These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14077#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1715 fasta sequence [TCAAGAAGAAAAATAATTAATTACTCGCAGCAAAGGACGGACAGTTTCCTGCGCAAATTCCACGTTCCACCTTCCTCTTCGGTCGTCTCCGCCGGCTTGGAGTTGGGAGAAGAAGCTCAAACGCGGAGGCCACCACGACCACCACAACACCACCACCTCTTCTCCTAGTCAAACCCACCCTTCCCTTGTAATCTTCGCAACAACAGCAGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTTTATACACCCGCATCTCCAAATCTGAGGAGAGAGGGGAGAAGATAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTCCGGTGGATCCGGCGATGGCGGCGCGGCGGCGCCCAGGAGGAACACCAGGAAGCCCAAGTATTCCAAGTTTACTCAGCAGGAGCTCCCAGCTTGCAAGCCGATTCTTACTCCAAAATGGGTCATTTCAGTTTTCGTTCTTGTCGGAGTCATTTTTGTCCCAATCGGGCTTGTTTCGTTGAAGGCTTCACGAAAGGTTGTTGAGATTGTTGATCGATACGATGATGCATGTGTCCCAGCTAATACAACTGACAAGCTTGCTTACATCCAGAACCCAACAATAAGCAAAAACTGCAGAAGGACTCTTAAGGTTCCAAAGGATATGGATGCACCAATCTTTGTGTATTACCAGCTGGATAACTTTTATCAGAATCATAGGAGATATGTCAAGAGCCGGAGTGATGCACAGCTAAGAGATCCCAAAAAGGCAAATGACACCTCCACTTGTGATCCCGAGGGTACAGCAAATGGAATGGCAATTGTTCCTTGTGGTCTGATTGCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAGTAAGAACCTGCCAGTGGACAAGAAAAACATCTCTTGGAAGAGTGACAGGGAGCACAAATTTGGA-CGTGAT-GTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGAT-CCAAATAAATCGTTGAGTAAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAA-CACATATAGCTTTAGTGGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTAATAAGCTCTTCAAACTTTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAATA-TATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTATAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK069063 [TCAAGAAGAAAAATAATTAATTACTCGCAGCAAAGGACGGACAGTTTCCTGCGCAAATTCCACGTTCCACCTTCCTCTTCGGTCGTCTCCGCCGGCTTGGAGTTGGGAGAAGAAGCTCAAACGCGGAGGCCACCACGACCACCACAACACCACCACCTCTTCTCCTAGTCAAACCCACCCTTCCCTTGTAATCTTCGCAACAACAGCAGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTTTATACACCCGCATCTCCAAATCTGAGGAGTGAGGGGAGAAGATAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTCCGGTGGATCCGGCGATGGCGGCGCGGCGGCGCCCAGGAGGAACACCAGGAAGCCCAAGTATTCCAAGTTTACTCAGCAGGAGCTCCCAGCTTGCAAGCCGATTCTTACTCCAAAATGGGTCATTTCAGTTTTCGTTCTTGTCGGAGTCATTTTTGTCCCAATCGGGCTTGTTTCGTTGAAGGCTTCACGAAAGGTTGTTGAGATAGTTGATCGATACGATGATGCATGTGTCCCAGCTAATACAACTGACAAGCTTGCTTACATCCAGAACCCAACAATAAGCAAAAACTGCAGAAGGACTCTTAAGGTTCCAAAGGATATGGATGCACCAATCTTTGTGTATTACCAGCTGGATAACTTTTATCAGAATCATAGGAGATATGTCAAGAGCCGGAGTGATGCACAGCTAAGAGATCCCAAAAAGGCAAATGACACCTCCACTTGTGATCCCGAGGGTACAGCAAATGGAATGGCAATTGTTCCTTGTGGTCTGATTGCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAGTAAGAACCTGCCAGTGGACAAGAAAAACATCTCTTGGAAGAGTGACAGGGAGCACAAATTTGGA CGTGAT GTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGAT CCAAATAAATCGTTGAGTAAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAA CACATATAGCTTTAGTGGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGAAACAGAAACCCTGCAGGCCGTTAATAAGCTCTTCAAACTTTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAATA TATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTT ] [+] EMBL C26666 [ TCAAACGCGGAGGCCACCACGACCACCACAACACCACCACCTCTTCTCCTAGTCAAACCCACCCTTCCCTTGTAATCTTCGCAACAACAGCAGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTTTATACACCCGNATCTCCAAATCTGAGGAGAGAGGGGAGAAGATAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAACGGNCAGGAAGCCGGATCGAGCTCCGGTGGA ] [+] EMBL AU065794 [ GCGGAGGCCACCACGACCACCACAACACCACCACCTCTTCTCCTAGTCAAACCCACCCTTCCCTTGTAATCTTCGCAACAACAGCAGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTTTATACACCCGCATCTCCAAATCTGAGGAGAGAGGGGAGAAGATAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTCCGGTGGATCCGGCGATGGCGGCGCGGCGNCG CCAGGAGG ACACCANGGAGCCCAAGTATTCCAAG TTACTCAGCAGGAG TTCCAGNTTG AAGCCGATTCTTATTCC AAATNGGTCATTca ] [+] EMBL CF313475 [ CACCTCTTCTCCTAGTCAAACCCACCCTTCCCTTGTAATCTTCGCAACAACAGCAGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTTTATACACCCGCATCTCCAAATCTGAGGAGAGAGGGGAGAAGATAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTCCGGTGGATCCGGCGATGGCGGCGCGGCGGCGCCCAGGAGGAACACCAGGAAGCCCAAGTATTCCAAGTTTACTCAGCAGGAGCTCCCAGCTTGCAAGCCGATTCTTACTCCAAAATGGGTCATTTCAGTTTTCGTTCTTGTCGGAGTCATTTTTGTCCCAATCGGGCTTGTTTCGTTGAAGGCTTCACGAAAGGTTGTTGAGATTGTTGATCGATACGATGATGCATGTGTCCCAGCTAATACAACTGACAAGCTTGCTTACATCCAGAACCCAACAATAAGCAAAAACTGCAGAAGGACTCTTAAGGTTCCAAAGGATATGGATGCACCAATCTTTGTGTATTACCAGCTGGATAACTTTTATCAGAATCATAGGAG ] [+] EMBL CB652309 [ AACAGCCGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTTTATACACCCGCATCTCCAAATCTGAGGAGAGAGGGGAGAAGATAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTCCGGTGGATCCGGCGATGGCGGCGCGGCGGCGCCCAGGAGGAACACCAGGAAGCCCAAGTATTCCAAGTTTACTCAGCAGGAGCTCCCAGCTTGCAAGCCGATTCTTACTCCAAAATGGGTCATTTCAGTTTTCGTTCTTGTCGGAGTCATTTTTGTCCCAATCGGGCTTGTTTCGTTGAAGGCTTCACGAAAGGTTGTTGAGATTGTTGATCGATACGATGATGCATGTGTCCCAGCTAATACAACTGACAAGCTTGCTTACATCCAGAACCCAACAATAAGCAAAAACTGCAGAAGGACTCTTAAGGTTCCAAAAGATATGGATGCACCAATCTTTGTGTATTACCAGCTGGATAACTTTTATCAGAATCATAGGAGATATGTCAAGAGCCGGAGTGATGCACAGCTAAGAGATCCCAAAAAGGCAAATGACACCTCCACTTGTGATCCCGAGGGTACAGCAAATGGAATGGCAATTGTTCCTTGTGGTCTGATTGCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAGTAAGAACCTGCCAGTGGACAAGAAAAACATCTCTTGGAAGAGTGACAGGGAGCACAAATTTGG ] [+] EMBL CB621513 [ TTTCCCCTCCGCTTTATACACCCGCATCTCCAAATCTGAGGAGAGAGGGGAGAAGAAAAAGAAAGAAAAGCGCGCATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTTTTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTCCGGTGGATCCGGCGATGGCGGCGCGGCGGCGCCCAGGAGGAACACCAGGAAGCCCAAGTATTCCAAGTTTACTCAGCAGGAGCTCCCAGCTTGCAAGCCGATTCTTACTCCAAAATGGGTCATTTCAGTTTTCGTTCTTGTCGGAGTCATTTTTGTCCCAATCGGGCTTGTTTCGTTGAAGGCTTCACGAAAGGTTGTTGAGATTGTTGATCGATACGATGATGCATGTGTCCCAGCTAATACAACTGACAAGCTTGCTTACATCCAGAACCCAACAATAAGCAAAAACTGCAGAAGGACTCTTAAGGTTCCAAAGGATATGGATGCACCGATCTTTGTGTATTACCAGCTGGATAACTTTTATCAGAATCATAGGAGATATGTCAAGAGCCGGAGTGATGCACAGCTAAGAGATCCCAAAAAGGCAAATGACACCTCCACTTGTGATCCCGAGGGTACAGCAAATGGAATGGCAATTGTTCCTTGTGGTCTGATTGCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAGTAAGAACCTGCCAGTGGACAAGAAAGACATCTCTTGG ] [-] EMBL CB621514 [ AATTGTTCCTTGTGGTCTGATTGCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAGTAAGAACCTGCCAGTGGACAAGAAAGACATCTCTTGGAAGAGTGACAGGGAGCACAAATTTGGA CGTGAT GTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGAT CCAAATAAATCGTTGAGTGAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAA CACATATAGCTTTAGTGGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTAATAAGCTCTTCAAAC TTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAAAA TAGATATATACAGCCTTCTTTTGTTGAAAATTTTAAAaaaaaag ] [-] EMBL CB652310 [ TGTTCCTTGTGGTCTGATGNCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAGTAAGAACCTGCCAGTGGACAAGAAAAACATCTCTTGGAAGAGTGACAGGGAGCACAAATTTGGA CGTGAT GTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGAT CCAAATAAATCGTTGAGTAAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAA CACATATAGCTTTAGTGGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTAATAAGCTCTTCAAACTTTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAATA TATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTATAttgt ] [+] EMBL OSC17963 [ TTGGAAGAGTGACAGGGAGCACAAATTTGGA CGTGAT GTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGAT CCAAATAAATCGTTGAGTAAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGANCANCTACAG CACATATAGCTTTAGTGGCANAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTG ] [+] EMBL AU100757 [ AATTTGGACCGTGATGGTCTTCCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAANCACTTGATCCCAAAT AATCGTTGAGT AACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAA CACATATAGCTTTAGTGGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTAATAAGCTCTTCAAACTTTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAATA TATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTAAAAAAAA ] [-] EMBL CF313476 [ AACACTTGAT CCAAATAAATCGTTGAGTAAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAANCACATATAGCTTTAGTGGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTAATAAGCTCTTCAAACTTTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAATATTATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTAAAAAAAAA ] [+] EMBL C98341 [ AACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGCTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAATA TATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTATAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14077#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 646 fasta sequence [CGAGACAAGGGGGGGAGCACAAATTTGGACGTGATGTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGATCCAAATAAATCGTTGAGTGAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAACACATATAGCTTTAGTAGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTT-AATAAG-CTCTTCAAACTT-TAAGT-TGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGC-TTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAAAAAATATATACAGCCTTCTT] [+] EMBL CA767211 [CGAGACAAGGGGGGGAGCACAAATTTGGACGTGATGTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACTTGATCCAAATAAATCGTTGAGTGAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGCACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACACCATTACGGTGACATTGGAGAACAACTACAACACATATAGCTTTAGTAGCAAAAAGAAGTTGGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCTCAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAAACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTT AATAAG CTCTTCAAACTT TAAGT TGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGGC TTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAAAAAAAATATATACAGCCTTCTT] [+] EMBL BI809402 [ CATGGAACAGAAACCCTGCA GCCGTTGAATAAGCCTCTTCAAACTTGTAAGTGTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATAGCGTTGTTATTTGTTA CCGTGCTGGAGT CCAATACGGCATTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAG AAAAAAAATATAT ] consensusID : consensus_14077#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 264 fasta sequence [CCTCAGCCCGTTAATAAGCTCTTCAAACTTTAATTCCAAATTCAACATGAACACAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATACGTTTTATTTGTTACCTGCCTGGAGTCCCCATACGGCTTATACCACATTAGGCAGCGTTTATGACACACACTGATGTACATTATGTTCACAAGAAAAAAAAATATATCACACCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTATAAAAA] [+] EMBL BI800800 [CCTCAGCCCGTTAATAAGCTCTTCAAACTTTAATTCCAAATTCAACATGAACACAGTTGGATTATGGATTCAAATGTATCTTGTACTAGATACGTTTTATTTGTTACCTGCCTGGAGTCCCCATACGGCTTATACCACATTAGGCAGCGTTTATGACACACACTGATGTACATTATGTTCACAAGAAAAAAAAATATATCACACCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGGAATGATTTTTATAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14077#0 TCAAGAAGAAAAATAATTAATTACTCGCAGCAAAGGACGGACAGTTTCCTGCGCAAATTC 60 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 CACGTTCCACCTTCCTCTTCGGTCGTCTCCGCCGGCTTGGAGTTGGGAGAAGAAGCTCAA 120 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 ACGCGGAGGCCACCACGACCACCACAACACCACCACCTCTTCTCCTAGTCAAACCCACCC 180 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TTCCCTTGTAATCTTCGCAACAACAGCAGGACGGCAAGTTCGTAGCTTTCCCCTCCGCTT 240 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TATACACCCGCATCTCCAAATCTGAGGAGAGAGGGGAGAAGATAAAGAAAGAAAAGCGCG 300 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 CATTTTGGTGTCCGGGGAAGGGAAAAGGGCGGTTCTTGGCGTCGGTGGCGGGTTTTGTTT 360 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TTTGGGGGTGGAAGCGGTTGGTTTGGGGATGAGCAGCGGCCAGGAAGCCGGATCGAGCTC 420 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 CGGTGGATCCGGCGATGGCGGCGCGGCGGCGCCCAGGAGGAACACCAGGAAGCCCAAGTA 480 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TTCCAAGTTTACTCAGCAGGAGCTCCCAGCTTGCAAGCCGATTCTTACTCCAAAATGGGT 540 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 CATTTCAGTTTTCGTTCTTGTCGGAGTCATTTTTGTCCCAATCGGGCTTGTTTCGTTGAA 600 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 GGCTTCACGAAAGGTTGTTGAGATTGTTGATCGATACGATGATGCATGTGTCCCAGCTAA 660 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TACAACTGACAAGCTTGCTTACATCCAGAACCCAACAATAAGCAAAAACTGCAGAAGGAC 720 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TCTTAAGGTTCCAAAGGATATGGATGCACCAATCTTTGTGTATTACCAGCTGGATAACTT 780 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TTATCAGAATCATAGGAGATATGTCAAGAGCCGGAGTGATGCACAGCTAAGAGATCCCAA 840 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 AAAGGCAAATGACACCTCCACTTGTGATCCCGAGGGTACAGCAAATGGAATGGCAATTGT 900 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TCCTTGTGGTCTGATTGCATGGAGCATATTCAATGATACATATGGCTTTGTTCGCAACAG 960 consensus_14077#1 ------------------------------------------------------------ consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TAAGAACCTGCCAGTGGACAAGAAAAACATCTCTTGGAAGAGTGACAGGGAGCACAAATT 1020 consensus_14077#1 -----------------------------------CGAGACAAGGGGGGGAGCACAAATT 25 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TGGACGTGATGTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACT 1080 consensus_14077#1 TGGACGTGATGTCTTTCCAAAGAACTTCCAGAATGGTTCTCTTATAGGTGGAAAAACACT 85 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 TGATCCAAATAAATCGTTGAGTAAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGC 1140 consensus_14077#1 TGATCCAAATAAATCGTTGAGTGAACAAGAAGACCTTATTGTTTGGATGAGAACTGCTGC 145 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 ACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACAC 1200 consensus_14077#1 ACTTCCAACATTCAGAAAGCTGTATGGTAGGATACACACTGACCTCAAGAAAGGTGACAC 205 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 CATTACGGTGACATTGGAGAACAACTACAACACATATAGCTTTAGTGGCAAAAAGAAGTT 1260 consensus_14077#1 CATTACGGTGACATTGGAGAACAACTACAACACATATAGCTTTAGTAGCAAAAAGAAGTT 265 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 GGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCT 1320 consensus_14077#1 GGTACTTTCTACCTCGACATGGCTCGGTGGAAAGAATGATTTTCTTGGTCTAGCATATCT 325 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 CAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAA 1380 consensus_14077#1 CAGTGTTGGTGGACTCTGCTTCTTCCTGGCATTTGCATTCACCTTGCTGTACTTGATAAA 385 consensus_14077#2 ------------------------------------------------------------ consensus_14077#0 ACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTA 1440 consensus_14077#1 ACCAAGGAAAATGGGTGACAACAACTACTTGTCATGGAACAGAAACCCTGCAGGCCGTTA 445 consensus_14077#2 -----------------------------------------------CCTCAGCCCGTTA 13 * *** ****** consensus_14077#0 ATAAGCTCTTCAAACTTTTAAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTC 1500 consensus_14077#1 ATAAGCTCTTCAAACTTT-AAGTTGCAAATTCAACATGAAGCAAGTTGGATTATGGATTC 504 consensus_14077#2 ATAAGCTCTTCAAACTTT--AATTCCAAATTCAACATGAACACAGTTGGATTATGGATTC 71 ****************** * ** *************** ***************** consensus_14077#0 AAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGG 1560 consensus_14077#1 AAATGTATCTTGTACTAGATAGCGGTTTTATTTGTTAGCCGTGCTGGAGTGCCAATACGG 564 consensus_14077#2 AAATGTATCTTGTACTAGATAC--GTTTTATTTGTTACCTGC-CTGGAGTCCCCATACGG 128 ********************* ************* * * ******* ** ****** consensus_14077#0 CTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAA 1620 consensus_14077#1 CTTATACCAATTAGGGCAGCGTTTATGAGCAACACTGATGTACATTATGTTGCAAAGAAA 624 consensus_14077#2 CTTATACCACATTAGGCAGCGTTTATGACACACACTGATGTACATTATGTTCACAAGAAA 188 ********* * ************** ******************** ****** consensus_14077#0 AATATATATATATACAGCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGG 1680 consensus_14077#1 AAAAAATATATA--CAGCCTTCTT------------------------------------ 646 consensus_14077#2 AAAAAATATATC-ACACCCTTCTTTTGTTGAAAATTTTAAATATCCCAGAAGTTAAATGG 247 ** * ****** ** ******* consensus_14077#0 AATGATTTTTATAAAAAAAAAAAAAAAAAAAAAAA 1715 consensus_14077#1 ----------------------------------- consensus_14077#2 AATGATTTTTATAAAAA------------------ 264 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||