Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1402 cluster # 1402       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1402#0 length = 1104 sequences # 2  

consensusID : consensus_1402#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1104
fasta sequence
                              [CCACCGCCACCGCCACCGCCGCCGCTCTCTTCTCCTCCCGCACCCTTTCCCCCTCCTCCTCCCCCCGGCGACGGCGACGGCGAGGCATCCCCGCCGCCGTCACCGGCTTCCTCTCCCGCCGCCATGCTCCCGCGCTCCAACGCCGCCTCGCCCCCCTGCACGTTGTGGATGATTCCAAGGAGGTAGAGACGGCTGCCGGAGATGGTGCGGAGGAGAGGTCGCAGACGGACAAGCTGGTGGACGGGATGGACTTCGGGGAGCTCTGCAACGACTTCGAGTGCATAAGCAGCCCCTACGTGGAGGCCACCGCGAGGCAGCTCGCCCGCGACATCCTCGACCTCCGCGACGACAACCGCGCCTTCACCTGCTACGCCGTCTCCGTCAAATACAAGGACCCGGTCAGAACATTTGTTGGACGGGAGAAGTACAAGAGGCCATTGTGGATCACCAAGGCACTCGAAAACCCTACAGTGACAGTCCAGGAAATGTCAATGCAATCGACAAGCAACCTGACCATCAAATGGACATTCAGAGGCAAACCTAAGAATCCAATCTTCGCAACCATCGGAGGAGACCTGATCGTCTCTGTTACCTCACAGTTCGTATTGAACCAGATTAGCGGCCAAGTGCTCGAACAGGTCGACTCATGGGACCTCTCTGCCTCGTCTCCTCCTGCCCAGGCCTACTTTTGGTTGTCCAGGAGGGCCTTCTCCACTGTTGAAGCCGGAAAGGACACAATCGAAGCTGCAAAGGGTACAGCATCTCGGCTATCATCAAAGAAAGATGAGAACTTGGAGGTTTATCCAGATCCCTCAGGGGATCCTACTAAGTTCTTCCAAAGGCCGGATGATGGATTGAACCAAGATGTGTACCAGATTGCGCTCTTCCTGGCCGTTCTCTACTTCATTGTACAGTTTTTGAGAACGACTCTGTGATTGTACTAGCTCCCACAGTCCCAACTCAACCTGATACTCTGGCCTGATTCTCCAGGTCAAGCTTTTGTGTATCAGTGTATGCATATATGTGTGTGTATCTATTTCTAACGAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068528             [CCACCGCCACCGCCACCGCCGCCGCTCTCTTCTCCTCCCGCACCCTTTCCCCCTCCTCCTCCCCCCGGCGACGGCGACGGCGAGGCATCCCCGCCGCCGTCACCGGCTTCCTCTCCCGCCGCCATGCTCCCGCGCTCCAACGCCGCCTCGCCCCCCTGCACGTTGTGGATGATTCCAAGGAGGTAGAGACGGCTGCCGGAGATGGTGCGGAGGAGAGGTCGCAGACGGACAAGCTGGTGGACGGGATGGACTTCGGGGAGCTCTGCAACGACTTCGAGTGCATAAGCAGCCCCTACGTGGAGGCCACCGCGAGGCAGCTCGCCCGCGACATCCTCGACCTCCGCGACGACAACCGCGCCTTCACCTGCTACGCCGTCTCCGTCAAATACAAGGACCCGGTCAGAACATTTGTTGGACGGGAGAAGTACAAGAGGCCATTGTGGATCACCAAGGCACTCGAAAACCCTACAGTGACAGTCCAGGAAATGTCAATGCAATCGACAAGCAACCTGACCATCAAATGGACATTCAGAGGCAAACCTAAGAATCCAATCTTCGCAACCATCGGAGGAGACCTGATCGTCTCTGTTACCTCACAGTTCGTATTGAACCAGATTAGCGGCCAAGTGCTCGAACAGGTCGACTCATGGGACCTCTCTGCCTCGTCTCCTCCTGCCCAGGCCTACTTTTGGTTGTCCAGGAGGGCCTTCTCCACTGTTGAAGCCGGAAAGGACACAATCGAAGCTGCAAAGGGTACAGCATCTCGGCTATCATCAAAGAAAGATGAGAACTTGGAGGTTTATCCAGATCCCTCAGGGGATCCTACTAAGTTCTTCCAAAGGCCGGATGATGGATTGAACCAAGATGTGTACCAGATTGCGCTCTTCCTGGCCGTTCTCTACTTCATTGTACAGTTTTTGAGAACGACTCTGTGATTGTACTAGCTCCCACAGTCCCAACTCAACCTGATACTCTGGCCTGATTCTCCAGGTCAAGCTTTTGTGTATCAGTGTATGCATATATGTGTGTGT                                                                         ]
[+] EMBL CA753924             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTCCAGGAGGGCCTTCTCCACTGTTGAAGCCGGAAAGGACACAATCGAAGCTGCAAAGGGTACAGCATCTCGGCTATCATCAAAGAAAGATGAGAACTTGGAGGTTTATCCAGATCCCTCAGGGGATCCTACTAAGTTCTTCCAAAGGCCGGATGATGGATTGAACCAAGATGTGTACCAGATTGCGCTTTTCCTGGCCGTTCTCTACTTCATTGTACAGTTTTTGAGAACGACTCTGTGATTGTACTAGCTCCCACAGTCCCAACTCAACCTGATACTCTGGCCTGATTCTCCAGGTCAAGCTTTTGTGTATCAGTGTATGCATATATGTGTGTGTATCTATTTCTAACGAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_1402#0 CCACCGCCACCGCCACCGCCGCCGCTCTCTTCTCCTCCCGCACCCTTTCCCCCTCCTCCT CCCCCCGGCGACGGCGACGGCGAGGCATCCCCGCCGCCGTCACCGGCTTCCTCTCCCGCC GCCATGCTCCCGCGCTCCAACGCCGCCTCGCCCCCCTGCACGTTGTGGATGATTCCAAGG AGGTAGAGACGGCTGCCGGAGATGGTGCGGAGGAGAGGTCGCAGACGGACAAGCTGGTGG ACGGGATGGACTTCGGGGAGCTCTGCAACGACTTCGAGTGCATAAGCAGCCCCTACGTGG AGGCCACCGCGAGGCAGCTCGCCCGCGACATCCTCGACCTCCGCGACGACAACCGCGCCT TCACCTGCTACGCCGTCTCCGTCAAATACAAGGACCCGGTCAGAACATTTGTTGGACGGG AGAAGTACAAGAGGCCATTGTGGATCACCAAGGCACTCGAAAACCCTACAGTGACAGTCC AGGAAATGTCAATGCAATCGACAAGCAACCTGACCATCAAATGGACATTCAGAGGCAAAC CTAAGAATCCAATCTTCGCAACCATCGGAGGAGACCTGATCGTCTCTGTTACCTCACAGT TCGTATTGAACCAGATTAGCGGCCAAGTGCTCGAACAGGTCGACTCATGGGACCTCTCTG CCTCGTCTCCTCCTGCCCAGGCCTACTTTTGGTTGTCCAGGAGGGCCTTCTCCACTGTTG AAGCCGGAAAGGACACAATCGAAGCTGCAAAGGGTACAGCATCTCGGCTATCATCAAAGA AAGATGAGAACTTGGAGGTTTATCCAGATCCCTCAGGGGATCCTACTAAGTTCTTCCAAA GGCCGGATGATGGATTGAACCAAGATGTGTACCAGATTGCGCTCTTCCTGGCCGTTCTCT ACTTCATTGTACAGTTTTTGAGAACGACTCTGTGATTGTACTAGCTCCCACAGTCCCAAC TCAACCTGATACTCTGGCCTGATTCTCCAGGTCAAGCTTTTGTGTATCAGTGTATGCATA TATGTGTGTGTATCTATTTCTAACGAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)