTATCTGTTATTGAGGAACCATTGCCTGCGAAAATCTGTCTACATCAATGAAGAGAACAAACAATCAAATGAAGCCGCTGGAGCCAAACATGTGGAGTGTGTTAGTTCTGAAAAAGGCGAAGACACTGTCAATCCAGCTGGATCTGAAGAAGTACCTGATAAATCTAGTGTAGAAGAGCATCTTGTTGGCGATGACACTGTTGGTCCCGTTGTATCTGAAGAAGTGGCTGAAAAATCTTTTGTCGAAGATCATCTTGTTAGTGAGGAGGAAAATCCATCTGCCAATCCAGGAGAAGAAGTGCAGGATGACACATCTAAAACAAGCCCTGAGAAGCTGACAGATGGAAATCATTCTTCATCTAGTTCATCTAGTGAGGAAGAAAGTGAATCAAGTGGCCTGACTCATGTAGAAACATCTCATATGGTTGTCGCCTCAGTTCAGCAATCTTTAACTGAGGATGAACAAGAAAGTATCCCGAGATATTCCAACACAGGAGGAAACATGGAAAATGATAGCGAGTTATCTAAGGCTGCTCGTCCTGTGAAATCTGTACGCACAATTGAGGATTTTGAGACTTGGCAACGAATTATCCGCTTGGATGCAGTTCGTGCTAATGATGAATGGGTTTCTTACTCCCCATCTCAAGCTGTAGTTTCCAGGGAGAAGGCAATTGAATCTGCTAAAGCTGTTTGTCTGAAAGATTACGAACATTTGGAACCACATAGGATCCGTCATGCAGCACGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAGGGCATGAGCGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTCTGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGCATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGGACTGCTTCTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTAT GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC TTGCTACTATATGCAATT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCT                                                                                                                                                                                                                                   ]
[+] EMBL AK068787             [ GAATCCATCCATCGCGAGAGCAGAGGGAGGGGGATCGCGGCGGCGGCGGCAGCTGCGGCGAAGGGGGAAGCGCCGGAACGGGAGCCGTGGAGCGATCCGTCGGGCATCGGCGCCCGATGTGGGCGTGGGGCCTCGTCGAGCGCGCCGCCGCGGGCCTCCTCGGCCCCCTCGGCGGAGCCCATGGCGGCGGCCGATGGAACACCGCCGTCGCCGTCGGTGTCACGGCCGCCGCCGGCCTCGTGCTCGTCGTGATCGTTGTCTCCTCCCGCAGAGGTGGGCTCAAATCGCCGTGGTGGCGGCGGCGGAGGAAGGCCGCGCTTAAGCCCCATGAATGGGTCAGCTTGTTCACGCCGGAGGGGAAGCTTAAGGACGGCGGAGTGAAGCTTCTGAAGAAAGTTCGAAGCGGAGGGATTGAGCCAAGTATCAGAGCACAGGTCTGGCCATTCCTTCTGGGAGTTTACAGTCTTGGTAGTTCAGAATCTGAAAGAGACGCGGTTAAGGCACAGAACAGGAAAGGTTATCTGTTATTGAGGAACCATTGCCTGCGAAAATCTGTCTACATCAATGAAGAGAACAAACAATCAAATGAAGCCGCTGGAGCCAAACATGTGGAGTGTGTTAGTTCTGAAAAAGGCGAAGACACTGTCAATCCAGCTGGATCTGAAGAAGTACCTGATAAATCTAGTGTAGAAGAGCATCTTGTTGGCGATGACACTGTTGGTCCCGTTGTATCTGAAGAAGTGGCTGAAAAATCTTTTGTCGAAGATCATCTTGTTAGTGAGGAGGAAAATCCATCTGCCAATCCAGGAGAAGAAGTGCAGGATGACACATCTAAAACAAGCCCTGAGAAGCTGACAGATGGAAATCATTCTTCATCTAGTTCATCTAGTGAGGAAGAAAGTGAATCAAGTGGCCTGACTCATGTAGAAACATCTCATATGGTTGTCGCCTCAGTTCAGCAATCTTTAACTGAGGATGAACAAGAAAGTATCCCGAGATATTCCAACACAGGAGGAAACATGGAAAATGATAGCGAGTTATCTAAGGCTGCTCGTCCTGTGAAATCTGTACGCACAATTGAGGATTTTGAGACTTGGCAACGAATTATCCGCTTGGATGCAGTTCGTGCTAATGATGAATGGGTTTCTTACTCCCCATCTCAAGCTGTAGTTTCCAGGGAGAAGGCAATTGAATCTGCTAAAGCTGTTTGTCTGAAAGATTACGAACATTTGGAACCACATAGGATCCGTCATGCAGCACGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAGGGCATGAGCGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTCTGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGCATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGGACTGCTTCTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTAT GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC TTGCTACTATATGCAATT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCACTAACACTCCCTCCATGGATATGTGTTAGTTTGGGACTACAGACCTACAGTACCACAGGCTCAGTTGCATGGTGTCCCAGTCTAGCTGCCTCTCAGGATTAGGCCATTATCTTTTCTTGATCATAGTGGTGTAACTGGACCATCTATGCGTGTGGATTTCTTTCTTGCTGTGGTCGCTGTCAGTATCCTGCAAATCCATGTGATAGCATCATACCAATG]
[+] EMBL CB644976             [         CCATCGCGAGAGCAGAGGGAGGGGGATCGCGGCGGCGGCGGCAGCTGCGGCGAAGGGGGAAGCGCCGGAACGGGAGCCGTGGAGCGATCCGTCGGGCATCGGCGCCCGATGTGGGCGTGGGGCCTCGTCGAGCGCGCCGCCGCGGGCCTCCTCGGCCCCCTCGGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB000077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCAGTTCGTGCTAATGATGAATGGGTTTCTTACCTTCCATCTCAAGCTGTAGTTTCCAGGGAGAAGGCAATTGAATCTGCTAAAGCTGTTTGTCTGAAAGATTACGAACATTTGGAACCACATAGGATCCGTCATGCAGCACGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAGGGCATGAGTGACCTTCTTGCACCTCTACTTGCCGAACTGGAAGATGACAATGAAGCCTTCTGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB644977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGAACCACATAGGATCCGTCATGCAGCACGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAGGGCATGAGCGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTCTGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGCATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGGACTGTTTTTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTTTATGGGAGGTTAT GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC TTGCTACTATATGCAATT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTTTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTC                                                                                                                                                                                                                                  ]
[+] EMBL CA767058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aggggGGATATTGCCAGGGCATGAGTGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTCTGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGCATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGGACTGCTTCTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTAT GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC TTGCTACTATATGCGATT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTC                                                                                                                                                                                                                                  ]
[-] EMBL CF324646             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTAT GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC TTGCTACTATATGCAATT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCAaaa                                                                                                                                                                                                                                   ]
[+] EMBL BI809401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGA GTTATAGT GGCCGATCAGGCAGCCAACCGTGCTGGAATT C AAATCATCGTTGGGGAAACTGC GTTAGGAGCCCCTCCAACTGATGACTTTGCTACTATATGCAATTGGCGGCCAGCGTGCT CAGAAGAGGAAAACTGATAATAGAGAGCTATACCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACACCGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCAT                                                                                                                                                                                                                                            ]
[-] EMBL CF325488             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTAT GTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAACTGATGAC TTGCTACTATATGCAATT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCAaaa                                                                                                                                                                                                                                   ]
[+] EMBL OSC04881A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TT GCGGCCAGCGTGCTGCAGAAGAGG AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATGGCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACA CGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCACTAAaaa                                                                                                                                                                                                                    ]




>consensus_13958#0
GGAATCCATCCATCGCGAGAGCAGAGGGAGGGGGATCGCGGCGGCGGCGGCAGCTGCGGC
GAAGGGGGAAGCGCCGGAACGGGAGCCGTGGAGCGATCCGTCGGGCATCGGCGCCCGATG
TGGGCGTGGGGCCTCGTCGAGCGCGCCGCCGCGGGCCTCCTCGGCCCCCTCGGCGGAGCC
CATGGCGGCGGCCGATGGAACACCGCCGTCGCCGTCGGTGTCACGGCCGCCGCCGGCCTC
GTGCTCGTCGTGATCGTTGTCTCCTCCCGCAGAGGTGGGCTCAAATCGCCGTGGTGGCGG
CGGCGGAGGAAGGCCGCGCTTAAGCCCCATGAATGGGTCAGCTTGTTCACGCCGGAGGGG
AAGCTTAAGGACGGCGGAGTGAAGCTTCTGAAGAAAGTTCGAAGCGGAGGGATTGAGCCA
AGTATCAGAGCACAGGTCTGGCCATTCCTTCTGGGAGTTTACAGTCTTGGTAGTTCAGAA
TCTGAAAGAGACGCGGTTAAGGCACAGAACAGGAAAGGTTATCTGTTATTGAGGAACCAT
TGCCTGCGAAAATCTGTCTACATCAATGAAGAGAACAAACAATCAAATGAAGCCGCTGGA
GCCAAACATGTGGAGTGTGTTAGTTCTGAAAAAGGCGAAGACACTGTCAATCCAGCTGGA
TCTGAAGAAGTACCTGATAAATCTAGTGTAGAAGAGCATCTTGTTGGCGATGACACTGTT
GGTCCCGTTGTATCTGAAGAAGTGGCTGAAAAATCTTTTGTCGAAGATCATCTTGTTAGT
GAGGAGGAAAATCCATCTGCCAATCCAGGAGAAGAAGTGCAGGATGACACATCTAAAACA
AGCCCTGAGAAGCTGACAGATGGAAATCATTCTTCATCTAGTTCATCTAGTGAGGAAGAA
AGTGAATCAAGTGGCCTGACTCATGTAGAAACATCTCATATGGTTGTCGCCTCAGTTCAG
CAATCTTTAACTGAGGATGAACAAGAAAGTATCCCGAGATATTCCAACACAGGAGGAAAC
ATGGAAAATGATAGCGAGTTATCTAAGGCTGCTCGTCCTGTGAAATCTGTACGCACAATT
GAGGATTTTGAGACTTGGCAACGAATTATCCGCTTGGATGCAGTTCGTGCTAATGATGAA
TGGGTTTCTTACTCCCCATCTCAAGCTGTAGTTTCCAGGGAGAAGGCAATTGAATCTGCT
AAAGCTGTTTGTCTGAAAGATTACGAACATTTGGAACCACATAGGATCCGTCATGCAGCA
CGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAG
GGCATGAGCGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTC
TGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGC
ATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTAC
AGACATTTGGAGATGCTCCAAGCTGAGGACTGCTTCTTTGTTTACAGAATGGTGGTGGTC
ATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTATGTGGGCC
GATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGA
GCCCCTCCAACTGATGACTTGCTACTATATGCAATTGCGGCCAGCGTGCTGCAGAAGAGG
AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATG
GCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTT
CACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACACGGCTTGTT
GTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCACTAACACTCC
CTCCATGGATATGTGTTAGTTTGGGACTACAGACCTACAGTACCACAGGCTCAGTTGCAT
GGTGTCCCAGTCTAGCTGCCTCTCAGGATTAGGCCATTATCTTTTCTTGATCATAGTGGT
GTAACTGGACCATCTATGCGTGTGGATTTCTTTCTTGCTGTGGTCGCTGTCAGTATCCTG
CAAATCCATGTGATAGCATCATACCAATG

consensusID : consensus_13958#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 741
fasta sequence 
                              [GGTGGGAAAATGCCAGGGCATGAGTGCGCTTCTTGCCCTTTTACTTCCGGTCTGGAAAAATCACAATGAAGCCTTTTGGTGCTTTGCTGGTTTTATGAGAAAAGCCGTGCATAATTTCAGGCTTGATGAAGTGGGCACTCCCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGGCTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGAACTGCTTCTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTATGTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATTATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAAATGATGACTTGCTACTATATGCGATTGCGGCCAGCGTGCTGCAGAAGAGGAAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGACTGTAACAGCATGGCTGGGCATTTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACACGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCTTGCCGTTACGTACCGTAT]

[-] EMBL CA759029             [GGTGGGAAAATGCCAGGGCATGAGTGCGCTTCTTGCCCTTTTACTTCCGGTCTGGAAAAATCACAATGAAGCCTTTTGGTGCTTTGCTGGTTTTATGAGAAAAGCCGTGCATAATTTCAGGCTTGATGAAGTGGGCACTCCCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGGCTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGAACTGCTTCTTTGTTTACAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTATGTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATTATCGTTGGGGAAACTGCGGTTAGGAGCCCCTCCAAATGATGACTTGCTACTATATGCGATTGCGGCCAGCGTGCTGCAGAAGAGGAAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGACTGTAACAGCATGGCTGGGCATTTGGACATTTGGAAGCTCCTGGACGATGCCCCCCATCTAGTAAAAACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACACGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCCCTAAAAAAAAAAAA                                                             ]
[+] EMBL CF332660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACACGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCTTGCCGTTACGTACCGTAT]
[+] EMBL CF333625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATTTTGTACACGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAca                                              ]




>consensus_13958#1
GGTGGGAAAATGCCAGGGCATGAGTGCGCTTCTTGCCCTTTTACTTCCGGTCTGGAAAAA
TCACAATGAAGCCTTTTGGTGCTTTGCTGGTTTTATGAGAAAAGCCGTGCATAATTTCAG
GCTTGATGAAGTGGGCACTCCCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAA
GGGCTTCCATCTTTACAGACATTTGGAGATGCTCCAAGCTGAGAACTGCTTCTTTGTTTA
CAGAATGGTGGTGGTCATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATG
GGAGGTTATGTGGGCCGATCAGGCAGCAAACCGTGCTGGAATTGCAAAATTATCGTTGGG
GAAACTGCGGTTAGGAGCCCCTCCAAATGATGACTTGCTACTATATGCGATTGCGGCCAG
CGTGCTGCAGAAGAGGAAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAG
GGACTGTAACAGCATGGCTGGGCATTTGGACATTTGGAAGCTCCTGGACGATGCGCACGA
TCTAGTAACGACCCTTCACGGTAGGATTGAGTAGTGATATACTGATACACTCTACTCATT
TTGTACACGGCTTGTTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCT
TTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTG
TCTTGCCGTTACGTACCGTAT

consensusID : consensus_13958#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 184
fasta sequence 
                              [ACAGACTGGACACTTCTGAAAGTCTTCTCTGAGAGCAGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGCTACTGATATTCTGATACACTCTACCCATTGTTGAACACGGCTTGGTTGTATTACTTTACACATTTTCATCCGTACGTCATAATTCATCTCTTTCTCACTAAAAA]

[+] EMBL BI809226             [ACAGACTGGACACTTCTGAAAGTCTTCTCTGAGAGCAGATGCGCACGATCTAGTAACGACCCTTCACGGTAGGATTGAGCTACTGATATTCTGATACACTCTACCCATTGTTGAACACGGCTTGGTTGTATTACTTTACACATTTTCATCCGTACGTCATAATTCATCTCTTTCTCACTAAAAA]




>consensus_13958#2
ACAGACTGGACACTTCTGAAAGTCTTCTCTGAGAGCAGATGCGCACGATCTAGTAACGAC
CCTTCACGGTAGGATTGAGCTACTGATATTCTGATACACTCTACCCATTGTTGAACACGG
CTTGGTTGTATTACTTTACACATTTTCATCCGTACGTCATAATTCATCTCTTTCTCACTA
AAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13958#0      GGAATCCATCCATCGCGAGAGCAGAGGGAGGGGGATCGCGGCGGCGGCGGCAGCTGCGGC 60
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GAAGGGGGAAGCGCCGGAACGGGAGCCGTGGAGCGATCCGTCGGGCATCGGCGCCCGATG 120
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TGGGCGTGGGGCCTCGTCGAGCGCGCCGCCGCGGGCCTCCTCGGCCCCCTCGGCGGAGCC 180
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      CATGGCGGCGGCCGATGGAACACCGCCGTCGCCGTCGGTGTCACGGCCGCCGCCGGCCTC 240
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GTGCTCGTCGTGATCGTTGTCTCCTCCCGCAGAGGTGGGCTCAAATCGCCGTGGTGGCGG 300
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      CGGCGGAGGAAGGCCGCGCTTAAGCCCCATGAATGGGTCAGCTTGTTCACGCCGGAGGGG 360
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AAGCTTAAGGACGGCGGAGTGAAGCTTCTGAAGAAAGTTCGAAGCGGAGGGATTGAGCCA 420
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AGTATCAGAGCACAGGTCTGGCCATTCCTTCTGGGAGTTTACAGTCTTGGTAGTTCAGAA 480
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TCTGAAAGAGACGCGGTTAAGGCACAGAACAGGAAAGGTTATCTGTTATTGAGGAACCAT 540
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TGCCTGCGAAAATCTGTCTACATCAATGAAGAGAACAAACAATCAAATGAAGCCGCTGGA 600
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GCCAAACATGTGGAGTGTGTTAGTTCTGAAAAAGGCGAAGACACTGTCAATCCAGCTGGA 660
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TCTGAAGAAGTACCTGATAAATCTAGTGTAGAAGAGCATCTTGTTGGCGATGACACTGTT 720
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GGTCCCGTTGTATCTGAAGAAGTGGCTGAAAAATCTTTTGTCGAAGATCATCTTGTTAGT 780
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GAGGAGGAAAATCCATCTGCCAATCCAGGAGAAGAAGTGCAGGATGACACATCTAAAACA 840
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AGCCCTGAGAAGCTGACAGATGGAAATCATTCTTCATCTAGTTCATCTAGTGAGGAAGAA 900
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AGTGAATCAAGTGGCCTGACTCATGTAGAAACATCTCATATGGTTGTCGCCTCAGTTCAG 960
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      CAATCTTTAACTGAGGATGAACAAGAAAGTATCCCGAGATATTCCAACACAGGAGGAAAC 1020
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      ATGGAAAATGATAGCGAGTTATCTAAGGCTGCTCGTCCTGTGAAATCTGTACGCACAATT 1080
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GAGGATTTTGAGACTTGGCAACGAATTATCCGCTTGGATGCAGTTCGTGCTAATGATGAA 1140
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TGGGTTTCTTACTCCCCATCTCAAGCTGTAGTTTCCAGGGAGAAGGCAATTGAATCTGCT 1200
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AAAGCTGTTTGTCTGAAAGATTACGAACATTTGGAACCACATAGGATCCGTCATGCAGCA 1260
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      CGCCTTGTTCCAATTCTTGAGGCTTATGCCATCTATGACCCAGAAATTGGATATTGCCAG 1320
consensus_13958#1      --------------------------------------------GGTGGGAAAATGCCAG 16
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GGCATGAGCGACCTTCTTGCACCTCTACTTGCCGTACTGGAAGATGACAATGAAGCCTTC 1380
consensus_13958#1      GGCATGAGTGCGCTTCTTGCCCTTTTACTTCCGGTCTGGAAAAATCACAATGAAGCCTTT 76
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TGGTGCTTTGCTGGTTTTATGAGGAAAGCCCGTCATAATTTCAGGCTTGATGAAGTGGGC 1440
consensus_13958#1      TGGTGCTTTGCTGGTTTTATGAGAAAAGCCGTGCATAATTTCAGGCTTGATGAAGTGGGC 136
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      ATTCGCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGACTTCCATCTTTAC 1500
consensus_13958#1      ACTCCCAGGCAACTGAACATGGTAGCCAGGATAATCAAATACAAGGGCTTCCATCTTTAC 196
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AGACATTTGGAGATGCTCCAAGCTGAGGACTGCTTCTTTGTTTACAGAATGGTGGTGGTC 1560
consensus_13958#1      AGACATTTGGAGATGCTCCAAGCTGAGAACTGCTTCTTTGTTTACAGAATGGTGGTGGTC 256
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      ATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTATGTGGGCC 1620
consensus_13958#1      ATGTTCCGAAGGGAGCTGACCTTTGAGCAGACCCTCTGTCTATGGGAGGTTATGTGGGCC 316
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GATCAGGCAGCAAACCGTGCTGGAATTGCAAAATCATCGTTGGGGAAACTGCGGTTAGGA 1680
consensus_13958#1      GATCAGGCAGCAAACCGTGCTGGAATTGCAAAATTATCGTTGGGGAAACTGCGGTTAGGA 376
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GCCCCTCCAACTGATGACTTGCTACTATATGCAATTGCGGCCAGCGTGCTGCAGAAGAGG 1740
consensus_13958#1      GCCCCTCCAAATGATGACTTGCTACTATATGCGATTGCGGCCAGCGTGCTGCAGAAGAGG 436
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGAGTGTAACAGCATG 1800
consensus_13958#1      AAACTGATAATAGAGAGCTATAGCAGCATGGATGAGATCATAAGGGACTGTAACAGCATG 496
consensus_13958#2      -------------------------------------------------------ACA-G 4
                                                                               ** *

consensus_13958#0      GCTGGGCAGCTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTT 1860
consensus_13958#1      GCTGGGCATTTGGACATTTGGAAGCTCCTGGACGATGCGCACGATCTAGTAACGACCCTT 556
consensus_13958#2      ACTGGACACTTCTGAAAGTCTTCTCTGAGAGCAGATGCGCACGATCTAGTAACGACCCTT 64
                        **** **  *    *  *     **    *  ***************************

consensus_13958#0      CACGGTAGGATTGAG-TAGTGATATACTGATACACTCTACTCATT-TTGTACACGGCTTG 1918
consensus_13958#1      CACGGTAGGATTGAG-TAGTGATATACTGATACACTCTACTCATT-TTGTACACGGCTTG 614
consensus_13958#2      CACGGTAGGATTGAGCTACTGATATTCTGATACACTCTACCCATTGTTGAACACGGCTTG 124
                       *************** ** ****** ************** **** *** **********

consensus_13958#0      -TTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCACTAACAC 1977
consensus_13958#1      -TTGTATTACTTTACACATTTTCATCCTTACGTCATATTTCATCTCTTTTTCAAAAAAAA 673
consensus_13958#2      GTTGTATTACTTTACACATTTTCATCCGTACGTCATAATTCATCTCTTTCTCACTAAAAA 184
                        ************************** ********* *********** ***  ** * 

consensus_13958#0      TCCCTCCATGGATATGTGTTAGTTTGGGACTACAGACCTACAGTACCACAGGCT-CAGTT 2036
consensus_13958#1      AAA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCTTGCCGTT 730
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      GCATGGTGTCCCAGTCTAGCTGCCTCTCAGGATTAGGCCATTATCTTTTCTTGATCATAG 2096
consensus_13958#1      ACGTACCGTAT------------------------------------------------- 741
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      TGGTGTAACTGGACCATCTATGCGTGTGGATTTCTTTCTTGCTGTGGTCGCTGTCAGTAT 2156
consensus_13958#1      ------------------------------------------------------------
consensus_13958#2      ------------------------------------------------------------
                                                                                   

consensus_13958#0      CCTGCAAATCCATGTGATAGCATCATACCAATG 2189
consensus_13958#1      ---------------------------------
consensus_13958#2      ---------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)