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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14071#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2106 fasta sequence
[TTCTCTCTTGGTCTTATCCTCCTCCTTGTTGTTGCGGGAAGAGGCAGGAAGGAGGAGGTTTTGTGGTGCGATCTTGTTGGGGTTTCAGGTCAGAAGGGAGAAGGGGAGAGGTCAGCCATGGCATTGCCTGTTTCCCTCCTCCGCATCGCGGCGGTTCTGCTCGCCATCTTGCCATTCTGCGCCACGCATCCAAGCCCCGGGTTCCATGCTCCTCGCGAGTTTCACAAGGCACTCGTCCCAGATAGATATGGATTTGTGGCAAGAAGATCAATTGCTGAAGCTCCTGTTGACGTAAATGTCACTACAAACAGTTCCTTTGTCTT-GGCGCAAGAGCGAACATATAGAAAAGACCCCTTGAATGGATTCAGGAAATA-TACTGGCGGTTGGAATATTAGCGAAGTGCACTATATGGCTTCAGTTGGATACACAGCTTTTCCACTGTTCATCATTGCCTTGGT-GT-GGTTTGTGCTGTTTTT-TCTGG-TTATGCTTGGAATTTGCTGCAAGCATTGCTGTTGTCCACA-TCGCAG-TTACACATACTCTCGGGTAGCATATGCCCTATCTCTGATACTTCTAATATTGTTCACTTGTGCTGCAATTGTTGGATGTGTCATGCTGTATGATGGT-CAAGG-AAAGTTCCATAAAAGCACAACGACTACCTTGAATTTTGTCGTTAGCCAGGCCAA-TTTTACTGTCGAAAACCTTAATAACTTATCC-GATAGTTTATC-TGCTGCAAAAAAGGTTGACATAGGGCGATCCTTTTTGCCTAACGAT-GTGCAAAATCAGATCAATGAAATTCAAGGAAAGTTGAACTCATCAGCTACTGAGCTTGCTACTAGAACTACTGACAATTCCGAGAAGATACAAAAATTGCTAAATCAAGTGCGGATTGCTTTGATTATCATTGCGGCAGTAATGCTTCTTCTGGCATTTATTGGCTTCTTACTATCTATCTTTGGCCTGGAATTCATTGTCTCTATTTTGGTGATTATCGGGTGGATACTAGTCACCGGGACGTTTATCCTGTGTGGTGTCTTCCTTCTTCTGCATAATGTCGTCGCAGATACTTGTGTCTCGATGGAGGAGTGGGTTGCTCATCCAACAGAGCACACAGCTCTGGATGACATTATTCCCTGTGTTGAACCTGCCACCGCGAATGAATCCCTGTATAGAAGTAGGCAAGTCACTTACCAACTGGTGAATCTGGTAAACCAAGTAATCACCAACGTGTCCAATGGAAACTTCCCTCCGCAAACTCCTTTCTTCTACTTCAATCAGTCGGGGCCACTGATGCCTACACTCTGCAACCCGTTCACAGCCGATCTGAATAACCGTACTTGCACCAGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCCAGACTACCACTGTCTCAGGAACTGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC-GA-TTCTCGG-TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT-ATCAGTATGGGCCCTTCCTGAT-CCA-GCTGGAGGAC-TGCAC-TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA-CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG-TTTACGTC-GGCCTGGTGATGGTTTCGTCGGCC-GTTATGCTCTCC-CTCGTCTTCTGGGTGATCTAC-GCCA-GGGAG-CGGCGC-CA-CCGTGCGTACAGC-A--A-ACAGCACAACTAC-GCTGACAAGCCGCATCCGACTGGC-CCGGACGCTTGATGCATAT-GGCCGAT-GC-TGTGCTGCAGAAGAATCTCCATGTCCATAC-TCTTCGTGCCTGTCATCATCATGTAGATCA-CCGTGCC-TTCTGATTGTTCGTTGGTTACACC-GATCCTGTCCTCTTCTTT-TTTTTTCTTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGTTTCAGTTTGTGTACCTGCTGCTGTTGATGTACAGTCATCATGGTCCAGAAGAATTGTTGCATTGTCAAAAA]
[+] EMBL CF277021 [TTCTCTCTTGGTCTTATCCTCCTCCTTGTTGTTGCGGGAAGAGGCAGGAAGGAGGAGGTTTTGTGGTGCGATCTTGTTGGGGTTTCAGGTCAGAAGGGAGAAGGGGAGAGGTCAGCCATGGCATTGCCTGTTTCCCTCCTCCGCATCGCGGCGGTTCTGCTCGCCATCTTGCCATTCTGCGCCACGCATCCAAGCCCCGGGTTCCATGCTCCTCGCGAGTTTCACAAGGCACTCGTCCCAGATAGATATGGATTTGTGGCAAGAAGATCAATTGCTGAAGCTCCTGTTGACGTAAATGTCACTACAAACAGTTCCTTTGTCTT GGCGCAAGAGCGAACATATAGAAAAGACCCCTTGAATGGATTCAGGAAATATTACTGGCGGTTGGAATATTAGCGAAGTGCACTATATGGCTTCAGTTGGATACACAGCTTTTCCACTGTTCATCATTGCCTTGGTGGTGGGTTGGTGCTGTTTTT TCTGG TTATGCTTGGAATTTGCTGC AGCATTGCTGTTGTCCACATTCGCAG TTACACATACTCTCGGGTAGCATATGCCCTATCTCTGATAC ]
[+] EMBL AK064917 [ CCTCCTCCTTGTTGTTGCGGGAAGAGGCAGGAAGGAGGAGGTTTTGTGGTGCGATCTTGTTGGGGTTTCAGGTCAGAAGGGAGAAGGGGAGAGGTCAGCCATGGCATTGCCTGTTTCCCTCCTCCGCATCGCGGCGGTTCTGCTCGCCATCTTGCCATTCTGCGCCACGCATCCAAGCCCCGGGTTCCATGCTCCTCGCGAGTTTCACAAGGCACTCGTCCCAGATAGATATGGATTTGTGGCAAGAAGATCAATTGCTGAAGCTCCTGTTGACGTAAATGTCACTACAAACAGTTCCTTTGTCTT GGCGCAAGAGCGAACATATAGAAAAGACCCCTTGAATGGATTCAGGAAATA TACTGGCGGTTGGAATATTAGCGAAGTGCACTATATGGCTTCAGTTGGATACACAGCTTTTCCACTGTTCATCATTGCCTTGGT GT GGTTTGTGCTGTTTTT TCTGG TTATGCTTGGAATTTGCTGCAAGCATTGCTGTTGTCCACA TCGCAG TTACACATACTCTCGGGTAGCATATGCCCTATCTCTGATACTTCTAATATTGTTCACTTGTGCTGCAATTGTTGGATGTGTCATGCTGTATGATGGT CAAGG AAAGTTCCATAAAAGCACAACGACTACCTTGAATTTTGTCGTTAGCCAGGCCAA TTTTACTGTCGAAAACCTTAATAACTTATCC GATAGTTTATC TGCTGCAAAAAAGGTTGACATAGGGCGATCCTTTTTGCCTAACGAT GTGCAAAATCAGATCAATGAAATTCAAGGAAAGTTGAACTCATCAGCTACTGAGCTTGCTACTAGAACTACTGACAATTCCGAGAAGATACAAAAATTGCTAAATCAAGTGCGGATTGCTTTGATTATCATTGCGGCAGTAATGCTTCTTCTGGCATTTATTGGCTTCTTACTATCTATCTTTGGCCTGGAATTCATTGTCTCTATTTTGGTGATTATCGGGTGGATACTAGTCACCGGGACGTTTATCCTGTGTGGTGTCTTCCTTCTTCTGCATAATGTCGTCGCAGATACTTGTGTCTCGATGGAGGAGTGGGTTGCTCATCCAACAGAGCACACAGCTCTGGATGACATTATTCCCTGTGTTGAACCTGCCACCGCGAATGAATCCCTGTATAGAAGTAGGCAAGTCACTTACCAACTGGTGAATCTGGTAAACCAAGTAATCACCAACGTGTCCAATGGAAACTTCCCTCCGCAAACTCCTTTCTTCTACTTCAATCAGTCGGGGCCACTGATGCCTACACTCTGCAACCCGTTCACAGCCGATCTGAATAACCGTACTTGCACCAGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCCAGACTACCACTGTCTCAGGAACTGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGATACCTTCACCAACATCAACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGTTTCGTCGGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATCTAC GCCA GGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGCATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCC TTCTGATTGTTCGTTGGTTACACC GATCCTGTCCTCTTCTTT TTTTTTCTTTTTTTTTTGTTGTAGCATTGTTGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGTTTCAGTTTGTGTACCTGCTGCTGTTGATGTACAGTCATCATGGTCCAGAAGAATTGTTG ]
[+] EMBL OSS11372A [ TCAGGTCAGAAGNGAGAAGGGGAGAGGTCAGCCATGGCATTGCCTGNTTCCCTCCTCCGCATCG GCCGGTTCTGCTCGCCATCTTGNCATTCTGCGCCACGCATCCAAGGCCCGGGTTCCATGNTCCTCGCGAGTTTCACAAGGCACTCGTCCCAGATAGATATGGATTTGTGGCAAGNAGATCAATTGCTGAAGCTCCTGTTGACGTAAATGTCACTACANACAGTTCCTTTGTCTTCGGC ]
[+] EMBL OSR27341A [ GCATCGC GCGGTTCTGCTCGCCATCTTGCCATTCTGCGCCACGCATCCAAGCCCCGGGTTCCATGCTCCTCGCGAGTTTCACAAGGCACTCGTCCCAGATAGATATGGATTTGTGGCAAGAAGATCAATTGCTGAAGCTCCTGTTGACGTAAATGTCACTACAAACAGTTCCTTTGTCTT GGCGCAAGAGCGAACATATAGAAAAGACCCCTTGAATGGATTCAGGAAATA TACTGGCGGTTGGAATATTAGCGAAGTGCACTATATGGCTTCAGTTGGATACACAGCTTTTCCACTGTTCATCATTGCCTTGGT GT GGTTTGTGCTGTTTTTNTCTGGTTTATGCTTGGAATTTGCTGCAAGCATTGCTGTTGTCCACA TCGCAGTTTACACATACTCTCGGGTAGCATATGCCCTATCTCTGATACTTCTAATATTGTTCACTTGTGCTGCAATTGTTGGATGTGTCATGCTGTATGATGGTCCAAGGAAAAGTTCCATAAAAGCACAACGACTACCTTGAATTTTGTCGTTAGCCAGGCCAATTTTTACTGTCGAAAANCTTAATAACTTATCCGGATAGTTTATCTTGCTGCNAAAAAGGGTNACATAGGGCGATCCTTTTTGCCTAACGATNGTGCAAAATCAGATCAATGAAATTCAAGG AAGTTGAACTCATCAGCTACTGAGCTTGC ]
[+] EMBL AK061912 [ TTGTCCACA TCGCAG TTACACATACTCTCGGGTAGCATATGCCCTATCTCTGATACTTCTAATATTGTTCACTCGTGCTGCAATTGTTGGATGTGTCATGCTGTATGATGGT CAAGG AAAGTTCCATAAAAGCACAACGACTACCTCGAATTTTGTCGTTAGCCAGGCCAA TTTTACTGTCGAAAACCTTAATAACTTATCC GATAGTTTATC TGCTGCAAAAAAGGTTGACATAGGGCGATCCTTTTTGCCTAACGAT GTGCAAAATCAGATCAATGAAATTCAAGGAAAGTTGAACTCATCAGCTACTGAGCTTGCTACTAGAACTACTGACAATTCCGAGAAGATACAAAAATTGCTAAATCAAGTGCGGATTGCTTTGATTATCATTGCGGCAGTAGTGCTTCTTCTGGCATTTATTGGCTTCTTACTATCTATCTTTGGCCTGGAATTCATTGTCTCTATTTTGGTGATTATCGGGTGGATACTAGTCACCGGGACGTTTATCCTGTGTGGTGTCTTCCTTCTTCTGCATAATGTCGTCGCAGATACTTGTGTCTCGATGGAGGAGTGGGTTGCTCATCCAACAGAGCACACAGCTCTGGATGACATTATTCCCTGTGTTGAACCTGCCACCGCGAATGAATCCCTGTATAGAAGTAGGCAAGTCACTTACCAACTGGTGAATCTGGTAAACCAAGTAATCACCAACGTGTCCAATGGAAACTTCCCTCCGCAAACTCCTTTCTTCTACTTCAATCAGTCGGGGCCACTGATGCCTACACTCTGCAACCCGTTCACAGCCGATCTGAATAACCGTACTTGCACCAGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCCAGACTACCACTGTCTCAGGAACTGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGTTTCGTCGGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATCTAC GCCA GGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGCATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCC TTCTGATTGTTCGTTGGTTACACC GATCCTGTCCTCTTCTTT TTTTTTCTTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGACAGATTTCTGACTTTGTGCCATTAGAGTTT ]
[+] EMBL CA767440 [ TTTGGTGATTATCGGGTGGATACTAGTCACCGGGACGTTTATCCTGTGTGGTGTCTTCCTTCTTCTGCATAATGTCGTCGCAGATACTTGTGTCTCGATGGAGGAGTGGGTTGCTCATCCAACAGAGCACACAGCCCTGGATGACATTATTCCCTGTGTTGAACCTGCCACCGCGAATGAATCCCTGTATAGAAGTAGGCAAGTCACTTACCAACTGGTGAATCTGGTGAACCAAGTAATCACCAACGTGTCCAATGGAAACTTCCCTCCGCAAACTCCTTTCTTCTACTTCAATCAGTCGGGGCCACTGATGCCTACACTCTGCAACCCGTTCACAGCCGATCTGAATAACCGTACTTGCACCAGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCGAGACTACCACTGTCTCAGGAACCGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGNTTCGTCGGCC GNTATGCTCTNC CTCGTCTTCTGGGTGATCTAC GCCAGGGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATTCGACTGGC CCGGACGCTTGATGCATATGGGCCGAT GC TGGGCTGCAAAANAATCTCCATGTCCATACTTNTTCGGGNCTGGCATNATNATGTANATNA CCGn ]
[+] EMBL CB683468 [ TCCCTCCGCAAACTCCTTTCTTCTACTTCAATCAGTCGGGGCCACTGATGCCTACACTCTGCAACCCGTTCACAGCCGATCTGAATAACCGTACTTGCACCAGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCCAGACTACCACTGTCTCAGGAACTGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGTTTCGTCGGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATCTAC GCCA GGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGCATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCC TTCTGATTGTTCGTTGGTTACACC GATCCTGTCCTCTTCTTT TTTTTTCTTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGA ]
[+] EMBL BF475203 [ AGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCGAGACTACCACTGTCTCAGGAACCGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA CTGCCCTGGC ]
[-] EMBL CB683853 [ TTACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCCAGACTACCACTGTCTCAGGAACTGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGTTTCGTCGGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATCTAC GCCA GGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGCATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCC TTCTGATTGTTCGTTGGTTACACC GATCCTGTCCTCTTCTTT TTTTTTCTTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGTTTCAGTTTGTGTACCTGCTGCAGGTGATGTACAGTCATCATGG ]
[+] EMBL CB096472 [ TACCTTGGACAATGCAACCCGGGTTTGGAAGAATTTTGAGTGCGAGACTACCACTGTCTCAGGAACCGAGATATGCACTACCGTGGGCCGTGTTACCCCAAC GA TTCTCGG TCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTGT ATCAGTATGGGCCCTTCCTGAT CCA GCTGGAGGAC TGCAC TTTCGTCCGCGACACCTTCACCAACATCAACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGTTTCGTCGGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATCTAC GCCA GGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGTATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCC TTCTGATTGTTCGTTGGTTACACC GATCCTGTCCTCTTCTTT TTTTTCTTTTTTTTTTTGGTGNAGCATTGATGTGAATTATTATTGTAGCTTGATC ]
[+] EMBL BI806334 [ ggTACCCCAACGGATTTCTCGGNTCAAATGCCACCGGNCGTGAATTTAACCCAGGGCCTNTAACCATTATGGCCCCTCCCTGATCCCA CCTGGAGGAC TGCAC TTTCGTCC CGACACCTTCACCAACATCAACCAGAACCACCTGCCCT GCCTGGAGAGGTACAGCAAATGGG TTTACATCAGGCCTGGTGATGGTTTCGTCAGCCAGTTATGCTCTCCACTCGTCTTCTGGGTGATCTACAGCCA GGGAG CGGCGC CACCCGTGCGTACAGCAA A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGCATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCACCCGT CC TTCTGATTGTTC TTGGTTACCCCAGATCCTGTCCTCTTCTTTGTTTTTTCTTTTTTTTTTGTTGTA CATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGNGCCATTAGAGTTa ]
[+] EMBL BI807664 [ ccgTGAT CCACTCTGGAGGACATGCACATTTCGTCCGCGACACCTTCACCAACATC ACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGGCTTTAC TC GCCTGGTGATGGTTTCGTCAGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATTTAC GCCA GGGAGACGGCGCACA ACGTGCGTACAGC ACTAGACAGCACAACTACAGCTGACAAGCCGCATCCGACTGGCACCGGACGCTTGATGCATAT GGCCGATAGCATGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCCATTCTGATTGTTCGTTGGTTACACC GA ]
[-] EMBL CF277022 [ AACCAGAACCA CTGCCCTGGCCTGGAGAGGTACAGCAAATGGG TTTACGTC GGCCTGGTGATGGTTTCGTCGGCC GTTATGCTCTCC CTCGTCTTCTGGGTGATCTAC GCCA GGGAG CGGCGC CA CCGTGCGTACAGC A A ACAGCACAACTAC GCTGACAAGCCGCATCCGACTGGC CCGGACGCTTGATGCATAT GGCCGAT GC TGTGCTGCAGAAGAATCTCCATGTCCATAC TCTTCGTGCCTGTCATCATCATGTAGATCA CCGTGCC TTCTGATTGTTCGTTGGTTACACC GATCCTGTCCTCTTCTTT TTTTTTCTTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGTTTCAGTTTGTGTACCTGCTGCTGTTGATGTACAGTCATCATGGTCCAGAAGAATTGTTGCATTGTCAAAAA]
consensusID : consensus_14071#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence
[CCTGGAGAGGTACAGCAAATGGGTTTACTCGGCCTGGTGATGGTTTCTCGCCGTTATGCTCGTCCCTCGTCTTCTGGGTGATCTACGCCAGGGAGCGGCGCCCCCGTGCGTACAGCCAACAGCACAACTACGCTGACAAGCCGCATCCGACTGGCCCGGACGCTTGATGCATATGGCCGATGCTGTGGCTGCAGAAGAATCTCCATGTCCATACTGCTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTGGTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTTGTTTTTTTGTGTTGTAGCCTTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCCAAAAAAAAAA]
[+] EMBL BI811276 [CCTGGAGAGGTACAGCAAATGGGTTTACTCGGCCTGGTGATGGTTTCTCGCCGTTATGCTCGTCCCTCGTCTTCTGGGTGATCTACGCCAGGGAGCGGCGCCCCCGTGCGTACAGCCAACAGCACAACTACGCTGACAAGCCGCATCCGACTGGCCCGGACGCTTGATGCATATGGCCGATGCTGTGGCTGCAGAAGAATCTCCATGTCCATACTGCTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTGGTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTTGTTTTTTTGTGTTGTAGCCTTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCCAAAAAAAAAA]
consensusID : consensus_14071#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 318 fasta sequence
[CGCTTGATGCATATGGCCGATGCTGTGCTGCAGAAGAATCTCCATGTCCATACTCTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTGGTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGTTTCAGTTTGTGTAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU165959 [CGCTTGATGCATATGGCCGATGCTGTGCTGCAGAAGAATCTCCATGTCCATACTCTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTGGTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTTTTTTTTTGTTGTAGCATTGATGTGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAACTTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGTTTCAGTTTGTGTAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14071#0 TTCTCTCTTGGTCTTATCCTCCTCCTTGTTGTTGCGGGAAGAGGCAGGAAGGAGGAGGTT 60
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 TTGTGGTGCGATCTTGTTGGGGTTTCAGGTCAGAAGGGAGAAGGGGAGAGGTCAGCCATG 120
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GCATTGCCTGTTTCCCTCCTCCGCATCGCGGCGGTTCTGCTCGCCATCTTGCCATTCTGC 180
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GCCACGCATCCAAGCCCCGGGTTCCATGCTCCTCGCGAGTTTCACAAGGCACTCGTCCCA 240
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GATAGATATGGATTTGTGGCAAGAAGATCAATTGCTGAAGCTCCTGTTGACGTAAATGTC 300
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 ACTACAAACAGTTCCTTTGTCTTGGCGCAAGAGCGAACATATAGAAAAGACCCCTTGAAT 360
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GGATTCAGGAAATATACTGGCGGTTGGAATATTAGCGAAGTGCACTATATGGCTTCAGTT 420
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GGATACACAGCTTTTCCACTGTTCATCATTGCCTTGGTGTGGTTTGTGCTGTTTTTTCTG 480
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GTTATGCTTGGAATTTGCTGCAAGCATTGCTGTTGTCCACATCGCAGTTACACATACTCT 540
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CGGGTAGCATATGCCCTATCTCTGATACTTCTAATATTGTTCACTTGTGCTGCAATTGTT 600
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GGATGTGTCATGCTGTATGATGGTCAAGGAAAGTTCCATAAAAGCACAACGACTACCTTG 660
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 AATTTTGTCGTTAGCCAGGCCAATTTTACTGTCGAAAACCTTAATAACTTATCCGATAGT 720
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 TTATCTGCTGCAAAAAAGGTTGACATAGGGCGATCCTTTTTGCCTAACGATGTGCAAAAT 780
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CAGATCAATGAAATTCAAGGAAAGTTGAACTCATCAGCTACTGAGCTTGCTACTAGAACT 840
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 ACTGACAATTCCGAGAAGATACAAAAATTGCTAAATCAAGTGCGGATTGCTTTGATTATC 900
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 ATTGCGGCAGTAATGCTTCTTCTGGCATTTATTGGCTTCTTACTATCTATCTTTGGCCTG 960
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GAATTCATTGTCTCTATTTTGGTGATTATCGGGTGGATACTAGTCACCGGGACGTTTATC 1020
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CTGTGTGGTGTCTTCCTTCTTCTGCATAATGTCGTCGCAGATACTTGTGTCTCGATGGAG 1080
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GAGTGGGTTGCTCATCCAACAGAGCACACAGCTCTGGATGACATTATTCCCTGTGTTGAA 1140
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CCTGCCACCGCGAATGAATCCCTGTATAGAAGTAGGCAAGTCACTTACCAACTGGTGAAT 1200
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CTGGTAAACCAAGTAATCACCAACGTGTCCAATGGAAACTTCCCTCCGCAAACTCCTTTC 1260
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 TTCTACTTCAATCAGTCGGGGCCACTGATGCCTACACTCTGCAACCCGTTCACAGCCGAT 1320
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CTGAATAACCGTACTTGCACCAGAGGAGAGGTTACCTTGGACAATGCAACCCGGGTTTGG 1380
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 AAGAATTTTGAGTGCCAGACTACCACTGTCTCAGGAACTGAGATATGCACTACCGTGGGC 1440
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CGTGTTACCCCAACGATTCTCGGTCAGATGGCAGCGGGCGTGAATGTGAGCCAGGGGCTG 1500
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 TATCAGTATGGGCCCTTCCTGATCCAGCTGGAGGACTGCACTTTCGTCCGCGACACCTTC 1560
consensus_14071#1 ------------------------------------------------------------
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 ACCAACATCAACCAGAACCACTGCCCTGGCCTGGAGAGGTACAGCAAATGGGTTTACGTC 1620
consensus_14071#1 -----------------------------CCTGGAGAGGTACAGCAAATGGGTTTAC-TC 30
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GGCCTGGTGATGGTTTCGTCGGCCGTTATGCTC-TCCCTCGTCTTCTGGGTGATCTACGC 1679
consensus_14071#1 GGCCTGGTGATGGTTTCTC--GCCGTTATGCTCGTCCCTCGTCTTCTGGGTGATCTACGC 88
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 CAGGGAGCGGCGCCACCGTGCGTACAGCAAACAGCACAACTACGCTGACAAGCCGCATCC 1739
consensus_14071#1 CAGGGAGCGGCGCCCCCGTGCGTACAGCCAACAGCACAACTACGCTGACAAGCCGCATCC 148
consensus_14071#2 ------------------------------------------------------------
consensus_14071#0 GACTGGCCCGGACGCTTGATGCATATGGCCGATGCTGTG-CTGCAGAAGAATCTCCATGT 1798
consensus_14071#1 GACTGGCCCGGACGCTTGATGCATATGGCCGATGCTGTGGCTGCAGAAGAATCTCCATGT 208
consensus_14071#2 ------------CGCTTGATGCATATGGCCGATGCTGTG-CTGCAGAAGAATCTCCATGT 47
*************************** ********************
consensus_14071#0 CCATACT-CTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTG 1857
consensus_14071#1 CCATACTGCTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTG 268
consensus_14071#2 CCATACT-CTTCGTGCCTGTCATCATCATGTAGATCACCGTGCCTTCTGATTGTTCGTTG 106
******* ****************************************************
consensus_14071#0 GTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTTTTTTTTTTGT--TGTAGCATTGATG 1915
consensus_14071#1 GTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTTGTTTTTTTGTGTTGTAGCCTTGATG 328
consensus_14071#2 GTTACACCGATCCTGTCCTCTTCTTTTTTTTTCTT-TTTTTTTGT--TGTAGCATTGATG 163
*********************************** ********* ****** ******
consensus_14071#0 TGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAAC 1975
consensus_14071#1 TGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAAC 388
consensus_14071#2 TGAATTATTATTGTAGCTTGATCTTTTTCATCTTGTTTGCTCTTCTTGGTGAACTGAAAC 223
************************************************************
consensus_14071#0 TTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGT 2035
consensus_14071#1 TTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCCAAAAAAA 448
consensus_14071#2 TTTGTTAAGAGGTGCTGTTTGTGAACTTGAGATAGATTTCTGACTTTGTGCCATTAGAGT 283
**************************************************** * *
consensus_14071#0 TTCAGTTTGTGTACCTGCTGCTGTTGATGTACAGTCATCATGGTCCAGAAGAATTGTTGC 2095
consensus_14071#1 AAA--------------------------------------------------------- 451
consensus_14071#2 TTCAGTTTGTGTAAAAAAAAAAAAAAAAAAAAAAA------------------------- 318
consensus_14071#0 ATTGTCAAAAA 2106
consensus_14071#1 -----------
consensus_14071#2 -----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||