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Oryza sativa
cluster # 14059 cluster # 14059       Sequences # 15       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14059#0 length = 1666 sequences # 14  
consensus_14059#1 length = 677 sequences # 1  

consensusID : consensus_14059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1666
fasta sequence
                              [GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG------GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC-AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT-GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA-CTGGTGAGATTCATGTGACGATCATTGCCACA-GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA-GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCA--AAAAAAAAATTGCATTTTTACTCATACGGAGACGCCACGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA]

[+] EMBL AK105869             [GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG      GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGA                                                                                                                                                                                                                    ]
[+] EMBL AK073455             [     AGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG      GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCACAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAG                                                                                                                                                                                                                                                          ]
[+] EMBL AF383876             [                           TCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAGGCAAGTGCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAG TGTAGATGTGGATGAATTTGCA  AAAAAA                                                                             ]
[+] EMBL AK103448             [                               TCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCACCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG      GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGGTGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCT                                                                                                                                                                                                               ]
[+] EMBL CB651924             [                                               GCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGAGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCTGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGATGGAGTTGCTACCTATCCATTCAGTTATGAAGGACGCAAGCGCTCTCTTCAG      GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAAACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAGAGCTGTTATGAAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB651895             [                                               GCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGAGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCATTTAACTCGTGGACTACGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGATATCTCACCGATGGAGTTGTTACCTATCCATTCAGTTTTAAAGGACGCAAGCGCTCTCTTCAG      GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCACATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGACAAACTCTGGAACTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB651925             [                                               GCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG      GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTACATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU062742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATGATCGATTATNAGATGTTGTTGATGAAAACACGCCTNTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATNNTTGGTGTTGGTGTTTCNTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCNGTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGTGGGAAGGGNCATAACCTTGCAAGAAGT AACAAAGTCTCNCAGATTGTGACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AX751485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAAGA CAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCA  CTAAAA                                                                             ]
[+] EMBL C27863               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGA NAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTNACGATCATTGCCACAGGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAAGGGGTGCAAGAATAATGGAGGCCAAAGAAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB651926             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATAAAGTGAGTTGTAGATGTGGATGAA                                                                                           ]
[+] EMBL BI806342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTAACCAAAGTCTCTCAGATTGTGACAA CTTGCCCGATCCTTCTGC AATATAATTTTC GGGCTGTTGTTGATGACCGGTACACCTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTT GCCGATCCCAA GGGTGCAAGAATAATGGAGGCC AAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTC ATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCC ATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCA CA CCGTC CGAATTTTTATTGTATGTTCAAGACGACACTTGGTA TTGTTC TTGTAGGCGCGACTTGCT GCC AATCTA TGA TTGTAGATGTGGATGAA TTGCActtgaaaa                                                                             ]
[+] EMBL AU091451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCACTAAAAAAAAA                                                                          ]
[+] EMBL AK058568             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCACTTGATTGATCTTGCATTTTTACTCATACGGAGACGCCACGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA]


>consensus_14059#0 GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAA AAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCT CACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGC TTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGG CGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATT TTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACA AATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCA AGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTT CATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGAT ATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGG ACGCAAGCGCTCTCTTCAGGCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACAC ACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCA AGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATAT TATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAA CTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGC TGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGT TGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCA GATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGA CCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCA GAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGC GAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTG GTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTT AGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTT GGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATC ATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGT TCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAG TTGTAGATGTGGATGAATTTGCAAAAAAAAAATTGCATTTTTACTCATACGGAGACGCCA CGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA



consensusID : consensus_14059#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence
                              [GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGAAACTGCAATGCTTGGTGTTGGTGTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCAAAAAAAAAAAA]

[-] EMBL CA759475             [GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGAAACTGCAATGCTTGGTGTTGGTGTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCAAAAAAAAAAAA]


>consensus_14059#1 GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGAAACTGCAA TGCTTGGTGTTGGTGTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAGAGCAGGCAAC ACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCAC TGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTT GGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACACTGGTGA GATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGC CGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAA AGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTT TTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAAT TACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACT TAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTG AGGTCAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14059#0      GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAA 60
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      AAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCT 120
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      CACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGC 180
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      TTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGG 240
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      CGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATT 300
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      TTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACA 360
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      AATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCA 420
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      AGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTT 480
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      CATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGAT 540
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      ATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGG 600
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      ACGCAAGCGCTCTCTTCAGGCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACAC 660
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      ACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCA 720
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      AGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATAT 780
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      TATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAA 840
consensus_14059#1      --------------GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAA 46
                                     * ********************************************

consensus_14059#0      CTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGC 900
consensus_14059#1      CTCTGAAACTGCAATGCTTGGTGTTGGTGTT-CTTCCAGCAAAAATCGGGCCCAAGAAGC 105
                       ***** ************************* ****************************

consensus_14059#0      TGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGT 960
consensus_14059#1      TGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGT 165
                       ************************************************************

consensus_14059#0      TGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCA 1020
consensus_14059#1      TGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCA 225
                       ************************************************************

consensus_14059#0      GATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGA 1080
consensus_14059#1      GATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGA 285
                       ************************************************************

consensus_14059#0      CCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCA 1140
consensus_14059#1      CCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCA 345
                       ************************************************************

consensus_14059#0      GAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGC 1200
consensus_14059#1      GAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGC 405
                       ************************************************************

consensus_14059#0      GAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTG 1260
consensus_14059#1      GAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTG 465
                       ************************************************************

consensus_14059#0      GTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTT 1320
consensus_14059#1      GTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTT 525
                       ************************************************************

consensus_14059#0      AGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTT 1380
consensus_14059#1      AGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTT 585
                       ************************************************************

consensus_14059#0      GGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATC 1440
consensus_14059#1      GGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATC 645
                       ************************************************************

consensus_14059#0      ATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGT 1500
consensus_14059#1      ATCTAGATGAGGTTGAGGTCAAAAAAAAAAAA---------------------------- 677
                       ********************   *  *    *                            

consensus_14059#0      TCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAG 1560
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      TTGTAGATGTGGATGAATTTGCAAAAAAAAAATTGCATTTTTACTCATACGGAGACGCCA 1620
consensus_14059#1      ------------------------------------------------------------
                                                                                   

consensus_14059#0      CGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA 1666
consensus_14059#1      ----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)