These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14010#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2008 fasta sequence [TACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGA-AGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA-----GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTAAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCA---AAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGGCTGTAATGATATATTCTTCCGTTCCTAAAAAAAAAGA] [+] EMBL AK120907 [TACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGA AGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAGTCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTAAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCA AAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGGCTGTAATGATATATTC ] [+] EMBL CB634019 [ CGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGA AGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCC ] [+] EMBL CB620010 [ GCTGCTCTTTCGAAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTTCCCCCATGATGCGGTGGAGGCGATTTCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCTCGTGGGGCTAGGGCGGCGGTCGC GTTTTTATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGT ] [+] EMBL AY224493 [ GTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTAAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAA ] [+] EMBL CF589200 [ TGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGG ACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAgc ] [-] EMBL CB634020 [ AAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCATATAAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTGTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGAGGGACTTCAGGAAACAATTTCGATGACTGTA ] [-] EMBL CB669232 [ TTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGTATGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTAAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCA AAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTGGATGGCTGTAATGATATATTCTTCCGTTCCTAAAAAAAAAGA] [-] EMBL CB626540 [ TAGACCCTTTTTTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGGTAACAACTATTTTACACCGGCATTATCTGTTTTAGAGAAGAACACCTGACTGATATGTCTTTGAGACTCAGATATTTGCCATATAAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCTTTAAAGGGATTTCAGGAAACA ] [-] EMBL CB620011 [ TTTGAGGTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATTTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGATGAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATTTTACCCCGGCATTATCTGTTTTAGAGAAGAACACCTGACTGATATGTTTCTGAGACTCAGATATTTGCCATATAAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCGGGTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGACTGTAATGATAAAGTGTTCCGT ] [-] EMBL CB645922 [ TAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCA GGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGTTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTAAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTTTAGAGAAGAACACCTGACTGATATGTCTTTGAGACTCAGATATTTGCCA AAATCAAAATGTGTATGTTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTTTAAGGGGGTAATGAT ] [+] EMBL CA767485 [ TATGAACTTGTGGCCCATTTACC GATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGGTATTTGCCATATAAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGACTGTAATGATATATTCTTCCGTTCCTAc ] consensusID : consensus_14010#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 845 fasta sequence [TAATGTGTTAGTAGAAGATATTAATTAGAGATCAGTATTTGCAGACTGCTGTATACATATCATTAAAACCAGTTTCATCATGATCACTCAACCTTTTTTTTCCAGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGTGAACCTTCATAAACTATAGGAGTCTGCTTTTCCCATAATATGTTGATAGCATCATACATAAATAACTGATCTTTCTTGTAATATAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTAAGCAACTTTCTTCCACTTTCTTCTGTATAGGATGATCAGTGTTGCAATACTAACTTGTTATTGCCTACTCACTTAGGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGAGTATTTCTGAATCCACAACTGATGGAACTCTTAAATCTTAATCTCCTTTCTCCAATTGAGAGTTGCACTCCCAATTCTAATTTATTTTGTACTGAATGTTTCTGCAGGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTTTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCATATAAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGACTGTAATGATATAAAAAAAAAAAAAAAAAA] [-] EMBL CB624591 [TAATGTGTTAGTAGAAGATATTAATTAGAGATCAGTATTTGCAGACTGCTGTATACATATCATTAAAACCAGTTTCATCATGATCACTCAACCTTTTTTTTCCAGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGTGAACCTTCATAAACTATAGGAGTCTGCTTTTCCCATAATATGTTGATAGCATCATACATAAATAACTGATCTTTCTTGTAATATAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTAAGCAACTTTCTTCCACTTTCTTCTGTATAGGATGATCAGTGTTGCAATACTAACTTGTTATTGCCTACTCACTTAGGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGAGTATTTCTGAATCCACAACTGATGGAACTCTTAAATCTTAATCTCCTTTCTCCAATTGAGAGTTGCACTCCCAATTCTAATTTATTTTGTACTGAATGTTTCTGCAGGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTTTAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCATATAAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGACTGTA ] [+] EMBL AU173920 [ CCTGACTGATATGTNTNTGAGACTCAGATATTTGCCA AAATCAAAATGTGTATACTTTTCAACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGAGTTCACATGATATGCCNCTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGGAAACAATTTCGATGGCTGTAATGATATAAAAAAAAAAAAAAAAAA] consensusID : consensus_14010#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 820 fasta sequence [AGTACTATACAATGAATTTATTTGAAATGTTACCTTAAGGTAATAAATGTAGAGATGATTAAACATGAAATTGGTGGCTCAGCTTTTAATGTATTCTGCAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTGTAAGTTGTTCCTAGTTTGATTGTCTGTGGCATGCTTCGCTACTTTCATTTCCTTCCCTGTTTAATTCTTGTTGTGTCCAACTCTTCTTTTAATTTAAATACCTTCAACATTCCCACTGATTATTTTGGTAGGAAACATGACCTCTTTTTTTTTGTCAGAATTGAAAAGGCAATTCAATTAGGTTATAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAATTTTTGTCAGAATTGAGAAGGCAATTCAATTAGGTTATGTTTAAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGTTTTAATTTTAATAACCATTTAAAATGCTTACACTTCTCTAATTCAAATGTTCATCAAATTATTAAGGACCTTTGAACATTTCTAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGTATGGTGTATTGATAGACCTCCTGACAGAAATGCTTCACTTTGAGCTCATAAGTTTACATTCTGCTTTCAGATTATTTATTAAGCTAATAGCACTCCACTT] [+] EMBL CB624590 [AGTACTATACAATGAATTTATTTGAAATGTTACCTTAAGGTAATAAATGTAGAGATGATTAAACATGAAATTGGTGGCTCAGCTTTTAATGTATTCTGCAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTGTAAGTTGTTCCTAGTTTGATTGTCTGTGGCATGCTTCGCTACTTTCATTTCCTTCCCTGTTTAATTCTTGTTGTGTCCAACTCTTCTTTTAATTTAAATACCTTCAACATTCCCACTGATTATTTTGGTAGGAAACATGACCTCTTTTTTTTTGTCAGAATTGAAAAGGCAATTCAATTAGGTTATAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAATTTTTGTCAGAATTGAGAAGGCAATTCAATTAGGTTATGTTTAAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGTTTTAATTTTAATAACCATTTAAAATGCTTACACTTCTCTAATTCAAATGTTCATCAAATTATTAAGGACCTTTGAACATTTCTAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGTATGGTGTATTGATAGACCTCCTGACAGAAATGCTTCACTTTGAGCTCATAAGTTTACATTCTGCTTTCAGATTATTTATTAAGCTAATAGCACTCCACTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14010#0 TACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAG 60 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCG 120 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 AAGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCG 180 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAG 240 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 ACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGAC 300 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAG 360 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCG 420 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGC 480 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTC 540 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 CGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAA 600 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCA 660 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 ACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCA 720 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 ACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCT 780 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 TTCCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAA 840 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 CTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGA 900 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 TCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGAC 960 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 TTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTT 1020 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTA 1080 consensus_14010#1 ------------------------------------------------------------ consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 CTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTG 1140 consensus_14010#1 --------------------------------------------------TAATGTGTTA 10 consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 GCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGT 1200 consensus_14010#1 GTAGAAGATATT--AATTAGAGATCAGTATTTGCAGACTGCTGTATACATATCATT---- 64 consensus_14010#2 ------------------------------------------------------------ consensus_14010#0 AGGGTGAGGGTACCATTT--TCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAG 1258 consensus_14010#1 --------AAAACCAGTT--TCATCAT---GATCACTCAACCTTTTT--TTTCCAGGAAG 109 consensus_14010#2 --------AGTACTATACAATGAATTTATTTGAAATGTTACCTTAAGGTAATAAATGTAG 52 ** * * * * * *** * ** consensus_14010#0 ACCCTTTTCT-TGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGT 1317 consensus_14010#1 AACCTGGTGG-TCAGCGTGCATTGAT-------CTTTGATCAAGGGAACAGAATCTCGCA 161 consensus_14010#2 AGATGATTAAACATGAAATTGGTGGC--TCAGCTTTTAATGTATTCTGCAGAGACCTGGT 110 * * * * ** * * **** * * consensus_14010#0 GATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAA 1377 consensus_14010#1 GGTGAACCTTCATAAACTAT-------AGGAGTCT---GCTTTTCCCATAATATGTTGAT 211 consensus_14010#2 GATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAA 170 * ** * ** * *** ** * * * **** * **** * * consensus_14010#0 GCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTG-GTCTCATGCTCAGGTTCTGGGAT 1436 consensus_14010#1 AGCAT-CATAC--ATAAATAACTGATCTTTCTTGTA-ATATAGGGTATCAGTTGCGCCGA 267 consensus_14010#2 GCTTTGCCTGTAAGTT--GTTCCTAGTTTGATTGTCTGTGGCATGCTTCGCTACTTTCAT 228 * * * * ** ** * * * * consensus_14010#0 TGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGA-GGATGCATTGA 1495 consensus_14010#1 TGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGA 327 consensus_14010#2 T-TCCTTCCCTGTTTAATTCTTGTTGTGTCCA-ACTCTTCTTTTAATTTAAATACCTTCA 286 * * * * * ** * consensus_14010#0 GAAGGTCAGGC--CTTGGATACACAATAGTACGCCCTGGTC--CACTGCAGGAAGAACCT 1551 consensus_14010#1 TGTAAGCAACTTTCTTCCACTTTCTTCTGTATAGGATGATCAGTGTTGCAATACTAACTT 387 consensus_14010#2 ACATTCCCACTGATTATTTTGGTAGGAAACATGACCTCTTT---TTTTTTGTCAGAATTG 343 * * * * * * ** consensus_14010#0 GGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCA-GGGTATCAGTTG 1610 consensus_14010#1 GTTATTGCCTACTCACTTAGGTATG-CTACGAGTATGTAGCTGAGCAAGGGAATGAGCTA 446 consensus_14010#2 AAAAGGCA--ATTCAATTAGGTTATAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCA 401 ** * * * * * * * consensus_14010#0 CGCCGATGTAGCAG-ATATTTGTGTCAAAGCATTGCATGATTCC--ACTGCTAGGAACAA 1667 consensus_14010#1 TATGAACTTGTGAGTATTTCTGAATCCACAACTGATGGAACTCTTAAATCTTAATCTCCT 506 consensus_14010#2 AGAATTTTTGTCAG---AATTGAG--AAGGCAATTCA--ATTAGGTTATGTTTAAAAAGC 454 * ** ** * * * * * consensus_14010#0 AAGTTTTGATGTATGCTACGAGTATGTAGCTAAGCAAGG--GAATGAGCTAT-ATGAACT 1724 consensus_14010#1 TTCTCCAATTGAGAGTTGCACTCCCAATTCTAATTTATTTTGTACTGAATGT-TTCTGCA 565 consensus_14010#2 ATCTCTTTATTTCTTTTGCAGACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCA 514 * * * * ** * * * * consensus_14010#0 TGTGGCCCATTT--ACCAGATA-AAGCTAACAACTATCTTACACCGGCATTATCT-GTTC 1780 consensus_14010#1 GGTGGCCCATTT--ACCAGATA-AAGCTAACAACTATCTTACACCGGCATTATCT-GTTT 621 consensus_14010#2 GGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGTTTTAATT 574 ** ** *** * * *** ***** * * * * * * * consensus_14010#0 TAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCA---AAATCAAA 1837 consensus_14010#1 TAGAGAAGAACACCTGACTGATATGTCTCTGAGACTCAGATATTTGCCATATAAATCAAA 681 consensus_14010#2 TTAATAACCATTTAAAATGCTTACACTTCTCTAATTCAAATGTTCATCAAATTATTAAGG 634 * * ** * * ** *** * *** ** ** ** * * * consensus_14010#0 ATGTGTATACTTTTC-AACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGA 1896 consensus_14010#1 ATGTGTATACTTTTC-AACTTGTAAAGCATATGTTTTTTTCCCCATAGAAGCCGTGTGGA 740 consensus_14010#2 ACCTTTGAACATTTCTAGGCTGGAGAGGATGCATT---------GAGAAGGTCAGGCCTT 685 * * * ** **** * ** * ** ** ** * * * * consensus_14010#0 GTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGG 1956 consensus_14010#1 GTTCACATGATATGCCACTTTGGCCCTTTTTGTAAAGATGATCAACAGATTGACTTCAGG 800 consensus_14010#2 GGATACACAATAGTACGCCCTGGTCCAC--TGCAGGTATGGTGTATTGATAGACCTCCTG 743 * *** *** * * *** ** ** * *** * * *** *** ** * consensus_14010#0 AAACAATTTCGATGGCTGTAATGATATATTCTTCCGTTCCTAAAAAAAAAGA-------- 2008 consensus_14010#1 AAACAATTTCGATGACTGTAATGATATA-------AAAAAAAAAAAAAAAAA-------- 845 consensus_14010#2 ACAGAAATGCT-TCACTTTGAGCTCATAAGTTTACATTCTGCTTTCAGATTATTTATTAA 802 * * ** * * * ** * * *** * * * consensus_14010#0 ------------------ consensus_14010#1 ------------------ consensus_14010#2 GCTAATAGCACTCCACTT 820 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||