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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14019 cluster # 14019       Sequences # 14       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14019#0 length = 273 sequences # 14  

consensusID : consensus_14019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 273
fasta sequence
                              [TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]

[+] EMBL CK085051             [TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTCAAATTTTGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085091             [TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTCAAATTTTGAAGCATGGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085110             [TGACATCAGTGGCCTAGCATTGGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATGGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085043             [TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCAAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATGGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085050             [TGAAATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTCAAATTTCGAAGCATGGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085065             [TGAAATCAGTGGGCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085045             [TGACATCAGTGGGCTAGCATTGGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085062             [TGAAATCAGTGGGCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085068             [TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGTAATGTTATGTTTGTTCTTTGATTGTTAAATTTGGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085090             [TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATGGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCA ]
[+] EMBL CK085074             [TGAAATCAATGGGCTAGCATTGGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTCAAATTTTGAAGCAT                                                  ]
[+] EMBL CK085088             [TGACATCAGTGGCCTAGCATTGGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCATTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCA                                                   ]
[+] EMBL CK085087             [                                              CCAATATGGATGCATTTAAAAACTTCGCTGAAGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCTGGCAATGTTATGTTTGTTCTTTGATTGTCAAATTTTGAAGCATTGGGTACCGGCAACACTTACGTAAGCTATAAGGTTTGGAAAATCCATCAC]
[+] EMBL CK085067             [                                                                                                                TCCCTTTGTCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTGGTTCTGGCAATGTTATGTTT                                                                              ]


>consensus_14019#0 TGACATCAGTGGCCTAGCATTTGGGCTGTCCTGAACACACATGAGTCCAATATGGATGCA TTTAAAAACTTCGCTGAGGGAACAGCTCTCCAAAATTGATTTGTCCACAAAATCCCTTTG TCTTCCATCTTTCCATAAGTTCCATGCCTGAAACAAGAGAATAACTTCAATATTTGTTCT GGCAATGTTATGTTTGTTCTTTGATTGTTAAATTTTGAAGCATTGGGTACCGGCAACACT TACGTAAGCTATAAGGTTTGGAAAATCCATCAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)