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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14043#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2021 fasta sequence
[AACCGGATCAACGCGAGCAAGCGCTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAGTCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTGCGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCCGTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAGGCCATGGGCGAAGCGCTCGAGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCGCTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCCAACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAGGACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTGGCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCGGGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTACTGCGTCATCACCATGGCTCTAGGGCGTCTCAAAATGAAGAAATGGAAGAAATGGGAATTAGAGACCAACTCGTTGGAGTATCAGTTCGCAAACGATCCTTCACGATTCCGGTTCACGCATCAGACATCGTTCGTGAAACGGCATCTGGGACTGTCAAGCACACCTGGGCTCAGATGGATTGTGGCGTTCTTCAGGCAGTTCTTCGGGTCTGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCATTAGAGGACGATTTCAAAGTTGTCGTTGGCATCAGCCTCCCATTGTGGTTTGTCGCGATCCTTGTGCTCTTCCTTGATATCCAAGGGTTCGGCACGCTTATCTGGATCTCTTTTGTTCCACTCGTCATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATGGAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAACCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAAGAAAGATGCGGCAGCATTGGGGAACAAAAAAAGGATCTCCCATCCTC]
[+] EMBL AK098993 [AACCGGATCAACGCGAGCAAGCGCTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAGTCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTGCGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCCGTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAGGCCATGGGCGAAGCGCTCGAGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCGCTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCCAACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAGGACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTGGCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCGGGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTACTGCGTCATCACCATGGCTCTAGGGCGTCTCAAAATGAAGAAATGGAAGAAATGGGAATTAGAGACCAACTCGTTGGAGTATCAGTTCGCAAACGATCCTTCACGATTCCGGTTCACGCATCAGACATCGTTCGTGAAACGGCATCTGGGACTGTCAAGCACACCTGGGCTCAGATGGATTGTGGCGTTCTTCAGGCAGTTCTTCGGGTCTGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCATTAGAGGACGATTTCAAAGTTGTCGTTGGCATCAGCCTCCCATTGTGGTTTGTCGCGATCCTTGTGCTCTTCCTTGATATCCAAGGGTTCGGCACGCTTATCTGGATCTCTTTTGTTCCACTCGTCATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATGGAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAACCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAAGAAAGATGCGGC ]
[+] EMBL AK111990 [ CGGATCAACGCGAGCAAGCGCTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAGTCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTGCGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCCGTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAGGCCATGGGCGAAGCGCTCGAGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCGCTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCCAACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAGGACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTGGCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCGGGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTACTGCGTCATCACCATGGCTCTAGGGCGTCTCAAAATGAAGAAATGGAAGAAATGGGAATTAGAGACCAACTCGTTGGAGTATCAGTTCGCAAACGATCCTTCACGATTCCGGTTCACGCATCAGACATCGTTCGTGAAACGGCATCTGGGACTGTCAAGCACACCTGGGCTCAGATGGATTGTGGCGTTCTTCAGGCAGTTCTTCGGGTCTGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCATTAGAGGACGATTTCAAAGTTGTCGTTGGCATCAGCCTCCCATTGTGGTTTGTCGCGATCCTTGTGCTCTTCCTTGATATCCAAGGGTTCGGCACGCTTATCTGGATCTCTTTTGTTCCACTCGTCATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATGGAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAACCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGGTGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAAGA ]
[+] EMBL AF384030 [ GCGTACGTGAGTGCGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCCGTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAGGCCATGGGCGAAGCGCTCGAGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCGCTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCCAACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAGGACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTGGCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCGGGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTACTGCGTCATCACCATGGCTCTAGGGCGTCTCAAAATGAAGAAATGGAAGAAGTGGGAATTAGAGACCAACTCGTTGGAGTATCAGTTCGCAAACGATCCTTCACGATTCCGGTTCACGCATCAGACATCGTTCGTGAAACGGCATCTGGGACTGTCAAGCACACCTGGGCTCAGATGGATTGTGGCGTTCTTCAGGCAGTTCTTCGGGTCTGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCATTAGAGGACGATTTCAAAGTTGTCGTTGGCATCAGCCTCCCATTGTGGTTTGTCGCGATCCTTGTGCTCTTCCTTGATATCCAAGGGTTCGGCACGCTTATCTGGATCTCTTTTGTTCCACTCGTCATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATGGAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAACCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGACGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGA ]
[-] EMBL CB654983 [ TACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTTTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAAGAAAGATGCGGCAGCATTGGGGAACAAAAAAAGGA ]
[-] EMBL CB647239 [ GGGATATTCATTCAGTTCCTATGCAGTTACAGCACCTTCCCTCTGTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCACCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCG ]
[-] EMBL CB636647 [ CGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTTTTTCGGAAGAAAGATGCGGCAGCATTGGGGAACACCCAAATAATCTCCCATCCTC]
consensusID : consensus_14043#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2010 fasta sequence
[CGTTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAGTCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTGCGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCCGTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAGGCCATGGGCGAAGCGCTCGGGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCGCTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCCAACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAGGACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTGGCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCGGGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTACTGCGTCATCACCATGGGTTTAGGGCGCCTCAAAATGAAGAAATGGAAGAAGTGGGAGTCACAGACCAACTCATTGGAGTATCAGTTCGCAATCGATCCTTCACGATTCAGGTTCACGCATCAGACGTCGTTCGTGAAGCGGCATCTGGGATCATTCTCAAGCACCCCTGGGCTCAGATGGATCGTAGCATTCTTCAGGCAGTTCTTTGGGTCCGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCTTTGGAGGACGACTTCAAAGTTGTCGTTGGCATCAGCCTCCCTCTGTGGTTCGTCGGAATCCTTGTACTCTTCCTCGATATCCACGGTCTTGGCACACTTATTTGGATCTCTTTTGTTCCTCTCATCATCGTCTTGTTAGTTGGGACCAAGCTAGAGATGGTGATCATGCAGATGGCCCAAGAGATACAGGACAGGGCCACTGTGATCCAGGGAGCACCTGTGGTTGAACCAAGCAACAAGTACTTCTGGTTCAACCGCCCTGACTGGGTCTTGTTCTTCATACACCTGACACTCTTCCATAACGCATTTCAGATGGCGCATTTCGTATGGACTATGGCAACACCTGGTCTGAAGAAATGCTTCCATGAAAATATTTGGCTGAGCATCGTGGAAGTCATTGTGGGGATCTCTCTTCAGGTGCTATGCAGCTACATCACCTTCCCGCTCTACGCGCTCGTCACACAGATGGGATCGAACATGAAGAAGACAATTTTCGAGGAGCAAACGATGAAGGCGCTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCCGACGCGTTCCTGGCGCAGATGAGCGTTGATTTCGCGACGCCGGCGTCGAGCCGGTCCGCGTCGCCGGTGCCCCTGCTGCAGGATCACAGGGGGAGGTTGGACGACCCGCCGAGCCCAATCACGGTGGCCTCCCCCCCGGCCCCGGAGGAGGACATGTACCCGGTGCCGGCGGCGGCTGCGTTTCGCCAGCTGCTAGACGACCCCCCGGACAGGAGGTGGATGGCATCCTTGTCGGCCGACATCGCCGATTTTGATTTTTCCTTCAGCGCACAACGGTGACGGGGGCGATCGGTTTTTGTATTGATGCTGTCCCAAACATAGGAGTTTAATATATATATAATTGTTACGGTAAAATTTAATTATTGTGGGCGCCCTTATATTAGTTTTATAGCGCGACTGGTTTGTGATTAGACAAGGTGATGCATGCTGTTTAGTTATAAAGGATATCAGCGCAGCTAAAAAAACTTACTCCCTACTTAATAGATGCCCTCG]
[+] EMBL AF388195 [CGTTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAGTCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTGCGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCCGTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAGGCCATGGGCGAAGCGCTCGGGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCGCTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCCAACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAGGACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTGGCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCGGGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTACTGCGTCATCACCATGGGTTTAGGGCGCCTCAAAATGAAGAAATGGAAGAAGTGGGAGTCACAGACCAACTCATTGGAGTATCAGTTCGCAATCGATCCTTCACGATTCAGGTTCACGCATCAGACGTCGTTCGTGAAGCGGCATCTGGGATCATTCTCAAGCACCCCTGGGCTCAGATGGATCGTAGCATTCTTCAGGCAGTTCTTTGGGTCCGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCTTTGGAGGACGACTTCAAAGTTGTCGTTGGCATCAGCCTCCCTCTGTGGTTCGTCGGAATCCTTGTACTCTTCCTCGATATCCACGGTCTTGGCACACTTATTTGGATCTCTTTTGTTCCTCTCATCATCGTCTTGTTAGTTGGGACCAAGCTAGAGATGGTGATCATGCAGATGGCCCAAGAGATACAGGACAGGGCCACTGTGATCCAGGGAGCACCTGTGGTTGAACCAAGCAACAAGTACTTCTGGTTCAACCGCCCTGACTGGGTCTTGTTCTTCATACACCTGACACTCTTCCATAACGCATTTCAGATGGCGCATTTCGTATGGACTATGGCAACACCTGGTCTGAAGAAATGCTTCCATGAAAATATTTGGCTGAGCATCGTGGAAGTCATTGTGGGGATCTCTCTTCAGGTGCTATGCAGCTACATCACCTTCCCGCTCTACGCGCTCGTCACACAGATGGGATCGAACATGAAGAAGACAATCTTCGAGGAGCAAACGATGAAGGCGCTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCGGACGCGTTCCTGGCGCAGATGAGCGTCGACTTCGCGACGCCGGCGTCGAGCCGGTCCGCGTCGCCGGTGCACCTGCTGCAGGATCACAGGGCGAGGTTGGACGACCCGCCGAGCCCAATCACGGTGGCCTCACCACCGGCACCGGAGGAGGACATATACCCGGTGCCGGCGGCGGCTGCGTTTTGCCAGCTGCTAGACGACCCGCCGGACAGGAGGTGGATGGCATCCTTGTCGGCCGACATTCCCGATTTTGATTTTTCCTTCAGCGCACAACGGTGACGGGGGCGATCGGTTTCTGTATTGATGCTGTACCAAACATAGGAGTTTAATATATATATAATTGTTACGGTAAAAaaa ]
[-] EMBL CB627253 [ CAATTTTTGAGGAGCAAACGATGAAGGCGCTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCCGACGCGTTCCTGGCGCAGATGAGCGTTGATTTTGCGACGCCGGCGTCGAGCCGGTCCGCGTCGCCGGTGCCCCTGCTGCAGGATCACAGGGGGAGGTCGGACGACCCGCCGAGCCCAATCACGGTGGCCTCCCCCCCGGCCCCGGAGGAGGACATGTACCCGGTGCCGGCGGCGGCTGCGTTTCCCCAGCTGCTAGACGACCCCCCGGACAGGAGGTGGATGGCATCCTCGTCGGCCGACATCGCCGATTTTGATTTTTCCTTCAGCGCACAACGGTGACGGGGGCGATCGGTTTTTGTATTGATGCTGTCCCAAACATAGGAGTTTAATATATATATAATTGTTCCGGTAAAATTTAATTATTGTGGGCGCCCTTATATTAGTTTTATAGCGCGACTGGTTTGTGATTAGACAAGGTGATGCATGCTGTTTAGTTATAAAGGATATCAGCGCAGCTAAAAAAACTTACTCCCTACTTAATAGATGCCCTCG]
[-] EMBL CB627283 [ CAATTTTCGGGGAGCAAACGATGAAGGCGTTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCCGACGCGTTCCTGGCGCAGATGAGGGTTGATTTCGCGACCCCGGCGTCGAGCCGGTCCGCGTCGCCGGTGCCCCTGCTGCAGGATCCCAGGGGGAGGTTGGACGACCCCCCGAGCCCAATCACGGTGGCCTCCCCCCCGGCCCCGGAGGAGGACATGTACCCGGTGCCGGCGGCGGCTGCGTTTCCCCAGCTGTTAGACGACCCCCCGGACAGGAGGTGGATGGCATCCTTGTCGGCCGACATCGCCGATTTTGATTTTTCCTTCAGCGCCCAACGGTGACGGGGGCGATCGGTTTTTGTATTGATGCTGTCCCAAACATAGGAGTTTAATATATATATAATTGTTCCGGTAAAATTTAATTATTGTGCGCGCCCTTATATTAGTTTTATAGCGCGACTGGTTTGTGATTAGACAAGGTGATGCATGCTGTTTAGTTATAAAGGATATCAGCGCAGCTAAAAAAACTTACTCCCTACTTAATAGATGCCCTCG]
[-] EMBL CB627224 [ GGCGCTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCCGACGCGTTCCTGGCGCAGATGAGCGTTGATTTCGCGACGCCGGGGTCGAGCCGGTCCGCGTCGCCGGTGCCCCTGCTGCAGGATCCCAGGGGGAGGTCGGACGACCCGCCGAGCCCAATCACGGGGGCCTCCCCCCCGGCCCCGGAGGGGGACATGTACCCGGTGCCGGCGGGGGGTGGGTTTCGCCAGCTGCTAGACGACCCCCCGGCCAGGAGGGGGATGGCATCCTTGTCGGCCGACATCGCCGATTTTGATTTTTCCTTCAGCGCCCAACGGTGACGGGGGGGATCGGTTTTTGTATTGATGCTGTCCCAAACATAGGAGTTTAATATATATATAATTGTTACGGTAAAATTTAATTATTGGGGGCGCCCTTATATTAGTTTTATAGCGCGACTGGTTTGTGATTAGACAAGGGGATGCATGCTGTTTAGTTATAAAGGATATCAGCGCAGCTAAAAAAACTTACTCCCTACTTAATAGATGCCCTCG]
consensusID : consensus_14043#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1247 fasta sequence
[GCACGCTTATCTGGATCTCTTTTGTTCCACTCGTCGTAAGTGCGAATTATATATATTTCTTGACTTCTTGTGCAAATGAATAGTCAACAGAATCATGATTTTATCCTACAAGGTATGCAAAACATTTGACAAAAAAAATGCATGCCGTTGTCTTTAGATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATGGAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAACCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGTATGCTACTTGCTAATTGGCATCAACCTTCAAAAGCCAGTGTTATGCACTCACTAATGAGCCACTAATGATTGACATGGTTTGGTTATTTTTGTCTGACAGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGGTGAAACCATTTAGACAAAAATCACTTGTAAATGCTCTTGGAGGTCTCAATTCCAACGTCCTCAACCTTTCCGTGTGTTTGCAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAACGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTGTCGGAAGAAAGATGCGGCAGCATTGGGGAAC]
[+] EMBL CB654028 [GCACGCTTATCTGGATCTCTTTTGTTCCACTCGTCGTAAGTGCGAATTATATATATTTCTTGACTTCTTGTGCAAATGAATAGTCAACAGAATCATGATTTTATCCTACAAGGTATGCAAAACATTTGACAAAAAAAATGCATGCCGTTGTCTTTAGATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATGGAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAACCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGTATGCTACTTGCTAATTGGCATCAACCTTCAAAAGCCAGTGTTATGCACTCACTAATGAGCCACTAATGATTGACATGGTTTGGTTATTTTTGTCTGACAGGCAACCCCTGGCCTGAAGAAATGCTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGGTGAAACCATTTAGACAAAAATCACTTGTAAATGCTCTTGGAGGTCTCAATTCCAACGTCCTCAACCTTTCCGTGTGTTTGCAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAACGCCCTGATGAAC ]
[-] EMBL CB654029 [ TTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTTTACGCACTCGTCACACAGGTGAAACCATTTAGACAAAAATCACTTGTAAATGCTCTTGGAGGTCTCAATTCCAACGTCCTCAACCTTTCCGTGTGTTTGCAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAGATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTGTCGGAAGAAAGATGCGGCAGCATTGGGGAAC]
consensusID : consensus_14043#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 999 fasta sequence
[TTCAATTTCGTGCCACCCCCTGGGTTTTCGACCTGGCTCTCCTGAGCCAGGGTCGCACCCTTATCTGATTCGTGTGTGCCACTCGTCACCTCAGTGTGGTTGGACAACTGGAGATTGTTATCATGGAGAGCCACAGGAGATCCAGAACACGGCACTGGTGATCAAGGGAGCACGTTCGTTAACCAACACAAGTACTTCTGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATGACACTTGATACTGTTCCAG-ACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAA-CCCTGGCCTGAAGAAATGCGTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGA-CGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAAATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAGGAAAGATGCGGCAGCATTGGGGAACATCCAAATAAAAAAAAGAA]
[+] EMBL BI808093 [TTCAATTTCGTGCCACCCCCTGGGTTTTCGACCTGGCTCTCCTGAGCCAGGGTCGCACCCTTATCTGATTCGTGTGTGCCACTCGTCACCTCAGTGTGGTTGGACAACTGGAGATTGTTATCATGGAGAGCCACAGGAGATCCAGAACACGGCACTGGTGATCAAGGGAGCACGTTCGTTAACCAACACAAGTACTTCTGTTTAACCGGCCTGATTGGGTCTTGTTCTTCATGACACTTGATACTGTTCCAG ACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAA CCCTGGCCTGAAGAAATGCGTTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGA CGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCG ]
[-] EMBL CB647240 [ tgGGGTCTTGTTCCTCAT ACACTTGATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAACCCCTGGCCTGAAGAAATGC TTCCATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTATGCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGATGGGATCAAACATGAAGAAGACCATCTTCGAGGAGCAGACGATGAAGGCCCTGATGAACTGGAGGAAGACGGCGAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCACAGATGAGCGGCGACACGACGCCGAGCCGCGGCTCGTCGCCGGTGCACCTGCTGCACAAGCAAAGGGTGAGGTCGGAAGATCCGCCGAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGGTGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGAGGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTGTACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGAGTACAATGTATAGTTGGTACACTACATATAGAAATTAGAAAAGTACAGTCGATTTTTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAGGAAAGATGCGGCAGCATTGGGGAACATCCAAATAAAAAAAAGAA]
consensusID : consensus_14043#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 283 fasta sequence
[CCCAACCCAATGGTAATAGCGCGTAGATCCAAGAAACCAAGGAAGAACGACCAATGCTTGCAGAGGAGCAACGACCGATGGTGAAGGCCCCTGGATTGCAACTCGGAGGGAATGACGGGCCGAAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCAACACGATCGAGCGGCGACACAGACAGCCGAGCCAGCAGGCTCGTCGCCGGTGCAACCTCGCATGCAACAAGCAAAGGGTGAGGTCGGAAGATCCAGCACGAGCGCACCGGCATCGCCG]
[-] EMBL BU667121 [CCCAACCCAATGGTAATAGCGCGTAGATCCAAGAAACCAAGGAAGAACGACCAATGCTTGCAGAGGAGCAACGACCGATGGTGAAGGCCCCTGGATTGCAACTCGGAGGGAATGACGGGCCGAAGGGAGAAGAAGAAGCTCCGGGACGCCGACGAGTTCCTAGCAACACGATCGAGCGGCGACACAGACAGCCGAGCCAGCAGGCTCGTCGCCGGTGCAACCTCGCATGCAACAAGCAAAGGGTGAGGTCGGAAGATCCAGCACGAGCGCACCGGCATCGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 AACCGGATCAACGCGAGCAAGCGCTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAG 60
consensus_14043#1 ---------------------CGTTCACCTCACCACCTCACCCTGCAGCGACAGAAAGAG 39
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTG 120
consensus_14043#1 TCTGTAGTAGCGTACGATCGCGGCTAGCTATCGAGCTCCAGCGAGAGGCGTACGTGAGTG 99
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 CGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCG 180
consensus_14043#1 CGTGCGTACGTGCGGGAGGGAGGAGGAGGGGAGATGGCAGGGGGAGGAGGGGGGAGGGCG 159
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCC 240
consensus_14043#1 TTGCCGGAGACGCCGACGTGGGCGGTGGCCGTGGTCTGCGCCGTCATCGTGCTCGTCTCC 219
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAG 300
consensus_14043#1 GTCGCCATGGAGCACGGCCTCCACAAGCTCGGCCATTGGTTCCATAAGCGGGAGAAGAAG 279
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GCCATGGGCGAAGCGCTCGAGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCG 360
consensus_14043#1 GCCATGGGCGAAGCGCTCGGGAAGATCAAAGCAGAGTTGATGCTGCTGGGCTTCATATCG 339
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 CTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCC 420
consensus_14043#1 CTGCTCCTCACTGTGGCACAAACGCCCATCTCCAAGATATGCATCCCGGAGTCAGCTGCC 399
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 AACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAG 480
consensus_14043#1 AACATCATGCTGCCGTGCAAGGCAGGGCAAGATATCGTCAAGGGCCTGAAGGGAAAAAAG 459
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTG 540
consensus_14043#1 GACCATCGCCGGAGGCTTCTCTGGTACACCGGAGAAGAAGAGAGCCATCGCCGGTCACTG 519
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCG 600
consensus_14043#1 GCCGGCGCCGCCGGCGAGGATTACTGCGCGCAATCGGGCAAGGTGGCGCTGATGTCATCG 579
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTAC 660
consensus_14043#1 GGCGGCATGCACCAGCTGCACATATTCATTTTCGTGCTCGCGGTGTTCCACGTCACCTAC 639
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TGCGTCATCACCATGGCTCTAGGGCGTCTCAAAATGAAGAAATGGAAGAAATGGGAATTA 720
consensus_14043#1 TGCGTCATCACCATGGGTTTAGGGCGCCTCAAAATGAAGAAATGGAAGAAGTGGGAGTCA 699
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GAGACCAACTCGTTGGAGTATCAGTTCGCAAACGATCCTTCACGATTCCGGTTCACGCAT 780
consensus_14043#1 CAGACCAACTCATTGGAGTATCAGTTCGCAATCGATCCTTCACGATTCAGGTTCACGCAT 759
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 CAGACATCGTTCGTGAAACGGCATCTGGGACTGT---CAAGCACACCTGGGCTCAGATGG 837
consensus_14043#1 CAGACGTCGTTCGTGAAGCGGCATCTGGGATCATTCTCAAGCACCCCTGGGCTCAGATGG 819
consensus_14043#2 ------------------------------------------------------------
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 ATTGTGGCGTTCTTCAGGCAGTTCTTCGGGTCTGTCACCAAGGTGGACTACCTGACCATG 897
consensus_14043#1 ATCGTAGCATTCTTCAGGCAGTTCTTTGGGTCCGTCACCAAGGTGGACTACCTGACCATG 879
consensus_14043#2 --------------------------------------GCACGCTTATCTGGATCTCTTT 22
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 CGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATAC 957
consensus_14043#1 CGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATAC 939
consensus_14043#2 TGTTCCACTCGTCGTAAGTGCGAATTATATATATTTCTTGACTTCTTGTGCAAATGAATA 82
consensus_14043#3 ------------------------------------TTCAATTTC--GTGCCACCCCCTG 22
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 ATCAAGAGGTCATTAGAGGACGATTTCAAAGTTGTCGTTGGCATCAGCCTCCCATTGTGG 1017
consensus_14043#1 ATCAAGAGGTCTTTGGAGGACGACTTCAAAGTTGTCGTTGGCATCAGCCTCCCTCTGTGG 999
consensus_14043#2 GTCAACAGAATCATGATTTTATCCTACAAGGTATGCAAAAC--ATTTGACAAAAAAAATG 140
consensus_14043#3 GGTTTTCGA--CCTGGCTCTCCTGAGCCAGGGTCGCAC------CCTTATCTGATTCGTG 74
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TTTGTCGCGATCCTTGTGCTCTTCCTTGATATCCAAGGGTTCGGCACGCTTATCTGGATC 1077
consensus_14043#1 TTCGTCGGAATCCTTGTACTCTTCCTCGATATCCACGGTCTTGGCACACTTATTTGGATC 1059
consensus_14043#2 CATGCCGTTGTCTTTAG-ATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATG 199
consensus_14043#3 TGTGCCAC--TCGTCA----CCTCAGTGTGGTTGG---ACAACTGGAGATTGTTATCATG 125
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TCTTTTGTTCCACTCGTCATCCTCATGTTGGTTGGGACAAAGCTGGAGATGGTTATCATG 1137
consensus_14043#1 TCTTTTGTTCCTCTCATCATCGTCTTGTTAGTTGGGACCAAGCTAGAGATGGTGATCATG 1119
consensus_14043#2 GAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAA 259
consensus_14043#3 GAGA-GCCACAGGAGATCCAGAACACGGCACTGGTGATCAAGGGAGCAC-GTTCGTT-AA 182
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GAGATGGCACAGGAGATACAGGACAGGGCAACTGTGATCAAGGGAGCACCGGTCGTTGAA 1197
consensus_14043#1 CAGATGGCCCAAGAGATACAGGACAGGGCCACTGTGATCCAGGGAGCACCTGTGGTTGAA 1179
consensus_14043#2 CCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCAT-ACACTT 318
consensus_14043#3 CCAAC--ACAAGTACTTCTG-TTTAACCGGCCTGATTGGGTCTTGTTCTTCATGACACTT 239
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 CCAAGCAACAAGTACTTCTGGTTTAACCGGCCTGATTGGGTCTTGTTCTTCAT-ACACTT 1256
consensus_14043#1 CCAAGCAACAAGTACTTCTGGTTCAACCGCCCTGACTGGGTCTTGTTCTTCAT-ACACCT 1238
consensus_14043#2 GATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGTATGCTACTT 378
consensus_14043#3 GATACTGTTCCAGA-CGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAA------- 291
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GATACTGTTCCAGAACGCATTTCAGATGGCACATTTCGTGTGGACTCTGGCAA------- 1309
consensus_14043#1 GACACTCTTCCATAACGCATTTCAGATGGCGCATTTCGTATGGACTATGGCAA------- 1291
consensus_14043#2 GCTAATTGGCATCAACCTTCAAAAGCCAGTGTTATGCACTCACTAATGAGCCACTAATGA 438
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 ------------------------------------------------------------
consensus_14043#1 ------------------------------------------------------------
consensus_14043#2 TTGACATGGTTTGGTTATTTTTGTCTGACAGGCAACCCCTGGCCTGAAGAAATGC-TTCC 497
consensus_14043#3 ------------------------------------CCCTGGCCTGAAGAAATGCGTTCC 315
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 -----------------------------------CCCCTGGCCTGAAGAAATGC-TTCC 1333
consensus_14043#1 -----------------------------------CACCTGGTCTGAAGAAATGC-TTCC 1315
consensus_14043#2 ATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTAT 557
consensus_14043#3 ATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTAT 375
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 ATGAAAACATGGGCTTGAGTATCATGAAAGTTGTAGTGGGGATATTCATTCAGTTCCTAT 1393
consensus_14043#1 ATGAAAATATTTGGCTGAGCATCGTGGAAGTCATTGTGGGGATCTCTCTTCAGGTGCTAT 1375
consensus_14043#2 GCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAGGTGAAACCATTTAGACAAA 617
consensus_14043#3 GCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAG------------------- 416
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GCAGCTACAGCACCTTCCCTCTCTACGCACTCGTCACACAG------------------- 1434
consensus_14043#1 GCAGCTACATCACCTTCCCGCTCTACGCGCTCGTCACACAG------------------- 1416
consensus_14043#2 AATCACTTGTAAATGCTCTTGGAGGTCTCAATTCCAACGTCCTCAACCTTTCCGTGTGTT 677
consensus_14043#3 ------------------------------------------------------------
consensus_14043#4 -----------------------------------CCCAACCCAATGGTAATAGCGCGTA 25
consensus_14043#0 ------------------------------------------------------------
consensus_14043#1 ------------------------------------------------------------
consensus_14043#2 TGCAGATGGGATCAAACATGAAGAA--GACCATCTTCGAGGAGCA------GACGATGAA 729
consensus_14043#3 -----ATGGGATCAAACATGAAGAA--GACCATCTTCGAGGAGCA------GACGATGAA 463
consensus_14043#4 GATCCAAGAAACCAAGGAAGAACGACCAATGCTTGCAGAGGAGCAACGACCGATGGTGAA 85
consensus_14043#0 -----ATGGGATCAAACATGAAGAA--GACCATCTTCGAGGAGCA------GACGATGAA 1481
consensus_14043#1 -----ATGGGATCGAACATGAAGAA--GACAATTTTCGAGGAGCA------AACGATGAA 1463
* * * * * * *** * * * ******** * * ****
consensus_14043#2 CGCCCT--GATG--AACTGGAGGAAGACGGCG------AGGGAGAAGAAGAAGCTCCGGG 779
consensus_14043#3 GGCCCT--GATG--AACTGGAGGAAGACGGCG------AGGGAGAAGAAGAAGCTCCGGG 513
consensus_14043#4 GGCCCCTGGATTGCAACTCGGAGGGAATGACGGGCCGAAGGGAGAAGAAGAAGCTCCGGG 145
consensus_14043#0 GGCCCT--GATG--AACTGGAGGAAGACGGCG------AGGGAGAAGAAGAAGCTCCGGG 1531
consensus_14043#1 GGCGCT--GATG--AACTGGAGGAAGAAGGCG------ATGGAGAAGAAGAAGGTCCGGG 1513
** * *** **** * * * * ** * ************* ******
consensus_14043#2 ACGCCGACGAGTTCCTAGCA---CAGATGAGCG--------GCGACAC-GAC-GCCGAGC 826
consensus_14043#3 ACGCCGACGAGTTCCTAGCA---CAGATGA-CG--------GCGACAC-GAC-GCCGAGC 559
consensus_14043#4 ACGCCGACGAGTTCCTAGCAACACGATCGAGCG--------GCGACACAGACAGCCGAGC 197
consensus_14043#0 ACGCCGACGAGTTCCTAGCA---CAGATGAGCG--------GCGACAC-GAC-GCCGAGC 1578
consensus_14043#1 ACGCCGACGCGTTCCTGGCG---CAGATGAGCGTTGATTTCGCGACGCCGGC-GTCGAGC 1569
********* ****** ** * ** ** ***** * * * * *****
consensus_14043#2 CGC--GGCTCGTCGCCGGTGCACCTGC---TGCA-CAAGCAAAGGGTGAGGTCGGAAGAT 880
consensus_14043#3 CGC--GGCTCGTCGCCGGTGCACCTGC---TGCA-CAAGCAAAGGGTGAGGTCGGAAGAT 613
consensus_14043#4 CAGCAGGCTCGTCGCCGGTGCAACCTCGCATGCAACAAGCAAAGGGTGAGGTCGGAAGAT 257
consensus_14043#0 CGC--GGCTCGTCGCCGGTGCACCTGC---TGCA-CAAGCAAAGGGTGAGGTCGGAAGAT 1632
consensus_14043#1 CGG--TCCGCGTCGCCGGTGCCCCTGC---TGCA-GGATCACAGGGGGAGGTTGGACGAC 1623
* * ************ * * **** * ** **** ***** *** **
consensus_14043#2 CCGCC--GAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGG 938
consensus_14043#3 CCGCC--GAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGG 671
consensus_14043#4 CCAGCACGAGCGCACCGGCATCGCCG---------------------------------- 283
consensus_14043#0 CCGCC--GAGCGCACCGGCATCGCCGGGGTTCGCCGGAGAGGCCAGGGACATGTACCCGG 1690
consensus_14043#1 CCGCC--GAGCCCAATCACGGTGGCCTCCCCCCCGGCCCCGGAGGAGGACATGTACCCGG 1681
** * **** ** * * *
consensus_14043#2 TGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGA 998
consensus_14043#3 TGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGA 731
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TGCCCGTGGCGCCGGTGGTGCGGCCGCATGGGTTTAACCGGATGGACCCGGATAAGAGGA 1750
consensus_14043#1 TGCCGGCGGCGGCTGCGTTTCGCCAGC-TG---CTAGACGACCC--CCCGGACAGGAGGT 1735
consensus_14043#2 GGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTG 1058
consensus_14043#3 GGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTG 791
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GGGCGGCGTCCTCGTCGGCCATCCAAGTTGACATCGCCGATTCTGATTTCTCCTTCAGTG 1810
consensus_14043#1 GGATGGCATCCTTGTCGGCC---------GACATCGCCGATTTTGATTTTTCCTTCAGCG 1786
consensus_14043#2 TACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGA 1118
consensus_14043#3 TACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGA 851
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TACAACGGTGATGGCCGAAAGGTTTCTCTGTACTTAAGTTGTATAGCAGCAAATATAGGA 1870
consensus_14043#1 CACAACGGTGACGGGGGCGATCGGTTTTTGTATTGATGCTGTCC-----CAAACATAGGA 1841
consensus_14043#2 GTACAATGTATA----GTTGGTACACTACA-TATAGAGATTAGAAAAGTACAGTCGATTT 1173
consensus_14043#3 GTACAATGTATA----GTTGGTACACTACA-TATAGAAATTAGAAAAGTACAGTCGATTT 906
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 GTACAATGTATA----GTTGGTACACTACA-TATAGAGATTAGAAAAGTACAGTCGATTT 1925
consensus_14043#1 GTTTAATATATATATAATTGTTACGGTAAAATTTAATTATTGTGGGCGCCCTTATATTAG 1901
consensus_14043#2 TTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTGTCGGAAGAAAGATGCGG 1233
consensus_14043#3 TTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAGGAAAGATGCGG 966
consensus_14043#4 ------------------------------------------------------------
consensus_14043#0 TTTTAAGAAACAATAAAAGCATAACTTTGTATAACATATTCTTTCGGAAGAAAGATGCGG 1985
consensus_14043#1 TTTTATAGCGCGACTGGTTTGTGATTAGACAAGGTG-ATGCATGCTGTTTAGTTATAAAG 1960
consensus_14043#2 CAGCATTGGGGAAC------------------------------------ 1247
consensus_14043#3 CAGCATTGGGGAACATCCAAATAAAAAAAAGAA----------------- 999
consensus_14043#4 --------------------------------------------------
consensus_14043#0 CAGCATTGGGGAACAAAAAAAGGATCTCCCATCCTC-------------- 2021
consensus_14043#1 GATATCAGCGCAGCTAAAAAAACTTACTCCCTACTTAATAGATGCCCTCG 2010
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||