These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14001#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2278 fasta sequence [CCCTTCTCCATAGAAACCGTGTCCCTCCCCTACCTTACCCATCCCCCCCGCTCCTCCCCTTCCCGATCAACAGCAACAGCGGCGGTCAAAAGCTTCCCCCCGCGACGACCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA-CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC-TCGAGCGCATCCGCCAGGT-CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG-TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG--C-----TTTATCGAGAACTAT-GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAAGCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCCAGTACCACCAGGTATTGCTGGTCAACATAGAAAGGAGCCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT-GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT-GGTTTTTAATGTAACATCATAT-GGATTCGTGC-TTCTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT-GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC-AGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATGCTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATTTTATGGTGGTTAAAAAAAAAAAAAAAAAAAAGA] [+] EMBL AK072413 [CCCTTCTCCATAGAAACCGTGTCCCTCCCCTACCTTACCCATCCCCCCCGCTCCTCCCCTTCCCGATCAACAGCAACAGCGGCGGTCAAAAGCTTCCCCCCGCGACGACCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGGGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG C TTTATCGAGAACTAT GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAAGCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCCAGTACCACCAGGTATTGCTGGTCAACATAGAAAGGAGCCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAAACGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTCTTGCTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAGTCGTCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGG ] [+] EMBL C72864 [ AAAGCTTCCCCCCGCGACGACCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGANCTTGACCATCAACGGCGGCGTCCTCCGCGGGGTG CCCCCGACGTCGTGGTTGAAGAAGG CANGGCATCC TCGAGCGCATCCG CAAGT TCCGGGA CCCCAAACGATGAG CCGTTGTNTGCA ] [+] EMBL CB639918 [ CCCCCTCCACCTTCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTG ] [+] EMBL AU055864 [ TAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCNCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCCTTCGAGCGCATCCGCCAGGTACCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAGTTACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACNCCGTGCCTCTGTTTAAAGTTAAGATAACGAATGGTGAATTGTTTCTGCATGAGAGCGTTAAACGCGCAATTCCACATAGTTGGGATTCTTCAGCATTGGCTAGGTCAGTAGTTTATCGGGAANTATGGGTANCCATATTATTACTTCTGTTACGGGTGGTGGga ] [+] EMBL CB668217 [ CGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG C TTTATCGAGAACTAT GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATG ] [+] EMBL AK071946 [ GAGTCGCCTTCCCCTCCTCCGGTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCGCATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGACGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGACGAGTCCCGCGCGCGGGA CCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGACGTCGTGGTGGAGGAGGGCCACGGCATCC TCGAGCGCATCCGCCAGGT CCCGGGACCCCCAACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGCGGGCTTGCTGGAAACAACAG TACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGGTTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCCTCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGCAATTCCACATAGTTGGGATCCTTCAGCATTGGCTAG C TTTATCGAGAACTAT GGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAAGCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCCAGTACCACCAGGTATTGCTGGTCAACATAGAAAGGAGCCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTCTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATGCTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATT ] [+] EMBL AU082952 [ AGGA CCTGTATGTCCATCACTTCAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTNCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCAaaaa ] [+] EMBL CA764060 [ CAGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGNTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTTGGGGGGTCGAGAA GGCAAGATTGNTGGTCGTGCNAAATACTCGGTATTAAACTATTGACCAAATGGTGNAAGCATTCATTCATTCACTCTGCTATGAAGCATNCTGGTTNAAGATAGCATATGGTCNTTTGGTCATCATGGATGGGTTTTTAATGGAACATCATATGGGATTCGGGCTTTNTTGGTGATTCTGGGANGGATTANCGCCTAAATGGTTTGGGTCCGANTACNAAAAATTTGACCTGGGCCCAANGGATCTGTTA ] [-] EMBL CB668218 [ TTACAGACCTATATGGTGTTTATATTGTAACAGGAGCACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTTTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGCCCATAGTCCATCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCATCCTGTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTTTGTTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTTTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAATCATCTTTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATGCTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATTTTATGGTGGTTAAAAAAAAAAAAAAAAAAAAGA] [+] EMBL AU055865 [ CATAGTCCATCAAGTNCTTTGGTCCATNGGACAGATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACATTGAAGGGCCCACAAGATGCNCCTGGCCATTGGCTGGTAACAGGAGCAAAGTT GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTAT GGTTTTTAATGTAACATCATAT GGATTCGTGC TTCTTGTTGATTCTGTGAGGGATTAGCGCCTAGAT GTTTGTGTCCGATTACAAAATATTTGACCTGGTCTC AGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAAATTTTTGAATTGGTATTTTGTTAaaaaaaa ] consensusID : consensus_14001#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 854 fasta sequence [ACATTGGATGAAATATACTTTTGCTTGGAAGTTATGAAAAAGATAAAATAAAGTGTTTTTAAGACAATAAATTCTGAAACCAATGTAGCACATGCTAACATCCAATGAAATATATGCAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGC-ACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCA-TCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCA-TCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGAC-CTTGAAGGGCCCA-CAAGATGCACCTGGCC-CTTGGCTGGTAACAGGAGCAAAGTTGGGGGTCGAGAAGGGCAAGATTGTTGT-TCGTGCCAAAATACTCGTTATTAAACTATTGACCCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGT-AACATCATATGGATTCGTGCT----AAAAAAAAAAAAA] [-] EMBL CB674525 [ACATTGGATGAAATATACTTTTGCTTGGAAGTTATGAAAAAGATAAAATAAAGTGTTTTTAAGACAATAAATTCTGAAACCAATGTAGCACATGCTAACATCCAATGAAATATATGCAGATATCTGTTGGGCGTAGACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATCACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTGGTTTGAACCAATCAAGTGGAGGAATTTTGCTCATGTCAGCACTGCGCCCATAGAGTACACTGAAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGC ACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACAATTAGGAGATCAGTGTGGGACCATAGTCCA TCAAGTTCTTTGGTCCATAGGACAGATGAAGCTTCATCA TCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGAC ATTGAAGGGCCCA CAAGATGCACCTGGCC ATTGGCTGGTAACAGGAGCAAAGTTGGGGGTCGAGAAGGGCAAGATTGTTGT TCGTG CAAAATACTCGTTATTAAACTATTGACCAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGT AACATCAaaaaaaaga ] [+] EMBL BI813535 [ TCTGGTGTTTATATTGTAACAGGAGCAACAACTGGGCGTGTGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGATGCACCATTAGGAGATCAGTGTGGGACCATAGTCCA TCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCA TCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGAC CTTGAAGGGCCCA CAAGATGCACCTGGCC CTTGGCTGGTAACAGGAGCCAAGTTGGGGGTCGAGAAGGGCAAGATTGTTGT TCGTGCCAAAATACTCGTTATTAAACTATTGACCCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGT AACATCATATGGATTCGTGCT AAAAAAAAAA ] [+] EMBL BM420474 [ CAGTGTGGGACCATAGNCCAGNCAAGTTCTTTGGTGCATAGGACAGATGAAGCTTCATCAGTCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACCGAGACACTTGAAGGGCCCACCAAGATGCACCTGGCCACTTGGCTGGTAACAGGAGCAAAGTT GGGGTCGAGAAGGGCAAGATTGTTGTCTCGTNCC AAATACTCGTTATTAAACTATTGACCCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAA CATCCTGTTTAAAGATAGCATATGTTCTTTTGTTCATCATGTATGGTTTTTAATGTCAACATCATATGGATTCGTGCTTCTCAACAAAAAAAAAA] consensusID : consensus_14001#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 789 fasta sequence [GCTTTATCGAGAACTATGGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATGTAAGACACGCTTCTGATTCCCTTGTTTTGTCAGTATGCTCATAGTGTGCTTTGCCTACTTTTAACATATAGTTTAACCCCCTGAGCTGTTTTCCTAAAGCACTATCATTTCTGTATCAAAGTCCCTTTGTAGTTGGCCTTCGTGTTTTAGTAATGATCATCTTTTTTTCTTCTGTGATCAAGATCAACAGTTTTTCCCTACAATGACAAAGTTTAGTGTGACTAAGTTCATACGGTAGTGGTGCTTCACAAAGACAGTACTGTTACTGTGGATAACTGTTTTCCTGTGTCTTTTTTTTCTTTCTGTTGGACTGAGATATTTTCCTGGATAAATATATTACATGTTGGCTCTTCAATCATGCTGTTCTTTTTTCACTACAGACAAGCCCCANATTGAAGAGTTGCAGT] [+] EMBL CB674524 [GCTTTATCGAGAACTATGGTACCCATATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTCATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGACAGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATGTAAGACACGCTTCTGATTCCCTTGTTTTGTCAGTATGCTCATAGTGTGCTTTGCCTACTTTTAACATATAGTTTAACCCCCTGAGCTGTTTTCCTAAAGCACTATCATTTCTGTATCAAAGTCCCTTTGTAGTTGGCCTTCGTGTTTTAGTAATGATCATCTTTTTTTCTTCTGTGATCAAGATCAACAGTTTTTCCCTACAATGACAAAGTTTAGTGTGACTAAGTTCATACGGTAGTGGTGCTTCACAAAGACAGTACTGTTACTGTGGATAACTGTTTTCCTGTGTCTTTTTTTTCTTTCTGTTGGACTGAGATATTTTCCTGGATAAATATATTACATGTTGGCTCTTCAATCATGCTGTTCTTTTTTCACTACAGACAAGCCCCANATTGAAGAGTTGCAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14001#0 CCCTTCTCCATAGAAACCGTGTCCCTCCCCTACCTTACCCATCCCCCCCGCTCCTCCCCT 60 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 TCCCGATCAACAGCAACAGCGGCGGTCAAAAGCTTCCCCCCGCGACGACCCCCTCCACCT 120 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 TCCCCCAACCGCCCTCGTAGTCTCCGCGCGCAGGCAGCAGAGTCGCCTTCCCCTCCTCCG 180 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 GTCGATGCGACGGAGCTGAATCGGCCAGGATCCCGAGGAGGAGGAGGAGCGGACGGCCCG 240 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CATGAGCCTCGCTGGCTCCGCCCTGGAGGCGGCCCTGCAGGCGGTGGGGCGCGGCCTCGA 300 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CGCCGCCGGTGACCACCGGCTGCTCTACTGCAAGGGCACTGGGAGGCTCCTGATGCTGGA 360 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CGAGTCCCGCGCGCGGGACCTGACCATCAACGGCGGCGTCCTCCGCGGGGTGCCCCCCGA 420 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CGTCGTGGTGGAGGAGGGCCACGGCATCCTCGAGCGCATCCGCCAGGTCCCGGGACCCCC 480 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 AACCGATGAGCCCGTCGTCTGCAGCTTCCCGAAGATGGCTGAGTGCTTCAACAGGAAGGC 540 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 GGGCTTGCTGGAAACAACAGTACCGCTGGGTTCCTTCAACTCTCTCTTCAGCTTTACTGG 600 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 TTCTTGGAAGAATGATGAAGCGGCGACGAAATCCCTCGCGATTGATGGCTACTCCGTGCC 660 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 TCTGTTTAAAGTTAAGATAACGAGTGGTGAATTGTTTCTGCATGAGAGCGTTAAGCGCGC 720 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 AATTCCACATAGTTGGGATCCTTCAGCATTGGCTAGCTTTATCGAGAACTATGGTACCCA 780 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 TATTATTACTTCTGTTACGGTTGGTGGTAAGGATGAAGTATACATAAAGCAGCATTCCTC 840 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 ATCCCAATTATCAGAATTGGAGTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATT 900 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CTCAGATGGGGATAGCAAGTTAAATGCAACTCCCATAAATTACAGTGAGAAGGATATGAC 960 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 AGTAATCTTCAGAAGGAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAA 1020 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 AACTGTTCAGTCAGCACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGT 1080 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CGGTGATATGCCTGGAAAGAAGCACCTCGCTCGTGCAATTGAACTTTATTTGAAATACAA 1140 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 GCCCCAAATTGAAGAGTTGCAGTATTTCTTGGATTTCCAAGTTCAACTAGTTTGGGCTCC 1200 consensus_14001#1 --------------------------------------------ACATTGGATGAAATAT 16 consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 AGTACCACCAGGTATTGCTGGTCAACATAGAA--AGGAGCCTGTATGTCCATCACTTC-- 1256 consensus_14001#1 ACTTTTGCTTGGAAGTTATGAAAAAGATAAAATAAAGTGTTTTTAAGACAATAAATTCTG 76 consensus_14001#2 --GCTTTATCGAGAACTATGGTACCCATATTAT----TACTTCTGTTACGGTTGGTGGTA 54 * * ** *** * * * * * * consensus_14001#0 AGTTTAGTTTGATGGGCCCAAAGCTCTTTGTTAGCACTGAACAGATATCTGTTGGGCGTA 1316 consensus_14001#1 AAACCAATGTAGCACATGCTAA-CATCCAATGAAATATATGCAGATATCTGTTGGGCGTA 135 consensus_14001#2 AG---GATGAAGTATACATAAAGCAGC--ATTCCTCATCC-CAATTATCAG--AATTGGA 106 * * ** * * * ** **** * * * consensus_14001#0 GACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTC 1376 consensus_14001#1 GACCAGTCACTGGTCTGAAGCTATGCCTGGAAGGAGCCAAACAGAATCGTCTGGCTATTC 195 consensus_14001#2 GTTCAGAAATTACGTCAAAGAAATTGGAAGCGAGAGATTCTCAGATGGGGATAGCAAGTT 166 * *** * * *** ** * *** **** * * ** * * consensus_14001#0 ATTTGCAGCACCT-TGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATC 1435 consensus_14001#1 ATTTGCAGCACCT-TGGCTCATTGCCAAAAATATTTGTACCTCATTGGGATTCCCATATC 254 consensus_14001#2 AAATGCAACTCCCATAAATTACAGTGAGAAGGATATG------ACAGTAATCTTCAGAAG 220 * **** * ** * * * * * ** ** ** * * ** ** * consensus_14001#0 ACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTG----GTTTGA 1491 consensus_14001#1 ACAATTGGACCGCCAAAGTGGCAAGGCCCTGAAGAGCAGGATAGCCGCTG----GTTTGA 310 consensus_14001#2 GAGGGGTGGTTGTGATCTTGTTCAGAATTTTAATGATTGGATAAAAACTGTTCAGTCAGC 280 * * * ** ** * ** ***** *** ** * consensus_14001#0 ACCAA---TCAAGTGGAGGAATTTTGCTCATGTCAGCAC-TGCGCCCATAGAGTACACTG 1547 consensus_14001#1 ACCAA---TCAAGTGGAGGAATTTTGCTCATGTCAGCAC-TGCGCCCATAGAGTACACTG 366 consensus_14001#2 ACCAGATGTCATAGGCATGACATTTCTCCCTATCGTCTCACTTGTCGGTGATATGCCTGG 340 **** *** * * ** *** * * ** * * * * * * * * consensus_14001#0 AAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAAC-TGGGCGTG 1606 consensus_14001#1 AAACAAGTATTACAGACCTATCTGGTGTTTATATTGTAACAGGAGCACAAC-TGGGCGTG 425 consensus_14001#2 AAAGAAGCACC-----TCGCTCGTGCAATTGAACTTTATTTGAAATGTAAGACACGCTTC 395 *** *** * * ** * ** * * ** * * ** ** * consensus_14001#0 TGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGA 1666 consensus_14001#1 TGGGATTTTGGTGCGAAGAGTGTACTCCATCTTAAACTCTTATTCTCCAGAGTTCCTGGA 485 consensus_14001#2 TGATTCCCTTGTTTTGTCAGTATGCTC-ATAGTGTGCTTTGCCTACTTTTAACATATAGT 454 ** * ** *** * *** ** * ** * * * * * consensus_14001#0 TGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTCCATAGGACA 1726 consensus_14001#1 TGCACAATTAGGAGATCAGTGTGGGACCATAGTCCATCAAGTTCTTTGGTGCATAGGACA 545 consensus_14001#2 T---TAACCCCCTGAGCTGTTT----TCCTAAAGCACTATCATTTCTGTATCAAAGTCCC 507 * ** ** * ** * * ** ** * * * ** ** ** * consensus_14001#0 GATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACC 1786 consensus_14001#1 GATGAAGCTTCATCATCCTCTAGTGATAATGCTAAACTTGTGAAGATTGTTGACATGACC 605 consensus_14001#2 TTTGTAG-TTGGCCTTCGTGTTTTAGTAATGATCATCTTTT-----TTTCTTCTGTGATC 561 ** ** ** * ** * * * ***** * * *** * ** * *** * consensus_14001#0 GAGACATTGAAGGGCCCACAAGATGCACCTGGCCATTGGCTGGTAACAGGA-GCAAAGTT 1845 consensus_14001#1 GAGACCTTGAAGGGCCCACAAGATGCACCTGGCCCTTGGCTGGTAACAGGA-GCAAAGTT 664 consensus_14001#2 AAGATCAACAGTTTTTCCCTACAATGACAAAGTTTAGTGTGACTAAGTTCATACGGTAGT 621 *** * * * * * ** * * *** * * * consensus_14001#0 GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGC-AAAATACTCGTTATTAAACTATTGAC 1904 consensus_14001#1 GGGGGTCGAGAAGGGCAAGATTGTTGTTCGTGCCAAAATACTCGTTATTAAACTATTGAC 724 consensus_14001#2 GGTGCTTCACAAAGACAGTACTGTTACT-GTG----GATAACTGTTTTC------CTGTG 670 ** * * * ** * ** * **** * *** *** *** * ** consensus_14001#0 CAAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCA 1964 consensus_14001#1 CCAATGTTGAAAGCATTCATTCATTCACTCTGCTATGAAGCATCCTGTTTAAAGATAGCA 784 consensus_14001#2 TCTTTTTT-------TTCTTTCTGTTGGACTGAGAT--ATTTTCCTGGATAAATATATTA 721 * ** *** *** * *** ** * ***** **** *** * consensus_14001#0 TATGTTCTTTTGTTCATCATGTATGGTTTTTAATGTAACATCATATGGATTCGTGCTTCT 2024 consensus_14001#1 TATGTTCTTTTGTTCATCATGTATGGTTTTTAATGTAACATCATATGGATTCGTGCTAAA 844 consensus_14001#2 CATGTTGGCTCTTCAATCATGC-TGTTCTTT--TTTCACTACAGACAAGCCCCANATTGA 778 ***** * * ****** ** * *** * * ** ** * * * consensus_14001#0 TGTTGATTCTGTGAGGGATTAGCGCCTAGATGTTTGTGTCCGATTACAAAATATTTGACC 2084 consensus_14001#1 AAAAAAAAAA-------------------------------------------------- 854 consensus_14001#2 AGAGTTGCAGT------------------------------------------------- 789 consensus_14001#0 TGGTCTCAGTGATCTGTTAAATCATCTCTGTGTGGCAGTAGAAGATGTATATTAGTATAA 2144 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 ATTTTTGAATTGGTATTTTGTTATGCGAAGTTTAACCCAGTGGAGTTGAACTGGGCAATG 2204 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 CTTTTTTTCCCCTTGTGATATCATGATATGCAATCAACATTTTATGGTGGTTAAAAAAAA 2264 consensus_14001#1 ------------------------------------------------------------ consensus_14001#2 ------------------------------------------------------------ consensus_14001#0 AAAAAAAAAAAAGA 2278 consensus_14001#1 -------------- consensus_14001#2 -------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||