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Oryza sativa
cluster # 14013 cluster # 14013       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14013#0 length = 2117 sequences # 13  
consensus_14013#1 length = 575 sequences # 1  

consensusID : consensus_14013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 2117
fasta sequence
                              [TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT-GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC-TATGAGAAGACAGG-AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG-ACTGGAGG-CCAGGCACCGAGCAGTACAAG-TTCATCGAGCACTG-C-TTCTCCTCCG-TCGA-CCGG-CAG-AAACAG-CCGTGGCTCA-TCTTCC-TCG-CCCACCGTGTTCTCGGCTACTCA-TCAGCT-AGC-TTCTACGTCGAGGAGGGCACAA-CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT-CCATGGC-TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC-GTGGCGAAGGCGGCGAGCCA-CTACAGCGGCGC-GTTCAC-GGCGAC-GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC-GCCGGCGT-AC-GGGCGC--GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC-GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT-CCTCGCCTGCGGC-GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA]

[+] EMBL AK101976             [TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAGGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGC                                           ]
[+] EMBL CA757754             [       TTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTTCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGAT   GGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU162276             [                                                                                                         CGTTTGGGGGGAGCAAAGCNNGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATTGGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTNCNAACTACAAGAATCTTGACTTTTNAGAAGACAGGNAAAGGG TTCATGAAGCTTCAGNTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB651497             [                                                                                                                                                                                                                                                                                                                                        acAGTATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK063756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGA                          ]
[+] EMBL C74004               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGNTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGNACCGAGCAGTACAAG TTCATCGNGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB651496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCTAT GGAATTGGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTG                           ]
[+] EMBL AU029610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             actTCGAANTGGAGGCCCAGGCACCGACCATTACAAGTTTCATCGAACCATG CTTTCTCCTCCG TCGACCCGG CAG AAACAN CCTTGGCTCA TCTTCCNTCG CCCACCGTTTTCTCGGNTACTCA TCAGCT AGCTTTNTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGNCAGGGAGAGCTTCCAGCCGCTNTGGCAGAATTACAAGGTCGACATCGCCATNTACGGCCATGTCCCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTNC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGTAAC GGGCGC  GGTGGAGCCACGTCCAGGACCGGGA TACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATNCCT   CTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGNCTGAAAAAAAAAAAAAAAA]
[+] EMBL AU029309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    caATCGAGCACTGCC TTATCTTCCGTTCNA CCGGCCAGAAAACAGCCCGTGGCTNATTTTTCC TCGCCCCACCGTGTTCTCGGCTACTCATTCAGCTAAGCTTTCTACGTCGA GAGGNCACAACCCGAGGAGCCCATGGCAAGGGAGAGCCTCAAGCCGCTTTGGCAGAAGTACAAGGTCGA ATCGCCATGTACGG CATGT CCATGGCTTACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATACCT   NTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAA             ]
[+] EMBL BI796808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aCCTCCACCCGCT TGGCAGAAGTACAAGGTCGACATCCCCATGTAC GCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC  TGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGT GGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCTT AC GGGC C  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCC ATTTGATCTGAGACTGAAAAAAA         ]
[+] EMBL BI796965             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGACAGACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCTT AC GGGCGC  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACAGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAA          ]
[+] EMBL BI810445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        acgccCCATGT CCAT GC TACGAGAGAACCTGCACAGTCTACGAGAATGTGTGCTGT GCGAA GCGTCGAGCCACCTACAGCGGCGCAGTTCACTGGCGACAGACGCACGT GT GT GGCCGCGGCGGGGCGAGCCT GCGGACTACAGCCGGCGT ACAGGGCACCAGGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGCAGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAA        ]
[+] EMBL BI796131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAA GCGGCGAGCCA CTACA CGGCGC GTTCAC GGCGAC GACGCACGTGGT GT GGC GC GCGGGGCGAGCCT GCGGACTAC GCCGGCTT AC GGGC C  GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCC ATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCCATTTGATCTGAGACTGAAAAA           ]


>consensus_14013#0 TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAG CTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCA AAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGC GCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAG GATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCC GCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCC CAAGCCATCGAAGGATGATTGGATTGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTAC TTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTT TATATTTGCAAACTACAAGAATCTTGACTATGAGAAGACAGGAAAGGGATCCATGAAGCT TCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAA TCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTA CCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATA TGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCT TTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGAC AGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAA TTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACA TGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCAT TTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCC TGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAAT ACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGC ACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAG AGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGT ACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGAT AGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCGACTGGAGGCCAGGCAC CGAGCAGTACAAGTTCATCGAGCACTGCTTCTCCTCCGTCGACCGGCAGAAACAGCCGTG GCTCATCTTCCTCGCCCACCGTGTTCTCGGCTACTCATCAGCTAGCTTCTACGTCGAGGA GGGCACAACCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAA GGTCGACATCGCCATGTACGGCCATGTCCATGGCTACGAGAGAACCTGCCCAGTCTACGA GAATGTGTGCGTGGCGAAGGCGGCGAGCCACTACAGCGGCGCGTTCACGGCGACGACGCA CGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTACGCCGGCGTACGGGCGCGGTG GAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGC GCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTC CCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGC CTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTG TACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACT GAAAAAAAAAAAAAAAA



consensusID : consensus_14013#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence
                              [CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGGNGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAAGGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNGGTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACGCCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA]

[-] EMBL AA753321             [CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGGNGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAAGGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNGGTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACGCCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA]


>consensus_14013#1 CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGG NGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAA GGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNG GTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACG CCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCA CGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTG CCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCT GTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAAT CCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14013#0      TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAG 60
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      CTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCA 120
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      AAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGC 180
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      GCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAG 240
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      GATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCC 300
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      GCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCC 360
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      CAAGCCATCGAAGGATGATTGGATTGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTAC 420
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTT 480
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TATATTTGCAAACTACAAGAATCTTGACTATGAGAAGACAGGAAAGGGATCCATGAAGCT 540
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAA 600
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTA 660
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      CCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATA 720
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCT 780
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGAC 840
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      AGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAA 900
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACA 960
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCAT 1020
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCC 1080
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      TGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAAT 1140
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      ACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGC 1200
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      ACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAG 1260
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      AGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGT 1320
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      ACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGAT 1380
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      AGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCGACTGGAGGCCAGGCAC 1440
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      CGAGCAGTACAAGTTCATCGAGCACTGCTTCTCCTCCGTCGACCGGCAGAAACAGCCGTG 1500
consensus_14013#1      ------------------------------------------------------------
                                                                                   

consensus_14013#0      GCTCATCTTCCTCGCCCACCGTGTTCTCGGCTACTCATCAGCTAGCTTCTACGTCGAGGA 1560
consensus_14013#1      -----------------CCCNCGTTTTGGN--AATTNTTANCNG---TTTAAGTT--GGG 36
                                         **  *** * *   * *  * * *     * ** **   ** 

consensus_14013#0      GGGCACAACCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAA 1620
consensus_14013#1      GGGCA-AACCGGGG--CCCA-GGGCAGGNGN--CCTCCA-CCGTTTNGGCAGAA--AANA 87
                       ***** ***** **  **** *******     ****** *** *  *******  *  *

consensus_14013#0      GGTCGACATCGCCATGTACGGCCATGTCCATGGCTACGAGAGAACCTGCCCAGTCTACGA 1680
consensus_14013#1      AGTTGA-ATTNCCA-GTACGGCNAN-TCCATGGTAAGGAGAGA-CCTGCC-ANTTTACGA 142
                        ** ** **  *** ******* *  *******  * ****** ****** * * *****

consensus_14013#0      GAATGTGTGCGTGGCGAAGGCGGCGAGCCACTACAGCGGCGCGTTCACGGCGACGACGCA 1740
consensus_14013#1      GAATTT-TGCGTGG-GAAGGCGG-GANCAATAACAGGGGNGGTTTCACGGNGAAGACGCA 199
                       **** * ******* ******** ** * *  **** ** *  ******* ** ******

consensus_14013#0      CGTGGTGGT-GGGCGGCGGCGGGGCGAGCCTGGCGGACTACGCCGGCGTACGGGCGCGGT 1799
consensus_14013#1      NGTTGTTGTTGGGCGGCGGCGGGGCGAGC-TGGCGGATAACGCCGGCGTACGGGCGCGGT 258
                        ** ** ** ******************* *******  *********************

consensus_14013#0      GGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGG 1859
consensus_14013#1      GGAGCCA-GTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGG 317
                       ******* ****************************************************

consensus_14013#0      CGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCT 1919
consensus_14013#1      CGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNT 377
                       ********************************************************** *

consensus_14013#0      CCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGG 1979
consensus_14013#1      CCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGG 437
                       ************************************************************

consensus_14013#0      CCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTT 2039
consensus_14013#1      CCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTT 497
                       ************ ***********************************************

consensus_14013#0      GTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGAC 2099
consensus_14013#1      GTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGAC 557
                       ************************************************************

consensus_14013#0      TGAAAAAAAAAAAAAAAA 2117
consensus_14013#1      TGAAAAAAAAAAAAAAAA 575
                       ******************




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)