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Oryza sativa
cluster # 14012 cluster # 14012       Sequences # 14       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14012#0 length = 2051 sequences # 12  
 consensus_14012#1 length = 415 sequences # 1  
consensus_14012#2 length = 94 sequences # 1  
consensusID : consensus_14012#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2051
fasta sequence 
                              [CTGCGCCGCCGCCGCCGCCGCCGCCTCAATCGGGCGAAGCCGCCCTCGCCGCCGTCGCGGCGGCGGCGGCGAGGGCGAGCTCCTGCGAGAGATCCTCCGCCGCCTCATGCCTCGCGCGCGCGCTCCCGCTCCCGCTCTCGCCTGCAGTATTTGTTCCATTGCCGCGCACCACTTTCCGGTGGGCGGCGGGCAATGCTAGGGGTTAAGAGACCTTCTCTCCCCGAGATGGAGGCGCCGGGCGGCGCGGCGGGGGACGCGGAGGAGGAAGTTGATGCCCGGATCCGCTGGGTTCCATGGTGGCTGCTATGGAATGGTGGAATTGCTTGGATGGCCACGAAGGGGATCGACGCCAATTGTTTGGCGACCTCTACGATAGAATCGCGTCGAGTCGGGGTGTTCTTTCCTGTTATTACTAGAAGTAGTTGAATTTCGTGATTGAACACACAAGGAAGCTTGATATCGCGTCGGGGGTGTTCTTTCCTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGATAAATGGAAGATAGTCCAGCAAGTTTTGAAGATGATAGAAAATTTGAGCGCGTCGTAGTAACTGTCGTCCACGATCACGTCCAGTGTTGTTCATGGCATGGGGGATGGAGTCAGGATCCTTGAGGCGTCTGCTCCTGTTGCACTGCTTCATGCCTTTCCTGCCTTCTAGGATGCTTAAGATGGTTGCGAAGTCAGGTGCTTGGGAGTTCATGAAGCGGTCATAATCAATTTCGCTCTCTGTAGTACTTTCTCTGGTGTCTTCCCCGTTGCTTCCTTTTGGAAGAAAAGCGTCCTTTAGAATCTCTTGAGAGAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTGGTTTCCGCATCATCAGGTGGCACTTATAGAAATTATTTTATGGAGGAAAAAGCATTGTATGGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGA-GTCACCTTACCTTTTTTGCCTACCTGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCGCCGGTGCTGTCTTCTCAAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGGCAGCCATGGAATGATGGGATTTCTTTGATGGTCATAAAGGAGATCAAAACCAACGGTTGGCAATCTCTGCAGGGATGATGAACCAGGCTTGTAATATCTGTTGCTGATTTCTTTGGAAGACATAACGGCAAGCTTCATGGGGCACGATGGATTTCAGATGGTTGCTTCAGCCATGTCTCAAGATTCAGTTGATGGACCT-CAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAG-CCCAAGA--GTAAGCGCAGGACT-GGTGACAAGG-CAAGAGGGGAGAAG-AAGGCACTCAAAGTTAAGA-TTAACCTTGCCAG-CCC-GG-CCAAAAAAA-TTAAGAAAAGTAGCAAAAAGAAGGGC-AAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCT-AAAGGGCGCTTTCTT-CCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGC-TTCAT-GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA-TTTTGAAAGGC-TGGAAAGGCATGAAGC-AATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAAAAAAAAAAAAAAAA]

[+] EMBL AK120922             [CTGCGCCGCCGCCGCCGCCGCCGCCTCAATCGGGCGAAGCCGCCCTCGCCGCCGTCGCGGCGGCGGCGGCGAGGGCGAGCTCCTGCGAGAGATCCTCCGCCGCCTCATGCCTCGCGCGCGCGCTCCCGCTCCCGCTCTCGCCTGCAGTATTTGTTCCATTGCCGCGCACCACTTTCCGGTGGGCGGCGGGCAATGCTAGGGGTTAAGAGACCTTCTCTCCCCGAGATGGAGGCGCCGGGCGGCGCGGCGGGGGACGCGGAGGAGGAAGTTGATGCCCGGATCCGCTGGGTTCCATGGTGGCTGCTATGGAATGGTGGAATTGCTTGGATGGCCACGAAGGGGATCGACGCCAATTGTTTGGCGACCTCTACGATAGAATCGCGTCGAGTCGGGGTGTTCTTTCCTGTTATTACTAGAAGTAGTTGAATTTCGTGATTGAACACACAAGGAAGCTTGATATCGCGTCGGGGGTGTTCTTTCCTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGATAAATGGAAGATAGTCCAGCAAGTTTTGAAGATGATAGAAAATTTGAGCGCGTCGTAGTAACTGTCGTCCACGATCACGTCCAGTGTTGTTCATGGCATGGGGGATGGAGTCAGGATCCTTGAGGCGTCTGCTCCTGTTGCACTGCTTCATGCCTTTCCTGCCTTCTAGGATGCTTAAGATGGTTGCGAAGTCAGGTGCTTGGGAGTTCATGAAGCGGTCATAATCAATTTCGCTCTCTGTAGTACTTTCTCTGGTGTCTTCCCCGTTGCTTCCTTTTGGAAGAAAAGCGTCCTTTAGAATCTCTTGAGAGAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTGGTTTCCGCATCATCAGGTGGCACTTATAGAAATTATTTTATGGAGGAAAAAGCATTGTATGGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGA GTCACCTTACCTTTTTTGCCTACCTGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCGCCGGTGCTGTCTTCTCAAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGGCAGCCATGGAATGATGGGATTTCTTTGATGGTCATAAAGGAGATCAAAACCAACGGTTGGCAATCTCTGCAGGGATGATGAACCAGGCTTGTAATATCTGTTGCTGATTTCTTTGGAAGACATAACGGCAAGCTTCATGGGGCACGATGGATTTCAGATGGTTGCTTCAGCCATGTCTCAAGATTCAGTTGATGGACCT CAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAG CCCAAGA  GTAAGCGCAGGACT GGTGACAAGG CAAGAGGGGAGAAG AAGGCACTCAAAGTTAAGA TTAACCTTGCCAG CCC GG CCAAAAAAA TTAAGAAAAGTAGCAAAAAGAAGGGC AAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCT AAAGGGCGCTTTCTT CCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGC TTCAT GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA TTTTGAAAGGC TGGAAAGGCATGAAGC AATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATAC                 ]
[+] EMBL AK107860             [                                                               CGGCGGCGAGGGCGAGCTCCTGCGAGAGATCCTCCGCCGCCTCATGCCTCGCGCGCGCGCTCCCGCTCCCGCTCTCGCCTGCAGTATTTGTTCCATTGCCGCGCACCACTTTCCGGTGGGCGGCGGGCAATGCTAGGGGTTAAGAGACCTTCTCTCCCCGAGATGGAGGCGCCGGGCGGCGCGGCGGGGGACGCGGAGGAGGAAGTTGATGCCCGGATCCGCTGGGTTCCATGGTGGCTGCTATGGAATGGTGGAATTGCTTGGATGGCCACGAAGGGGATCGACGCCAATTGTTTGGCGACCTCTACGATAGAATCGCGTCGAGTCGGGGTGTTCTTTCCTGTTATTACTAGAAGTAGTTGAATTTCGTGATTGAACACACAAGGAAGCTTGATATCGCGTCGGGGGTGTTCTTTCCTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGATAAATGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI811742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATAG AATATCCTTATGGATAAAACTAGGACACTTGCAA TGTTCAATGGGATGTCACCTTACCTTTTTTGCCTACCTGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCGCCGGT CTGTCTTCTCCAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGCAAGCCATGGAATGATGGGATTTCTTTGATGGTCATAAAGGAGATC AAACC ACGGTT GCAATCTCTGCAGGGATGATGAACCAGGCTTGTAATATCTGTTGCTGATTTCTTTGGAAGACATAACGGCAGGCTTCATGGGGCACGATGGATTTCAGATGGTTGCTTCAGCCATGTCTCAAGATTCAGTTGATGGACCT CAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAG CCCAAGA  GTAAGCGCAGGACT GGTGACAAGG CAAGAGGGGAGAAG AAGGCACTCAAAGTTAAGA TTAACCTTGCCAG CCC GG CCAAAAAAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU062751             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGATGGTTGCTTCAGCCATGTCTCAAGATTCAGTTGATGGACCT CAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAG CCCAAGA  GTAAGCGCAGGACT GGTGACAAGG CAAGAGGGGAGAAG AAGGCACTCAAAGTTAAGA TTAACCTTGCCAG CCC GG CCAAAAAAA TTAAGAAAAGTAGCAAAAAGAAGGGC AAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTNTCTCAAGAGATTCT AAAGGGCGCTTTCTT CCAAGAGAGAGTAAGGGGGGNGACATCGGGGGAANTTCTACAGAGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU165253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGTTGATGGCCNTCCAAGTTTCTGGGTCCAGTGCCANGANTCTTGGTCAGCCCCAAGA  GTAAGCCCAGACCT GGTGCCAAGG NAAGAGGGAAGAAG AAGGCACTCAAAGTTAAGATTTAACCTTGCCAG CCCGGG CCAAAAAAA TTAAGAAAAGTAGCAAAAAGAAGGGC AAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCT AAAGGGCGCTTTCTT CCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGC TTCAT GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA TTTTGAAAGGC TGGAAAGGCATGAAGC AATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAAAAAAA         ]
[+] EMBL AU063542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGATGGACCT CAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAG CCCAAGA  GTAAGCGCAGGACT GGTGACAAGG CAAGAGGGGAGAAG AAGGCACTCAAAGTTAAGA TTAACCTTGCCAG CCC GG CCAAAAAAA TTAAGAAAAGTAGCAAAAAGAAGGGC AAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCT AAAGGGCGCTTTCTT CCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGCTTTCATGGAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTATTTTTGAAAGGCTTGGGAAGGCATNAAGC AATGTAACAAGNTCAGGCGCCTCAAGGATC                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU063573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tTTGATGGACCT CAAGTTTCTGGGTGCAGTGCCACGAGTNTTGGTCAG CCCAAGA  GTAAGCNCAGGACT GGTGACAAGG CAAGAGGGGAGAAG AAGGCACTCAAAGTTAAGA TTAACCTTGCCAG CCC GG CCAAAAAAN TTAAGAAAAGTAGCAAAAAGAAGGGC AAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAANTGCACTCTCTCAAGANATTCT AAAGGGCGCTTTCTT CCAAGAGAGAGTAAGGGGGGAGACATCGGNGGAANTGCTACAGAGAGTGAAGTTGATTATGNCCGT TTCAT G ACTTTCAGGCACCTNATTTCGAT CCATCTTANGT  TTTTTAAAGGC TNGAAg                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU161997             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCAAAAAGGTAAGCGCAGAACTGGGTGACAAGGCCAAAAGGGGAGAAGAAAGGCACTCAAAGTTAAGA TTAACCTTGCNAGCCCC GGCCCAAAAAAANTTAAGAAAAGTAGCAAAAGAAAGGGCAAAAAAGGGCACTGTTGCTGGCAGGATAGGNAGAAAATGCACTCTCTCAAGAGATTCTAAAAGGGCGCTTTCTTCCCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGC TTCAT GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA TTTTGAAAGGC TGGAAAGGCATGAAGC AATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAAAAAAA         ]
[+] EMBL AU181358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAGTTGATTATGACCGC TTCAT GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA TTTTGAAAGGC TGGAAAGGCATGAAGC AATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAGTTCAAAAAA     ]
[+] EMBL BQ907897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTTGATTATGACCGC TTCAT GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA TTTTGAAAGGC TGGAAAGGCATGAAGCTAATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGC ACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAgttcaaaa       ]
[+] EMBL AU181912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATTATGACCGC TTCAT GAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTA TTTTGAAAGGC TGGAAAGGCATGAAGC AATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAAAAAAAAA       ]
[+] EMBL AU091566             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAAAAAAAAAAAAAAAA]




>consensus_14012#0
CTGCGCCGCCGCCGCCGCCGCCGCCTCAATCGGGCGAAGCCGCCCTCGCCGCCGTCGCGG
CGGCGGCGGCGAGGGCGAGCTCCTGCGAGAGATCCTCCGCCGCCTCATGCCTCGCGCGCG
CGCTCCCGCTCCCGCTCTCGCCTGCAGTATTTGTTCCATTGCCGCGCACCACTTTCCGGT
GGGCGGCGGGCAATGCTAGGGGTTAAGAGACCTTCTCTCCCCGAGATGGAGGCGCCGGGC
GGCGCGGCGGGGGACGCGGAGGAGGAAGTTGATGCCCGGATCCGCTGGGTTCCATGGTGG
CTGCTATGGAATGGTGGAATTGCTTGGATGGCCACGAAGGGGATCGACGCCAATTGTTTG
GCGACCTCTACGATAGAATCGCGTCGAGTCGGGGTGTTCTTTCCTGTTATTACTAGAAGT
AGTTGAATTTCGTGATTGAACACACAAGGAAGCTTGATATCGCGTCGGGGGTGTTCTTTC
CTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGAT
AAATGGAAGATAGTCCAGCAAGTTTTGAAGATGATAGAAAATTTGAGCGCGTCGTAGTAA
CTGTCGTCCACGATCACGTCCAGTGTTGTTCATGGCATGGGGGATGGAGTCAGGATCCTT
GAGGCGTCTGCTCCTGTTGCACTGCTTCATGCCTTTCCTGCCTTCTAGGATGCTTAAGAT
GGTTGCGAAGTCAGGTGCTTGGGAGTTCATGAAGCGGTCATAATCAATTTCGCTCTCTGT
AGTACTTTCTCTGGTGTCTTCCCCGTTGCTTCCTTTTGGAAGAAAAGCGTCCTTTAGAAT
CTCTTGAGAGAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTG
GTTTCCGCATCATCAGGTGGCACTTATAGAAATTATTTTATGGAGGAAAAAGCATTGTAT
GGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGAGT
CACCTTACCTTTTTTGCCTACCTGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCGCC
GGTGCTGTCTTCTCAAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGGCAGC
CATGGAATGATGGGATTTCTTTGATGGTCATAAAGGAGATCAAAACCAACGGTTGGCAAT
CTCTGCAGGGATGATGAACCAGGCTTGTAATATCTGTTGCTGATTTCTTTGGAAGACATA
ACGGCAAGCTTCATGGGGCACGATGGATTTCAGATGGTTGCTTCAGCCATGTCTCAAGAT
TCAGTTGATGGACCTCAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAGCCCAAGAGT
AAGCGCAGGACTGGTGACAAGGCAAGAGGGGAGAAGAAGGCACTCAAAGTTAAGATTAAC
CTTGCCAGCCCGGCCAAAAAAATTAAGAAAAGTAGCAAAAAGAAGGGCAAAAAGGGCACT
GTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCTAAAGGGCGCTTTCTT
CCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTAT
GACCGCTTCATGAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTATTTTGAAAGGC
TGGAAAGGCATGAAGCAATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCT
CTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTG
CTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTCAAATCAA
AACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTTTAAAACT
TGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTGGATATGT
ACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATACTAAAAA
AAAAAAAAAAA

consensusID : consensus_14012#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence 
                              [GAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTGGTTTCCGCATCATCAGGTGGCACTTATAGAATTTATTTTATGGAGGAAAAAGCATTGTATGGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGAGTCACCTTACCTTTTTTGCCTACCTGGTGAGGCTCATCTTAACTTTNAGTGCCTTCTTCCCCTTTCTTGCCTTGGCACCGACTTAATTCATTTGCGGTTCTTTTGCTTAGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCGCCGGTGCTGTCTTCTCCAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGGCAGCCATGGAATGATGGGATTTCTTTGATGGTCATAAAGGGGTC]

[+] EMBL C26283               [GAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTGGTTTCCGCATCATCAGGTGGCACTTATAGAATTTATTTTATGGAGGAAAAAGCATTGTATGGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGAGTCACCTTACCTTTTTTGCCTACCTGGTGAGGCTCATCTTAACTTTNAGTGCCTTCTTCCCCTTTCTTGCCTTGGCACCGACTTAATTCATTTGCGGTTCTTTTGCTTAGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCGCCGGTGCTGTCTTCTCCAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGGCAGCCATGGAATGATGGGATTTCTTTGATGGTCATAAAGGGGTC]




>consensus_14012#1
GAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTGGTTTCCGCA
TCATCAGGTGGCACTTATAGAATTTATTTTATGGAGGAAAAAGCATTGTATGGCATGATA
GAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGAGTCACCTTACC
TTTTTTGCCTACCTGGTGAGGCTCATCTTAACTTTNAGTGCCTTCTTCCCCTTTCTTGCC
TTGGCACCGACTTAATTCATTTGCGGTTCTTTTGCTTAGTCTGCATTTCATGAATGGGAT
TCCTTCTCCTGCGCCGGTGCTGTCTTCTCCAATGGGAAATGGAGGCAAGCATCTGCCCTG
TTCCATGGTGGCAGCCATGGAATGATGGGATTTCTTTGATGGTCATAAAGGGGTC

consensusID : consensus_14012#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 94
fasta sequence 
                              [TCCTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA765528             [TCCTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14012#2
TCCTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTG
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14012#0      CTGCGCCGCCGCCGCCGCCGCCGCCTCAATCGGGCGAAGCCGCCCTCGCCGCCGTCGCGG 60
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CGGCGGCGGCGAGGGCGAGCTCCTGCGAGAGATCCTCCGCCGCCTCATGCCTCGCGCGCG 120
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CGCTCCCGCTCCCGCTCTCGCCTGCAGTATTTGTTCCATTGCCGCGCACCACTTTCCGGT 180
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GGGCGGCGGGCAATGCTAGGGGTTAAGAGACCTTCTCTCCCCGAGATGGAGGCGCCGGGC 240
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GGCGCGGCGGGGGACGCGGAGGAGGAAGTTGATGCCCGGATCCGCTGGGTTCCATGGTGG 300
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CTGCTATGGAATGGTGGAATTGCTTGGATGGCCACGAAGGGGATCGACGCCAATTGTTTG 360
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GCGACCTCTACGATAGAATCGCGTCGAGTCGGGGTGTTCTTTCCTGTTATTACTAGAAGT 420
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      AGTTGAATTTCGTGATTGAACACACAAGGAAGCTTGATATCGCGTCGGGGGTGTTCTTTC 480
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CTGTTATTACTAGATGTAGTTGGGTTTCGTGATTGAACACCTAAGGAAAGGAAGCTTGAT 540
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      AAATGGAAGATAGTCCAGCAAGTTTTGAAGATGATAGAAAATTTGAGCGCGTCGTAGTAA 600
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CTGTCGTCCACGATCACGTCCAGTGTTGTTCATGGCATGGGGGATGGAGTCAGGATCCTT 660
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GAGGCGTCTGCTCCTGTTGCACTGCTTCATGCCTTTCCTGCCTTCTAGGATGCTTAAGAT 720
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GGTTGCGAAGTCAGGTGCTTGGGAGTTCATGAAGCGGTCATAATCAATTTCGCTCTCTGT 780
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      AGTACTTTCTCTGGTGTCTTCCCCGTTGCTTCCTTTTGGAAGAAAAGCGTCCTTTAGAAT 840
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CTCTTGAGAGAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTG 900
consensus_14012#1      ---------GAGTGCACTTTCTCCCTCTCCTGCCATCAGTAGTGCCTTTATTTTCGCTTG 51
consensus_14012#2      ---------------------------TCCTGTTATTACTAGA--------TGTAGTTGG 25
                                                  *****  ** * ***         * * * * *

consensus_14012#0      GTTTCCGCATCATCAGGTGGCACTTATAGAAATTA--TTTTATGGAGGAAAAAGCATTGT 958
consensus_14012#1      GTTTCCGCATCATCAGGTGGCACTTATAGAATTTA--TTTTATGGAGGAAAAAGCATTGT 109
consensus_14012#2      GTTTCGTGATTG------AACACCTAAGGAAAGGAAGCTTGATAAAAAAAAAAAAAAAAA 79
                       *****   **          *** **  ***   *   ** **  *  *****  *    

consensus_14012#0      ATGGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGA 1018
consensus_14012#1      ATGGCATGATAGAAATATCCTTATGGATAAAACTAGGACACTTGCAAGTGTTCAATGGGA 169
consensus_14012#2      AAAAAAAAAAAAAAA--------------------------------------------- 94
                       *    *  * * ***                                             

consensus_14012#0      GTCACCTTACCTTTTTTGCCTACCTGTCTGCATTTCATGAATGGGATTCCTTCTCCTGCG 1078
consensus_14012#1      GTCACCTTACCTTTTTTGCCTACCTGG-TGAGGCTCATCT------TAACTTTNAGTGC- 221
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CCGGTGCTGTCTTCTCAAATGGGAAATGGAGGCAAGCATCTGCCCTGTTCCATGGTGGCA 1138
consensus_14012#1      CTTCTTCCCCTTTCTTGCCTTGGCACCGACTTAATTCATTTGCGGTTCTTTTGCTTAGTC 281
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GCCATGGAATGA-TGGGATTTCTTTGATGGTCATAAAGGAGATCAAAACCAACGGTTGGC 1197
consensus_14012#1      TGCATTTCATGAATGGGATTCCTTCTCCTG-CGCCGGTGCTGTCTTCTCCAATGGGAAAT 340
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      AATCTCT-GCAGGGATGATGAACCAGGCTTGTAAT-ATCTGTTGCTG--ATTTCTTTGGA 1253
consensus_14012#1      GGAGGCAAGCATCTGCCCTGTTCCATGGTGGCAGCCATGGAATGATGGGATTTCTTTGAT 400
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      AGACATAACGGCAAGCTTCATGGGGCACGATGGATTTCAGATGGTTGCTTCAGCCATGTC 1313
consensus_14012#1      GGTCATAAAGGGGTC--------------------------------------------- 415
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      TCAAGATTCAGTTGATGGACCTCAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAGCC 1373
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CAAGAGTAAGCGCAGGACTGGTGACAAGGCAAGAGGGGAGAAGAAGGCACTCAAAGTTAA 1433
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GATTAACCTTGCCAGCCCGGCCAAAAAAATTAAGAAAAGTAGCAAAAAGAAGGGCAAAAA 1493
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCTAAAGGGCG 1553
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CTTTCTTCCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGT 1613
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      TGATTATGACCGCTTCATGAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTATTTT 1673
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GAAAGGCTGGAAAGGCATGAAGCAATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTT 1733
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTA 1793
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      TGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAGTGATTCAAGCTCTC 1853
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      AAATCAAAACATTCAGGCCTATGGCCTTGTTGCTAGAACAGTGGTTTCTTCTTTCACCTT 1913
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      TAAAACTTGATGGACTTTGTTCCATTTATCTTAGAAATTTTGTTGCCCTTGAGTCCGGTG 1973
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      GATATGTACTGGAGTATGCTATACTGGGTGATTTAATGGTGATAATGTTAAATCTTGATA 2033
consensus_14012#1      ------------------------------------------------------------
consensus_14012#2      ------------------------------------------------------------
                                                                                   

consensus_14012#0      CTAAAAAAAAAAAAAAAA 2051
consensus_14012#1      ------------------
consensus_14012#2      ------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)