These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14059#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1666 fasta sequence [GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG------GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC-AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT-GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA-CTGGTGAGATTCATGTGACGATCATTGCCACA-GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA-GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCA--AAAAAAAAATTGCATTTTTACTCATACGGAGACGCCACGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA] [+] EMBL AK105869 [GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGA ] [+] EMBL AK073455 [ AGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCACAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAG ] [+] EMBL AF383876 [ TCCCTCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAGGCAAGTGCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAG TGTAGATGTGGATGAATTTGCA AAAAAA ] [+] EMBL AK103448 [ TCCTCATCTCCGACGCGCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCACCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGGTGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCT ] [+] EMBL CB651924 [ GCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGAGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCTGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGATGGAGTTGCTACCTATCCATTCAGTTATGAAGGACGCAAGCGCTCTCTTCAG GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAAACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAGAGCTGTTATGAAAAAC ] [+] EMBL CB651895 [ GCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGAGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCATTTAACTCGTGGACTACGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGATATCTCACCGATGGAGTTGTTACCTATCCATTCAGTTTTAAAGGACGCAAGCGCTCTCTTCAG GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCACATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGACAAACTCTGGAACTGCA ] [+] EMBL CB651925 [ GCATTTCCCCCAAAAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCTCACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGCTTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGGCGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATTTTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACAAATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCAAGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTTCATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGATATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGGACGCAAGCGCTCTCTTCAG GCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACACACTTATTGTTATTCCAAATGATCGATTATTACATGTTGTTGATGAAAACACGCCCTTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGA ] [+] EMBL AU062742 [ AATGATCGATTATNAGATGTTGTTGATGAAAACACGCCTNTGCAAGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATNNTTGGTGTTGGTGTTTCNTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCNGTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGTGGGAAGGGNCATAACCTTGCAAGAAGT AACAAAGTCTCNCAGATTGTGACAAG ] [+] EMBL AX751485 [ GATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAAGA CAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCA CTAAAA ] [+] EMBL C27863 [ GATATTATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGA NAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTNACGATCATTGCCACAGGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAAGGGGTGCAAGAATAATGGAGGCCAAAGAAAAGG ] [-] EMBL CB651926 [ GTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGC AGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGT GGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATAAAGTGAGTTGTAGATGTGGATGAA ] [+] EMBL BI806342 [ GTAACCAAAGTCTCTCAGATTGTGACAA CTTGCCCGATCCTTCTGC AATATAATTTTC GGGCTGTTGTTGATGACCGGTACACCTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTT GCCGATCCCAA GGGTGCAAGAATAATGGAGGCC AAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTC ATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCC ATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCA CA CCGTC CGAATTTTTATTGTATGTTCAAGACGACACTTGGTA TTGTTC TTGTAGGCGCGACTTGCT GCC AATCTA TGA TTGTAGATGTGGATGAA TTGCActtgaaaa ] [+] EMBL AU091451 [ CAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACA CTGGTGAGATTCATGTGACGATCATTGCCACA GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCACTAAAAAAAAA ] [+] EMBL AK058568 [ GGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAA GGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGTTCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAGTTGTAGATGTGGATGAATTTGCACTTGATTGATCTTGCATTTTTACTCATACGGAGACGCCACGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA] consensusID : consensus_14059#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 677 fasta sequence [GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGAAACTGCAATGCTTGGTGTTGGTGTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCAAAAAAAAAAAA] [-] EMBL CA759475 [GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAACTCTGAAACTGCAATGCTTGGTGTTGGTGTTCTTCCAGCAAAAATCGGGCCCAAGAAGCTGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGTTGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCAGATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGACCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCAGAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGCGAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTGGTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTTAGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTTGGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATCATCTAGATGAGGTTGAGGTCAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14059#0 GGAGGAGAGCACGGTAGATCCCCCATTTCCCTCCTCATCTCCGACGCGCATTTCCCCCAA 60 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 AAGAGGGGAGCAAATGGCGTCGGCGGCGTGCTCCTCGTCGGCTTCCGCCCTCGTCCGCCT 120 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 CACCGGCCCGATCCATCTGTGCAGCGCCCCGCCCCGTGGGTCCGCGCGGCGGCGCCACGC 180 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 TTCCGTGCGGTGCTCGTTCGCGCCGGTGGAGACGGCGAGGATAAAGGTCGTGGGCGTCGG 240 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 CGGCGGCGGGAACAACGCTGTCAACCGCATGATCGGCAGCGGCCTCCAGGGCATCGAATT 300 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 TTATGCCATAAACACAGATTCCCAGGCGCTTTTGAATTCGCAAGCGCAATACCCGCTACA 360 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 AATTGGAGAGCAGTTAACTCGTGGACTAGGTACTGGTGGAAATCCTAATTTGGGAGAGCA 420 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 AGCTGCTGAGGAATCAAAAGAAGCCATAGCCAATGCCCTGAAGGATTCTGACCTTGTCTT 480 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 CATAACGGCTGGAATGGGAGGGGGTACTGGATCTGGTGCTGCTCCAGTTGTTGCTCAGAT 540 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 ATCAAAGGAAGCCGGTTATCTCACCGTTGGAGTTGTTACCTATCCATTCAGTTTTGAAGG 600 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 ACGCAAGCGCTCTCTTCAGGCGTTGGAAGCATTAGAGAAGCTGGAAAGGAGTGTAGACAC 660 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 ACTTATTGTTATTCCAAATGATCGATTATTAGATGTTGTTGATGAAAACACGCCCTTGCA 720 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 AGATGCGTTTCTTCTTGCAGATGATGTTCTTCGTCAAGGTGTCCAAGGAATATCAGATAT 780 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 TATTACAATACCTGGACTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAA 840 consensus_14059#1 --------------GCCTTGTCAATGTTGATTTTGCTGATGTGAAAGCTGTTATGAAAAA 46 * ******************************************** consensus_14059#0 CTCTGGAACTGCAATGCTTGGTGTTGGTGTTTCTTCCAGCAAAAATCGGGCCCAAGAAGC 900 consensus_14059#1 CTCTGAAACTGCAATGCTTGGTGTTGGTGTT-CTTCCAGCAAAAATCGGGCCCAAGAAGC 105 ***** ************************* **************************** consensus_14059#0 TGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGT 960 consensus_14059#1 TGCAGAGCAGGCAACACTTGCTCCTTTAATCGGGTCGTCTATTGAGGCGGCTACTGGTGT 165 ************************************************************ consensus_14059#0 TGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCA 1020 consensus_14059#1 TGTGTACAATATCACTGGTGGAAAGGACATAACCTTGCAAGAAGTAAACAAAGTCTCTCA 225 ************************************************************ consensus_14059#0 GATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGA 1080 consensus_14059#1 GATTGTGACAAGCTTGGCCGATCCTTCTGCAAATATAATTTTCGGGGCTGTTGTTGATGA 285 ************************************************************ consensus_14059#0 CCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCA 1140 consensus_14059#1 CCGGTACACTGGTGAGATTCATGTGACGATCATTGCCACAGGGTTTCCACAATCCTTTCA 345 ************************************************************ consensus_14059#0 GAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGC 1200 consensus_14059#1 GAAGTCCCTTTTGGCCGATCCCAAGGGTGCAAGAATAATGGAGGCCAAAGAAAAGGCAGC 405 ************************************************************ consensus_14059#0 GAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTG 1260 consensus_14059#1 GAACCTCACCTATAAAGCAGTGGCAGCGGCGACGGTACAACCAGCGCCCGCCGCCACTTG 465 ************************************************************ consensus_14059#0 GTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTT 1320 consensus_14059#1 GTCTCGGAGGCTCTTTTCCTGAACACGGTTCAATAGGAAAACTAGTAGTTTGTGTACCTT 525 ************************************************************ consensus_14059#0 AGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTT 1380 consensus_14059#1 AGATTCTCATGGAATTACTGAGTTGGCGCTCCAATCAGGCTTCTATGTGTTATTCTTTTT 585 ************************************************************ consensus_14059#0 GGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATC 1440 consensus_14059#1 GGATATGTAAACACTTAACAGTTACACATAGTGATTAGCTTCACTTTTATTGTATGTATC 645 ************************************************************ consensus_14059#0 ATCTAGATGAGGTTGAGGTCTTCAGGAGTTCAGCAGCCGTCACGAATTTTTATTGTATGT 1500 consensus_14059#1 ATCTAGATGAGGTTGAGGTCAAAAAAAAAAAA---------------------------- 677 ******************** * * * consensus_14059#0 TCAAGACGACACTTGGTAGTTGTTCGTTGTAGGCGCGACTTGCTGGCCAAATCTATTGAG 1560 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 TTGTAGATGTGGATGAATTTGCAAAAAAAAAATTGCATTTTTACTCATACGGAGACGCCA 1620 consensus_14059#1 ------------------------------------------------------------ consensus_14059#0 CGTGACTACATGATCGCTCTGGTGTCTTGAGAAATCCATTTATTCA 1666 consensus_14059#1 ---------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||