These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14013#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2117 fasta sequence [TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT-GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC-TATGAGAAGACAGG-AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG-ACTGGAGG-CCAGGCACCGAGCAGTACAAG-TTCATCGAGCACTG-C-TTCTCCTCCG-TCGA-CCGG-CAG-AAACAG-CCGTGGCTCA-TCTTCC-TCG-CCCACCGTGTTCTCGGCTACTCA-TCAGCT-AGC-TTCTACGTCGAGGAGGGCACAA-CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT-CCATGGC-TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC-GTGGCGAAGGCGGCGAGCCA-CTACAGCGGCGC-GTTCAC-GGCGAC-GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC-GCCGGCGT-AC-GGGCGC--GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC-GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT-CCTCGCCTGCGGC-GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA] [+] EMBL AK101976 [TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAGGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGC ] [+] EMBL CA757754 [ TTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTTCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGAT GGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGG ] [+] EMBL AU162276 [ CGTTTGGGGGGAGCAAAGCNNGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATTGGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTNCNAACTACAAGAATCTTGACTTTTNAGAAGACAGGNAAAGGG TTCATGAAGCTTCAGNTAAT ] [+] EMBL CB651497 [ acAGTATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTG ] [+] EMBL AK063756 [ TACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGA ] [+] EMBL C74004 [ ATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGNTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGNACCGAGCAGTACAAG TTCATCGNGC ] [-] EMBL CB651496 [ TTCTAT GGAATTGGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTG ] [+] EMBL AU029610 [ actTCGAANTGGAGGCCCAGGCACCGACCATTACAAGTTTCATCGAACCATG CTTTCTCCTCCG TCGACCCGG CAG AAACAN CCTTGGCTCA TCTTCCNTCG CCCACCGTTTTCTCGGNTACTCA TCAGCT AGCTTTNTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGNCAGGGAGAGCTTCCAGCCGCTNTGGCAGAATTACAAGGTCGACATCGCCATNTACGGCCATGTCCCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTNC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGTAAC GGGCGC GGTGGAGCCACGTCCAGGACCGGGA TACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATNCCT CTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGNCTGAAAAAAAAAAAAAAAA] [+] EMBL AU029309 [ caATCGAGCACTGCC TTATCTTCCGTTCNA CCGGCCAGAAAACAGCCCGTGGCTNATTTTTCC TCGCCCCACCGTGTTCTCGGCTACTCATTCAGCTAAGCTTTCTACGTCGA GAGGNCACAACCCGAGGAGCCCATGGCAAGGGAGAGCCTCAAGCCGCTTTGGCAGAAGTACAAGGTCGA ATCGCCATGTACGG CATGT CCATGGCTTACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATACCT NTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAA ] [+] EMBL BI796808 [ aCCTCCACCCGCT TGGCAGAAGTACAAGGTCGACATCCCCATGTAC GCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC TGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGT GGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCTT AC GGGC C GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCC ATTTGATCTGAGACTGAAAAAAA ] [+] EMBL BI796965 [ cGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGACAGACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCTT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACAGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAA ] [+] EMBL BI810445 [ acgccCCATGT CCAT GC TACGAGAGAACCTGCACAGTCTACGAGAATGTGTGCTGT GCGAA GCGTCGAGCCACCTACAGCGGCGCAGTTCACTGGCGACAGACGCACGT GT GT GGCCGCGGCGGGGCGAGCCT GCGGACTACAGCCGGCGT ACAGGGCACCAGGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGCAGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAA ] [+] EMBL BI796131 [ ACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAA GCGGCGAGCCA CTACA CGGCGC GTTCAC GGCGAC GACGCACGTGGT GT GGC GC GCGGGGCGAGCCT GCGGACTAC GCCGGCTT AC GGGC C GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCC ATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCCATTTGATCTGAGACTGAAAAA ] consensusID : consensus_14013#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence [CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGGNGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAAGGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNGGTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACGCCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA] [-] EMBL AA753321 [CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGGNGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAAGGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNGGTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACGCCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14013#0 TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAG 60 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 CTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCA 120 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 AAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGC 180 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 GCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAG 240 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 GATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCC 300 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 GCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCC 360 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 CAAGCCATCGAAGGATGATTGGATTGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTAC 420 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTT 480 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TATATTTGCAAACTACAAGAATCTTGACTATGAGAAGACAGGAAAGGGATCCATGAAGCT 540 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAA 600 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTA 660 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 CCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATA 720 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCT 780 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGAC 840 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 AGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAA 900 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACA 960 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCAT 1020 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCC 1080 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 TGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAAT 1140 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 ACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGC 1200 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 ACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAG 1260 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 AGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGT 1320 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 ACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGAT 1380 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 AGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCGACTGGAGGCCAGGCAC 1440 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 CGAGCAGTACAAGTTCATCGAGCACTGCTTCTCCTCCGTCGACCGGCAGAAACAGCCGTG 1500 consensus_14013#1 ------------------------------------------------------------ consensus_14013#0 GCTCATCTTCCTCGCCCACCGTGTTCTCGGCTACTCATCAGCTAGCTTCTACGTCGAGGA 1560 consensus_14013#1 -----------------CCCNCGTTTTGGN--AATTNTTANCNG---TTTAAGTT--GGG 36 ** *** * * * * * * * * ** ** ** consensus_14013#0 GGGCACAACCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAA 1620 consensus_14013#1 GGGCA-AACCGGGG--CCCA-GGGCAGGNGN--CCTCCA-CCGTTTNGGCAGAA--AANA 87 ***** ***** ** **** ******* ****** *** * ******* * * consensus_14013#0 GGTCGACATCGCCATGTACGGCCATGTCCATGGCTACGAGAGAACCTGCCCAGTCTACGA 1680 consensus_14013#1 AGTTGA-ATTNCCA-GTACGGCNAN-TCCATGGTAAGGAGAGA-CCTGCC-ANTTTACGA 142 ** ** ** *** ******* * ******* * ****** ****** * * ***** consensus_14013#0 GAATGTGTGCGTGGCGAAGGCGGCGAGCCACTACAGCGGCGCGTTCACGGCGACGACGCA 1740 consensus_14013#1 GAATTT-TGCGTGG-GAAGGCGG-GANCAATAACAGGGGNGGTTTCACGGNGAAGACGCA 199 **** * ******* ******** ** * * **** ** * ******* ** ****** consensus_14013#0 CGTGGTGGT-GGGCGGCGGCGGGGCGAGCCTGGCGGACTACGCCGGCGTACGGGCGCGGT 1799 consensus_14013#1 NGTTGTTGTTGGGCGGCGGCGGGGCGAGC-TGGCGGATAACGCCGGCGTACGGGCGCGGT 258 ** ** ** ******************* ******* ********************* consensus_14013#0 GGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGG 1859 consensus_14013#1 GGAGCCA-GTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGG 317 ******* **************************************************** consensus_14013#0 CGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCT 1919 consensus_14013#1 CGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNT 377 ********************************************************** * consensus_14013#0 CCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGG 1979 consensus_14013#1 CCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGG 437 ************************************************************ consensus_14013#0 CCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTT 2039 consensus_14013#1 CCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTT 497 ************ *********************************************** consensus_14013#0 GTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGAC 2099 consensus_14013#1 GTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGAC 557 ************************************************************ consensus_14013#0 TGAAAAAAAAAAAAAAAA 2117 consensus_14013#1 TGAAAAAAAAAAAAAAAA 575 ****************** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||