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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14001#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2278 fasta sequence
[CCCTTCTCCATAGAAACCGTGTCCCTCCCCTACCTTACCCATCCCCCCCGCTCCTCCCCTTCCCGATCAACAGCAACAGCGGCGGTCAAAAGCTTCCCCCCGCGACGACCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA-CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC-TCGAGCGCATCCGCCAGGT-CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG-TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG--C-----TTTATCGAGAACTAT-GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAAGCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCCAGTACCACCAGGTATTGCTGGTCAACATAGAAAGGAGCCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT-GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT-GGTTTTTAATGTAACATCATAT-GGATTCGTGC-TTCTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT-GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC-AGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATGCTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATTTTATGGTGGTTAAAAAAAAAAAAAAAAAAAAGA]
[+] EMBL AK072413 [CCCTTCTCCATAGAAACCGTGTCCCTCCCCTACCTTACCCATCCCCCCCGCTCCTCCCCTTCCCGATCAACAGCAACAGCGGCGGTCAAAAGCTTCCCCCCGCGACGACCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGGGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG C TTTATCGAGAACTAT GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAAGCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCCAGTACCACCAGGTATTGCTGGTCAACATAGAAAGGAGCCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAAACGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTCTTGCTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAGTCGTCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGG ]
[+] EMBL C72864 [ AAAGCTTCCCCCCGCGACGACCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGANCTTGACCATCAACGGCGGCGTCCTCCGCGGGGTG CCCCCGACGTCGTGGTTGAAGAAGG CANGGCATCC TCGAGCGCATCCG CAAGT TCCGGGA CCCCAAACGATGAG CCGTTGTNTGCA ]
[+] EMBL CB639918 [ CCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTG ]
[+] EMBL AU055864 [ TAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCNCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCCTTCGAGCGCATCCGCCAGGTACCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAGTTACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACNCCGTGCCTCTGTTTAAAGTTAAGATAACGAATGGTGAATTGTTTCTGCATGAGAGCGTTAAACGCGCAATTCCACATAGTTGGGATTCTTCAGCATTGGCTAGGTCAGTAGTTTATCGGGAANTATGGGTANCCATATTATTACTTCTGTTACGGGTGGTGGga ]
[+] EMBL CB668217 [ CGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG C TTTATCGAGAACTAT GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATG ]
[+] EMBL AK071946 [ GAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG C TTTATCGAGAACTAT GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAAGCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCCAGTACCACCAGGTATTGCTGGTCAACATAGAAAGGAGCCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTCTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATGCTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATT ]
[+] EMBL AU082952 [ AGGA CCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTNCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCAaaaa ]
[+] EMBL CA764060 [ CAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGNTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTTGGGGGGTCGAGAA GGCAAGATTGNTGGTCGTGCNAAATACTCGGTATTAAACTATTGACCAAATGGTGNAAGCATTCATTCATTCACTCTGCTATGAAGCATNCTGGTTNAAGATAGCATATGGTCNTTTGGTCATCATGGATGGGTTTTTAATGGAACATCATATGGGATTCGGGCTTTNTTGGTGATTCTGGGANGGATTANCGCCTAAATGGTTTGGGTCCGANTACNAAAAATTTGACCTGGGCCCAANGGATCTGTTA ]
[-] EMBL CB668218 [ TTACAGACCTATATGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTTTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGCCCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTGTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTTTGTTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTTTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAATCATCTTTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATGCTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATTTTATGGTGGTTAAAAAAAAAAAAAAAAAAAAGA]
[+] EMBL AU055865 [ CATAGTCCATCAAGTNCTTTGGTCCATNGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCNCCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTCTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTAaaaaaaa ]
consensusID : consensus_14001#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 854 fasta sequence
[ACATTGGATGAAATATACTTTTGCTTGGAAGTTATGAAAAAGATAAAATAAAGTGTTTTTAAGACAATAAATTCTGAAACCAATGTAGCACATGCTAACATCCAATGAAATATATGCAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGC-ACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCA-TCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCA-TCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGAC-CTTGAAGGGCCCA-CAAGATGCACCTGGCC-CTTGGCTGGTAACAGGAGCAAAGTTGGGGGTCGAGAAGGGCAAGATTGTTGT-TCGTGCCAAAATACTCGTTATTAAACTATTGACCCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGT-AACATCATATGGATTCGTGCT----AAAAAAAAAAAAA]
[-] EMBL CB674525 [ACATTGGATGAAATATACTTTTGCTTGGAAGTTATGAAAAAGATAAAATAAAGTGTTTTTAAGACAATAAATTCTGAAACCAATGTAGCACATGCTAACATCCAATGAAATATATGCAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGC ACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCA TCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCA TCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGAC ATTGAAGGGCCCA CAAGATGCACCTGGCC ATTGGCTGGTAACAGGAGCAAAGTTGGGGGTCGAGAAGGGCAAGATTGTTGT TCGTG CAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGT AACATCAaaaaaaaga ]
[+] EMBL BI813535 [ TCTGGTGTTTATATTGTAACAGGAGCAACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACCATTAGGAGATCAGTGTGGGACCATAGTCCA TCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCA TCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGAC CTTGAAGGGCCCA CAAGATGCACCTGGCC CTTGGCTGGTAACAGGAGCCAAGTTGGGGGTCGAGAAGGGCAAGATTGTTGT TCGTGCCAAAATACTCGTTATTAAACTATTGACCCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGT AACATCATATGGATTCGTGCT AAAAAAAAAA ]
[+] EMBL BM420474 [ CAGTGTGGGACCATAGNCCAGNCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCAGTCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACACTTGAAGGGCCCACCAAGATGCACCTGGCCACTTGGCTGGTAACAGGAGCAAAGTT GGGGTCGAGAAGGGCAAGATTGTTGTCTCGTNCC AAATACTCGTTATTAAACTATTGACCCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAA CATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGTCAACATCATATGGATTCGTGCTTCTCAACAAAAAAAAAA]
consensusID : consensus_14001#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 789 fasta sequence
[GCTTTATCGAGAACTATGGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATGTAAGACACGCTTCTGATTCCCTTGTTTTGTCAGTATGCTCATAGTGTGCTTTGCCTACTTTTAACATATAGTTTAACCCCCTGAGCTGTTTTCCTAAAGCACTATCATTTCTGTATCAAAGTCCCTTTGTAGTTGGCCTTCGTGTTTTAGTAATGATCATCTTTTTTTCTTCTGTGATCAAGATCAACAGTTTTTCCCTACAATGACAAAGTTTAGTGTGACTAAGTTCATACGGTAGTGGTGCTTCACAAAGACAGTACTGTTACTGTGGATAACTGTTTTCCTGTGTCTTTTTTTTCTTTCTGTTGGACTGAGATATTTTCCTGGATAAATATATTACATGTTGGCTCTTCAATCATGCTGTTCTTTTTTCACTACAGACAAGCCCCANATTGAAGAGTTGCAGT]
[+] EMBL CB674524 [GCTTTATCGAGAACTATGGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATGTAAGACACGCTTCTGATTCCCTTGTTTTGTCAGTATGCTCATAGTGTGCTTTGCCTACTTTTAACATATAGTTTAACCCCCTGAGCTGTTTTCCTAAAGCACTATCATTTCTGTATCAAAGTCCCTTTGTAGTTGGCCTTCGTGTTTTAGTAATGATCATCTTTTTTTCTTCTGTGATCAAGATCAACAGTTTTTCCCTACAATGACAAAGTTTAGTGTGACTAAGTTCATACGGTAGTGGTGCTTCACAAAGACAGTACTGTTACTGTGGATAACTGTTTTCCTGTGTCTTTTTTTTCTTTCTGTTGGACTGAGATATTTTCCTGGATAAATATATTACATGTTGGCTCTTCAATCATGCTGTTCTTTTTTCACTACAGACAAGCCCCANATTGAAGAGTTGCAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14001#0 CCCTTCTCCATAGAAACCGTGTCCCTCCCCTACCTTACCCATCCCCCCCGCTCCTCCCCT 60
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 TCCCGATCAACAGCAACAGCGGCGGTCAAAAGCTTCCCCCCGCGACGACCCCCTCCACCT 120
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 TCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCG 180
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 GTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCG 240
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGA 300
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGA 360
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CGAGTCCCGCGCGCGGGACCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGA 420
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CGTCGTGGTGGAGGAGGGCCACGGCATCCTCGAGCGCATCCGCCAGGTCCCGGGACCCCC 480
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 AACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGC 540
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 GGGCTTGCTGGAAACAACAGTACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGG 600
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 TTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCC 660
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 TCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGC 720
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 AATTCCACATAGTTGGGATCCTTCAGCATTGGCTAGCTTTATCGAGAACTATGGTACCCA 780
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 TATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTC 840
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 ATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATT 900
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGAC 960
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 AGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAA 1020
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 AACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGT 1080
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAA 1140
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 GCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCC 1200
consensus_14001#1 --------------------------------------------ACATTGGATGAAATAT 16
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 AGTACCACCAGGTATTGCTGGTCAACATAGAA--AGGAGCCTGTATGTCCATCACTTC-- 1256
consensus_14001#1 ACTTTTGCTTGGAAGTTATGAAAAAGATAAAATAAAGTGTTTTTAAGACAATAAATTCTG 76
consensus_14001#2 --GCTTTATCGAGAACTATGGTACCCATATTAT----TACTTCTGTTACGGTTGGTGGTA 54
* * ** *** * * * * * *
consensus_14001#0 AGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTA 1316
consensus_14001#1 AAACCAATGTAGCACATGCTAA-CATCCAATGAAATATATGCAGATATCTGTTGGGCGTA 135
consensus_14001#2 AG---GATGAAGTATACATAAAGCAGC--ATTCCTCATCC-CAATTATCAG--AATTGGA 106
* * ** * * * ** **** * * *
consensus_14001#0 GACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTC 1376
consensus_14001#1 GACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTC 195
consensus_14001#2 GTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTT 166
* *** * * *** ** * *** **** * * ** * *
consensus_14001#0 ATTTGCAGCACCT-TGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATC 1435
consensus_14001#1 ATTTGCAGCACCT-TGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATC 254
consensus_14001#2 AAATGCAACTCCCATAAATTACAGTGAGAAGGATATG------ACAGTAATCTTCAGAAG 220
* **** * ** * * * * * ** ** ** * * ** ** *
consensus_14001#0 ACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTG----GTTTGA 1491
consensus_14001#1 ACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTG----GTTTGA 310
consensus_14001#2 GAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGC 280
* * * ** ** * ** ***** *** ** *
consensus_14001#0 ACCAA---TCAAGTGGAGGAATTTTGCTCATGTCAGCAC-TGCGCCCATAGAGTACACTG 1547
consensus_14001#1 ACCAA---TCAAGTGGAGGAATTTTGCTCATGTCAGCAC-TGCGCCCATAGAGTACACTG 366
consensus_14001#2 ACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGG 340
**** *** * * ** *** * * ** * * * * * * * *
consensus_14001#0 AAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAAC-TGGGCGTG 1606
consensus_14001#1 AAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAAC-TGGGCGTG 425
consensus_14001#2 AAAGAAGCACC-----TCGCTCGTGCAATTGAACTTTATTTGAAATGTAAGACACGCTTC 395
*** *** * * ** * ** * * ** * * ** ** *
consensus_14001#0 TGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGA 1666
consensus_14001#1 TGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGA 485
consensus_14001#2 TGATTCCCTTGTTTTGTCAGTATGCTC-ATAGTGTGCTTTGCCTACTTTTAACATATAGT 454
** * ** *** * *** ** * ** * * * * *
consensus_14001#0 TGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACA 1726
consensus_14001#1 TGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTGCATAGGACA 545
consensus_14001#2 T---TAACCCCCTGAGCTGTTT----TCCTAAAGCACTATCATTTCTGTATCAAAGTCCC 507
* ** ** * ** * * ** ** * * * ** ** ** *
consensus_14001#0 GATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACC 1786
consensus_14001#1 GATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACC 605
consensus_14001#2 TTTGTAG-TTGGCCTTCGTGTTTTAGTAATGATCATCTTTT-----TTTCTTCTGTGATC 561
** ** ** * ** * * * ***** * * *** * ** * *** *
consensus_14001#0 GAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGA-GCAAAGTT 1845
consensus_14001#1 GAGACCTTGAAGGGCCCACAAGATGCACCTGGCCCTTGGCTGGTAACAGGA-GCAAAGTT 664
consensus_14001#2 AAGATCAACAGTTTTTCCCTACAATGACAAAGTTTAGTGTGACTAAGTTCATACGGTAGT 621
*** * * * * * ** * * *** * * *
consensus_14001#0 GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGC-AAAATACTCGTTATTAAACTATTGAC 1904
consensus_14001#1 GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCCAAAATACTCGTTATTAAACTATTGAC 724
consensus_14001#2 GGTGCTTCACAAAGACAGTACTGTTACT-GTG----GATAACTGTTTTC------CTGTG 670
** * * * ** * ** * **** * *** *** *** * **
consensus_14001#0 CAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCA 1964
consensus_14001#1 CCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCA 784
consensus_14001#2 TCTTTTTT-------TTCTTTCTGTTGGACTGAGAT--ATTTTCCTGGATAAATATATTA 721
* ** *** *** * *** ** * ***** **** *** *
consensus_14001#0 TATGTTCTTTTGTTCATCATGTATGGTTTTTAATGTAACATCATATGGATTCGTGCTTCT 2024
consensus_14001#1 TATGTTCTTTTGTTCATCATGTATGGTTTTTAATGTAACATCATATGGATTCGTGCTAAA 844
consensus_14001#2 CATGTTGGCTCTTCAATCATGC-TGTTCTTT--TTTCACTACAGACAAGCCCCANATTGA 778
***** * * ****** ** * *** * * ** ** * * *
consensus_14001#0 TGTTGATTCTGTGAGGGATTAGCGCCTAGATGTTTGTGTCCGATTACAAAATATTTGACC 2084
consensus_14001#1 AAAAAAAAAA-------------------------------------------------- 854
consensus_14001#2 AGAGTTGCAGT------------------------------------------------- 789
consensus_14001#0 TGGTCTCAGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAA 2144
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 ATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATG 2204
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 CTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATTTTATGGTGGTTAAAAAAAA 2264
consensus_14001#1 ------------------------------------------------------------
consensus_14001#2 ------------------------------------------------------------
consensus_14001#0 AAAAAAAAAAAAGA 2278
consensus_14001#1 --------------
consensus_14001#2 --------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||