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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13987#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2014 fasta sequence
[TTGCGTTGCGTCTCCTCCTCCCGCACGGCTCGCTCCCTGCCCACTCCTCCTCCTCTCCTCTCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGCCTTCGTTCTTCCTCCGCCTTGCCCTTCCCCGTACGTCCTGCTCTTGCGGAGGGAGGTGTTTCGCTCCGGTTCCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGTCTGGCAAACATAAAATATGGTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTTCCAATACTTTCATATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTTTACTTATTTGCTGGTTTTCTTGACAGATATTGGGCTTAGTCCAAGTGATGCTGCTGTTGTCATGCTTTCTGGTCAATTGGCAGATGGCTTCGCAACAATCTTCGTTGGAGAACTGATTGATCGCTTTGGACATTTTAAACTGTGGCATGCAGGAGGATCCATTTTAGTAGCAATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACGGGAACTATTTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTGGGCAGTTACTCAGGTCTCTCATATGTCAATGGTGAACTGCATGACATCAAACCCAACAAGTCGGGTTGCATTAGTAAGCTGCCGTAATGCCTTCACAATGATCGCAAATCTTAGCCTGTATGGCATTGCTTTGTTGATATTTAGTCTACGTCAGTCAGTGAGCGTGATAGTTCAGTATCGATGGATAGCATATGTGTCCATTGCCCTTGGATCTTGTTTCGTCGTTGTGTTCTTGATTGGAACGGAAGAGCCAGGGTTAAATCAGCATTGCCAGAATAAGAGACTTTCCAGGATTTCATGGACCCACTGGTTCAAGAAAGTATTGTACTACCAAGTTGCTCTAGTATACATGTTTACTAGATTGGTTACCAATGTTTCACAGGCACTTCTTGCTTTCTACGTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTGGAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGCTATTTTTACTAAAATAATGAATTGGTCTTTTTATTGCTCGCATTTAAAAAAAAAAAAAAAAAA]
[+] EMBL AK070952 [TTGCGTTGCGTCTCCTCCTCCCGCACGGCTCGCTCCCTGCCCACTCCTCCTCCTCTCCTCTCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGCCTTCGTTCTTCCTCCGCCTTGCCCTTCCCCGTACGTCCTGCTCTTGCGGAGGGAGGTGTTTCGCTCCGGTTCCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGTCTGGCAAACATAAAATATGGTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTTCCAATACTTTCATATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTTTACTTATTTGCTGGTTTTCTTGACAGATATTGGGCTTAGTCCAAGTGATGCTGCTGTTGTCATGCTTTCTGGTCAATTGGCAGATGGCTTCGCAACAATCTTCGTTGGAGAACTGATTGATCGCTTTGGACATTTTAAACTGTGGCATGCAGGAGGATCCATTTTAGTAGCAATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACGGGAACTATTTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTGGGCAGTTACTCAGGTCTCTCATATGTCAATGGTGAACTGCATGACATCAAACCCAACAAGTCGGGTTGCATTAGTAAGCTGCCGTAATGCCTTCACAATGATCGCAAATCTTAGCCTGTATGGCATTGCTTTGTTGATATTTAGTCTACGTCAGTCAGTGAGCGTGATAGTTCAGTATCGATGGATAGCATATGTGTCCATTGCCCTTGGATCTTGTTTCGTCGTTGTGTTCTTGATTGGAACGGAAGAGCCAGGGTTAAATCAGCATTGCCAGAATAAGAGACTTTCCAGGATTTCATGGACCCACTGGTTCAAGAAAGTATTGTACTACCAAGTTGCTCTAGTATACATGTTTACTAGATTGGTTACCAATGTTTCACAGGCACTTCTTGCTTTCTACGTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTGGAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGCTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGCTATTTTTACTAAAATAATGAATTGGTCTTTTT ]
[+] EMBL CB643664 [ GCGTCCCCTCCTCCCGCACGGCTCGCTCCCTGCCCACTCCTCCTCCTCTCCTCTCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGCCTTCGTTCTTCCTCCGCCTTGCCCTTCCCCGTACGTCCTGCTCTTGCGGAGGGAGGTGTTTCGCTCCGGTTCCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGTCTGGCAAACATAAAATATGGTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTTCCAATACTTTCATATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTTTACTTATTTGCTGGTTTTCTTGACAGATATTGGGCTTAGTCCAAGTGATGCTGCTGTTGTCATGCTTTCTGGTCAATTGGCAGATGGCTTCGCAACAATCTTCGTTGGAGAACTGATTGATCGCTTTGGACATTTTAAACTGTGGCATGCAGGAGGATCCATTTTAGTAGCAATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACGGGAACTATTTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTGGGCAGTTACTCAGGTCTCTCATATGTCAATGGTGAACTGCATGACATCAAACCCAACAAGTCGGGTTGCATTAGTAAGCTGCCGTAATGCCTTCACAATGATCGCAAATCTTAGCCTGTATGGCATTGCTTTGTTGATATTTAGTCTACGTCAGTCAGTGAGCGTGATAGTTCAGTATCGATGGATAGCATATGTGTCCA ]
[+] EMBL CB636096 [ CGCTCCCTGCCCACTCCTCCTCCTCTCCTCTCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGCCTTCGTTCTTCCTCCGCCTTGCCCTTCCCCGTACGTCCTGCTCTTGCGGAGGGAGGTGTTTCGCTCCGGTTCCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGTCTGGCAAACATAAAATATGGTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTTCCAATACTTTCATATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTTTACTTATTTGCTGGTTTTCTTGACAGATATTGGGCTTAGTCCAAGTGATGCTGCTGTTGTCATGCTTTCTGGTCAATTGGCAGATGGCTTCGCAACAATCTTCGTTGGAGAACTGATTGATCGCTTTGGACATTTTAAACTGTGGCATGCAGGAGGATCCATTTTAGTAGCAATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACGGGAACTATTTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGT ]
[+] EMBL CB635245 [ TGTACTACCAAGTTGCTCTAGTATACATGTTTACTAGATTGGTTACCAATGTTTCACAGGCACTTCTTGCTTTCTACGTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTGGAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGAAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAAT ]
[+] EMBL CB635217 [ TGTACCATTAAGTTGCTCTAGTATACATGTTTACTAGATTGGTTACCAATGTTTCACAGGCACTTCTTGCTTTCTACCTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTGGAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGAAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAA ]
[-] EMBL CB652072 [ GCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAAAGATTTTTACTAAAATAATGA ]
[-] EMBL CB643665 [ CTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGCTATTTTTACTAAAATAAGGAATTGGTCTTTTTATTGCT ]
[-] EMBL CB663168 [ CAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTTCCAATCCCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCACCGGCCAATGACTCCTCTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTCCCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGCTATTTTTACTAAAATAATGAATT ]
[+] EMBL AU056170 [ GAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCG ]
[+] EMBL AU056171 [ AGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGCTATTTTTACTAAAATAATGAATTGGTCTTTTTAATTTTCGCATTTAAAAAAAAAAAAAAAAAA]
[-] EMBL CB635218 [ GCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGCTATTTTTTTTAAGGTAATGAATTGGTCTTTTTATTGC ]
[-] EMBL CB636097 [ TGCAACTGTAGATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAAAAAAATCCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGAATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATTTAGGTATTTTTACTAAAATAATGAATTGagt ]
consensusID : consensus_13987#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 813 fasta sequence
[ACTATAACGTTTCTGTATTTGGTCAGGCACTTCTTGCTTTCTACGTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTGGAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCA]
[+] EMBL CB663167 [ACTATAACGTTTCTGTATTTGGTCAGGCACTTCTTGCTTTCTACGTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTGGAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATTCAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAATAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCGCATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTCCACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCA]
consensusID : consensus_13987#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 771 fasta sequence
[TCCCGCACTGTTTGCTCCCTGCCCACTCCTCCTCCTCTCCTCTCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGCCTTCGTTCTTCCTCCGCCTTGGCCTTCCCCGTACGTCCTGCTCTTGCGGAGGGAGGTGTTTCGCTCCGGTTCCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGTCTGGCAAACATAAAATATGGTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTTCCAATACTTTCATATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTTTACTTATTTGCTGGTTTTCTTGACAGATATTGGGCTTAGTCCAAGTGATGCTGCTGTTGTCGTGCTTTCTGGTCAATTGGCAGATGGCTTCGCAACAATCTTCGGTGGAGAACTGGAGGATCCATTTTAGTAGCAATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACGGGAACTATTTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTGGGCAGTTACTCAGGTCAATGGTGAACTGCATGACATCAAACCCAACAAGTCGGGTTGCATTACTAAGCTGCCGATATGCCTTCACGATGATCGAAAATCTTAGCCTGTATGGCATTGCTTTGTTGATATTTAGTCTACGTCAGTCAGTGAGCGTGATAGTTCAGTATCGATGGATAGCATATGTGTCCA]
[+] EMBL CB652071 [TCCCGCACTGTTTGCTCCCTGCCCACTCCTCCTCCTCTCCTCTCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGCCTTCGTTCTTCCTCCGCCTTGGCCTTCCCCGTACGTCCTGCTCTTGCGGAGGGAGGTGTTTCGCTCCGGTTCCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGTCTGGCAAACATAAAATATGGTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTTCCAATACTTTCATATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTTTACTTATTTGCTGGTTTTCTTGACAGATATTGGGCTTAGTCCAAGTGATGCTGCTGTTGTCGTGCTTTCTGGTCAATTGGCAGATGGCTTCGCAACAATCTTCGGTGGAGAACTGGAGGATCCATTTTAGTAGCAATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACGGGAACTATTTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTGGGCAGTTACTCAGGTCAATGGTGAACTGCATGACATCAAACCCAACAAGTCGGGTTGCATTACTAAGCTGCCGATATGCCTTCACGATGATCGAAAATCTTAGCCTGTATGGCATTGCTTTGTTGATATTTAGTCTACGTCAGTCAGTGAGCGTGATAGTTCAGTATCGATGGATAGCATATGTGTCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13987#0 TTGCGTTGCGTCTCCTCCTCCCGCACGGCTCGC-TCCCTGCCCA--CTCCTCCTCCTCTC 57
consensus_13987#2 ------------------TCCCGCACTGTTTGC-TCCCTGCCCA--CTCCTCCTCCTCTC 39
consensus_13987#1 -------------------ACTATAACGTTTCTGTATTTGGTCAGGCACTTCTTGCTTTC 41
* * * * * ** ** * * ** * ** **
consensus_13987#0 CTC-TCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGC--CTTCGTTCTTCC 114
consensus_13987#2 CTC-TCCTCCTCCTGCTGCCGTCCACGCGACACCACCGAGCGTCGC--CTTCGTTCTTCC 96
consensus_13987#1 TACGTCATAAATGATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATC 101
* ** * ** * * * * *** * * * * * * *
consensus_13987#0 TCCGCCTTGCCCTTCCCCGTACGTCCTGCTCTTGCGGAGGG-AGGTGTTTCGCTCCGGTT 173
consensus_13987#2 TCCGCCTTGGCCTTCCCCGTACGTCCTGCTCTTGCGGAGGG-AGGTGTTTCGCTCCGGTT 155
consensus_13987#1 TATGTCTGCAGCTTGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGT 161
* * ** *** *** * * *** ** ** * * * *
consensus_13987#0 CCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGT-CTGGCAAACAT--AAAATATG 230
consensus_13987#2 CCTCGCCGTAGCAGCAGCAGCGAGGTGATACCTTTAGT-CTGGCAAACAT--AAAATATG 212
consensus_13987#1 TTAAAAAATTACTTTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTT 221
* * * ** ** * ** * ** * * ** * *
consensus_13987#0 GTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTT 290
consensus_13987#2 GTTAAGATAATGGATAATCAGTCATCGATTGAAGAACTGGATGAACCATTAGGGAGAGTT 272
consensus_13987#1 GTTCTACCAAGTGGAATGCACAACTTCATGTATGCACT--ATCAATCACAATAGGAGTTG 279
*** ** * * ** * ** * * *** ** ** ** * * *
consensus_13987#0 CCAATACTTTCAT-ATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTT 349
consensus_13987#2 CCAATACTTTCAT-ATGGTTCTGGGCATATGCTAAATGACATCACTTCTTCATGTTGGTT 331
consensus_13987#1 CCAATGCTCTTATGACAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATC 339
***** ** * ** * ** * ** ** * * * ** * *
consensus_13987#0 TACTTATTTGCTGGTTTTCTTGACAGAT-ATTGGGCTTAGT---CCAAGTG--ATGCTG- 402
consensus_13987#2 TACTTATTTGCTGGTTTTCTTGACAGAT-ATTGGGCTTAGT---CCAAGTG--ATGCTG- 384
consensus_13987#1 TAAATGGTTG-TGCTTTTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGA 398
** * *** ** **** * * * * *** * ** ** * ***** **** *
consensus_13987#0 CTGTTGTCATGCTTTCTGGTCAATTGGCA-GATGGCTTCGCAACAATCTTCGTTGGAGAA 461
consensus_13987#2 CTGTTGTCGTGCTTTCTGGTCAATTGGCA-GATGGCTTCGCAACAATCTTCGGTGGAGAA 443
consensus_13987#1 CTAGCTCTGTATATTCTTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAG 458
** * **** * * ** * * * ** * ***
consensus_13987#0 CTGATTGATCGCTTTGGACATTTTAAACTGTGGCATGCAGGAGGATCCATTTTAGTAGCA 521
consensus_13987#2 CTG-------------------------------------GAGGATCCATTTTAGTAGCA 466
consensus_13987#1 TTGGCATTTGGTTATTCAGTTA------------------CAAGACTTGGTTTGGGGTTA 500
** * ** *** * *
consensus_13987#0 ATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACG----GGAACTAT 577
consensus_13987#2 ATTTCCTTCTCATCTGTTTTTGGTAGCTGTTTGCCTTGCAAACTTACG----GGAACTAT 522
consensus_13987#1 G--TCCCAGCTGCCTGTTC---ACTGCTCTCAGCCATAATAGCTTATACGATGGACCTAC 555
*** ***** *** * *** * * **** *** ***
consensus_13987#0 TTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTG 637
consensus_13987#2 TTCATCTACAATGGAGACTGTTGGATATAGCACATTCGCTGCTATTTTCAATGTTGGCTG 582
consensus_13987#1 CTGACACTCGGCGAAGACCTTTAGTTG-AACCTCTTCTCGCATAACTCTGCTGGTAGCAC 614
* * * * **** ** * * * * *** * ** * ** * **
consensus_13987#0 GGCAGTTACTCAGGTCTCTCATATGTCAATGGTGAACTGC--ATGACATCAAACCCAACA 695
consensus_13987#2 GGCAGTTACTCAGGTC-----------AATGGTGAACTGC--ATGACATCAAACCCAACA 629
consensus_13987#1 TTCCATTGCAACTGTATA---------TATGTCCAACGGCCAATGACTCCACTGCTGGAG 665
* ** * ** *** *** ** ***** ** *
consensus_13987#0 AGTCGGGTTGCATTAGTAAGCTGCCGTAATGCC-TTCACAATGATCGCAAATCTTAGCCT 754
consensus_13987#2 AGTCGGGTTGCATTACTAAGCTGCCGATATGCC-TTCACGATGATCGAAAATCTTAGCCT 688
consensus_13987#1 GCTGGAGCTAT-TAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAACTCGGACATT 724
* * * * * * * * * * ** * ** * ** * ** ** * *
consensus_13987#0 GTA---TGGCATTGCTTTG--TTGATATT-TAGTCTACGTCAGTCAGTGAGC-GTGATAG 807
consensus_13987#2 GTA---TGGCATTGCTTTG--TTGATATT-TAGTCTACGTCAGTCAGTGAGC-GTGATAG 741
consensus_13987#1 GTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGACACAGTGAAAG 784
** * *** *** *** *** * ** ** * * * **** **
consensus_13987#0 TTCAGTATCGATGGATAGCATATGTGTCCATTGCCCTTGGATCTTGTTTCGTCGTTGTGT 867
consensus_13987#2 TTCAGTATCGATGGATAGCATATGTGTCCA------------------------------ 771
consensus_13987#1 GTACTCAGCAACGAGTTGAGTATGTACCA------------------------------- 813
* * * * * * * ***** *
consensus_13987#0 TCTTGATTGGAACGGAAGAGCCAGGGTTAAATCAGCATTGCCAGAATAAGAGACTTTCCA 927
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 GGATTTCATGGACCCACTGGTTCAAGAAAGTATTGTACTACCAAGTTGCTCTAGTATACA 987
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TGTTTACTAGATTGGTTACCAATGTTTCACAGGCACTTCTTGCTTTCTACGTCATAAATG 1047
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 ATTTGGAAATGCCACAATCATCCAAAGCATTGGTACCTGCTATTATCTATGTCTGCAGCT 1107
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TGATAGTATCTGTCATATTACAGGAAACTAGATGGTCAAGTTGGCGTTTAAAAAATTACT 1167
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TTTCTGCTGGGGCCATGCTTTGGATATTGTCTGGTGTTGGAATTGTTGTTCTACCAAGTG 1227
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 GAATGCACAACTTCATGTATGCACTATCAATCACAATAGGAGTTGCCAATGCTCTTATGA 1287
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 CAGTAACAAGTATCAGCATGGAAGGAATTTTAGTAGGTGAAGATCTAAATGGTTGTGCTT 1347
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TTGTGTATGGCTCATTAAGTTTTGTTGACAAAGTGTCATGCGGACTAGCTCTGTATATTC 1407
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TTGAGTCCTATCAAGGAAGTACCAATACCAGACAGAACCTAGAGTTGGCATTTGGTTATT 1467
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 CAGTTACAAGACTTGGTTTGGGGTTAGTCCCAGCTGCCTGTTCACTGCTCTCAGCCATAA 1527
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TAGCTTATACGATGGACCTACCTGACACTCGGCGAAGACCTTTAGTTGAACCTCTTCTCG 1587
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 CATAACTCTGCTGGTAGCACTTCCATTGCAACTGTATATATGTCCAACGGCCAATGACTC 1647
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 CACTGCTGGAGGCTGGAGCTATTAACAACAGTACAGTTATACGACTCGAAAGGAAAGAAA 1707
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 CTCGGACATTGTCAATTCATTTTGACTTGGTCTGAAATTCTGAATTAAGTTATAGATGAC 1767
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 ACAGTGAAAGGTACTCAGCAACGAGTTGAGTATGTACCAAAAGTAGCATGGGAGTACAAT 1827
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 CCTGTGTAAGTTAATCCAAAATCCCCTTACAAATGTAGCCTAGCCGCATTGTTCACAAGA 1887
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 ATACATAGCTTGTATGCTAATTTTATATTTATTCGCTTTGGATGTAATTGAATTACCATT 1947
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 TAGCTATTTTTACTAAAATAATGAATTGGTCTTTTTATTGCTCGCATTTAAAAAAAAAAA 2007
consensus_13987#2 ------------------------------------------------------------
consensus_13987#1 ------------------------------------------------------------
consensus_13987#0 AAAAAAA 2014
consensus_13987#2 -------
consensus_13987#1 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||